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BioProject ID : KAP220244

Project title : Bioinformatics study for analyses of marine microbial genomes

Submitter

**Submitter**
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Name	Kim Kyung-mo
Organization	Korea Polar Research Institute (KOPRI)
Department	Division of Life Sciences

Date

**Date**
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Registration Date	2022-04-27

Project Design

**Project Design**
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NTIS Number	1525006100
Project Title	Bioinformatics study for analyses of marine microbial genomes
Relevance	environmental
Description	Development of bioinformatics pipelines for interpreting individual marine microbial genomes; Updating bioinformatics methods for analyzing NGS-driven marine microbial genomes; Methodology establishment for comparative study of marine microbial genomes; Understanding evolutionary mechanisms and niche adaptation of microbes using phylogenomic analysis
Project Data Type *	Whole Genome sequencing
Sample Scope *	Monoisolate

Hierarchy

**Hierarchy**
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Umbrella Project	-

Publications

**Publications**
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PubMed ID
DOI

Sample Group

BioSample Accession ID	Project Title	Sample Type	Registration Date
KASG220455	Shewanella japonica	Microbe	2022-04-27

Submitter’s other BioProjects

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BioProject Accession ID	Project Title	Sample Scope	Project Data Type	Registration Date
KAP220260	Genome Analysis of Marine Organisms and Development of Functional Applications	Environment	Metagenome	2022-04-27
KAP210017	Genome analysis of Fisheries organisms	Multiisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2021-02-03
KAP220237	Bioinformatics study for analyses of marine microbial genomes	Monoisolate	Whole Genome sequencing	2022-04-27
KAP220220	Genome Analysis of Marine and Fisheries Organisms and Development of Functional Application	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-04-26
KAP220254	Comparative Study on Domestic Skate Species Using Genome Information	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-04-27
KAP220238	Genome analysis for marine plants and its application study	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-04-26
KAP220257	Comparative Study on Domestic Skate Species Using Genome Information	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-04-27
KAP210030	The development of kit for screening of cancer related target genes with high sensitivity in the liquid biopsy	Multiisolate	Targeted Locus (Loci)	2021-03-04
KAP220243	Analysis and Development of Application Platform of Valuable Marine Microbial Genome	Monoisolate	Whole Genome sequencing	2022-04-27
KAP220227	Genome analysis of fisheries organisms	Monoisolate	Whole Genome sequencing	2022-04-26
KAP220274	Analysis and Development of Application Platform of Valuable Marine Microbial Genome	Monoisolate	Whole Genome sequencing	2022-04-27
KAP220242	Genome analysis for marine plants and its application study	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-04-26
KAP210022	Establishment of reference genome of Marine organisms	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2021-02-03
KAP220208	Marine animal genome information analysis and utilization-based research	Multiisolate	Whole Genome sequencing	2022-04-26
KAP220252	Genome Analysis of Marine Organisms and Development of Functional Applications	Environment	Metagenome	2022-04-26
KAP220248	Genome analysis for marine plants and its application study	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-04-26
KAP220215	Genome analysis of marine bacteria and development of functional application	Monoisolate	Whole Genome sequencing	2022-04-26
KAP210027	Genome Analysis of Marine Animals	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2021-02-03
KAP220236	Research based on analysis and utilization of marine aquatic organisms genome information	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-04-26
KAP220223	Construction and analysis of the 3rd generation of reference genomes of marine animals	Monoisolate	Whole Genome sequencing	2022-04-26
KAP220234	Genome analysis of aquatic organisms and development of functional applications	Monoisolate	Whole Genome sequencing	2022-04-26
KAP220225	Establishment of reference genome of Marine organisms	Monoisolate	Whole Genome sequencing	2022-04-26
KAP210044	Genome analysis of Fisheries organisms	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2021-08-04
KAP220266	Marine animal genome analysis research	Multiisolate	Whole Genome sequencing	2022-04-26
KAP220337	Mining of novel biomaterials	Monoisolate	Transcriptome or Gene Expression	2022-05-03
KAP220263	Genome analysis of Fisheries organisms	Monoisolate	Whole Genome sequencing	2022-04-26
KAP220380	Functional microbial genome analysis of fermented foods and discovery of useful genes	Multi-species	Whole Genome sequencing,Metagenome	2022-07-11
KAP220228	Genome analysis for marine plants and its application study	Monoisolate	Whole Genome sequencing	2022-04-26
KAP220216	Genome analysis for marine plants and its application study	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-04-26
KAP220224	Genome Analysis of Marine Animals	Monoisolate	Whole Genome sequencing	2022-04-26
KAP220452	Genome analysis of marine bacteria and development of functional application	Monoisolate	Whole Genome sequencing	2022-07-27
KAP210018	Genome analysis for marine plants and its application study	Monoisolate	Whole Genome sequencing	2021-02-03
KAP220458	Genome analysis of aquatic organisms and development of functional applications	Monoisolate	Whole Genome sequencing	2022-07-27
KAP220261	Genome analysis of aquatic organisms and development of functional applications	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-04-27
KAP220374	Genomics based research on industrializationof valuable microbes originated in traditional Nuruk	Multi-species	Whole Genome sequencing	2022-07-11
KAP220221	Genome Analysis of Marine Organisms and Development of Functional Applications	Environment	Metagenome	2022-04-26
KAP220273	Detailed Task C1_Joint 1_ Marine Microorganisms Genomic Information Analysis and Utilization of the Foundation	Monoisolate	Whole Genome sequencing	2022-04-27
KAP220251	Bioinformatics study for analyses of marine microbial genomes	Monoisolate	Whole Genome sequencing	2022-04-27
KAP220258	Genome Analysis of Marine Organisms and Development of Functional Applications	Environment	Metagenome	2022-04-26
KAP220232	Establishment of reference genome of Marine organisms	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-04-26
KAP220456	Mining of novel biomaterials	Multiisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-07-27
KAP220217	Genome analysis of marine bacteria and development of functional application	Monoisolate	Whole Genome sequencing	2022-04-26
KAP210046	Genome Analysis of Marine Animals	Monoisolate	Whole Genome sequencing	2021-08-04
KAP220323	Whole genome analysis in marine animals/ comparative genomics/ phylogenomics	Monoisolate		2022-05-02
KAP220385	NGS-based microbial genome analysis for companion animals	Monoisolate	Whole Genome sequencing	2022-07-11
KAP210041	Analysis of genomes, transcriptomes and intestinal microorganisms of pond smelt	Multiisolate,Environment	Whole Genome sequencing,Transcriptome or Gene Expression,Gut/Skin Microbiome	2021-08-04
KAP220247	Genomics of thermophilic acetogen Moorella thermoacetica	Multiisolate	Whole Genome sequencing	2022-04-26
KAP220457	Genome analysis for marine plants and its application study	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-07-27
KAP210026	Establishment of reference genome of Marine organisms	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2021-02-03
KAP210043	NA	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2021-08-04
KAP220253	Analysis of genomic information of marine aquatic organisms and establishment of the foundation for utilization (R&D)	Multiisolate	Whole Genome sequencing	2022-04-26
KAP220240	Bioinformatics study for analyses of marine microbial genomes	Monoisolate	Whole Genome sequencing	2022-04-27
KAP220226	Genome analysis of marine bacteria and development of functional application	Monoisolate	Whole Genome sequencing	2022-04-26
KAP220267	Comparative Study on Domestic Skate Species Using Genome Information	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-04-27
KAP210025	Analysis and Development of Application Platform of Valuable Marine Microbial Genome	Monoisolate	Whole Genome sequencing	2021-02-03
KAP210024	Genome Analysis of Marine and Fisheries Organisms and Development of Functional Application	Multiisolate,Environment	Whole Genome sequencing,Transcriptome or Gene Expression,Gut/Skin Microbiome	2021-02-03
KAP220278	Establishment of reference genome of Marine organisms	Monoisolate	Whole Genome sequencing	2022-04-28
KAP210023	Establishment of reference genome of Marine organisms	Monoisolate	Whole Genome sequencing	2021-02-03
KAP220264	Research on the analysis and application of genetic information on marine animals	Multiisolate	Whole Genome sequencing	2022-04-27
KAP220259	Genome analysis of Fisheries organisms	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-04-27
KAP220211	Genome of Microbes from a Marine Invertebrate species	Discovering and utilizing genes related to physiological activity among useful microorganisms such as marine life-derived microorganisms and lava seawater	Genome analysis of useful microorganisms isolated from marine invertebrates, etc. and their application studies	2022-04-26
KAP210045	Genome Analysis of Marine Animals	Monoisolate	Whole Genome sequencing	2021-08-04
KAP220454	Genome analysis of aquatic organisms and development of functional applications	Monoisolate	Whole Genome sequencing	2022-07-27
KAP220249	Genome analysis of aquatic organisms and development of functional applications	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-04-26
KAP220250	Genome analysis of marine bacteria and development of functional application	Monoisolate	Whole Genome sequencing	2022-04-27
KAP220382	Complete reference and comparative genomics analysis of useful filamentous fungi for agriculture and food industry	Monoisolate	Whole Genome sequencing	2022-07-11
KAP220222	Genome analysis of Fisheries organisms	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-04-26
KAP220262	Genome analysis of Fisheries organisms	Monoisolate	Whole Genome sequencing	2022-04-26
KAP220218	Ministry of Oceans and Fisheries	Multiisolate	Whole Genome sequencing	2022-04-27
KAP220255	Genome Analysis of Marine Organisms and Development of Functional Applications	Environment	Metagenome	2022-04-26
KAP220256	Comparative Study on Domestic Skate Species Using Genome Information	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-04-27
KAP220269	Construction of Analysis and application of marine aquaculture genome information	Environment	Metagenome	2022-04-27
KAP220265	Marine animal genome analysis research	Multiisolate	Whole Genome sequencing	2022-04-26
KAP220276	Analysis and Development of Application Platform of Valuable Marine Microbial Genome	Monoisolate	Whole Genome sequencing	2022-04-28
KAP220246	Genome of Microbes from a Marine Invertebrate species	Genomic study related to the physiological activity of marine microorganisms isolated from Jeju lava seawater	Genome analysis of microorganisms useful for separation of lava seawater	2022-04-27
KAP220235	Establishment of reference genome of Marine organisms	Monoisolate	Whole Genome sequencing	2022-04-27
KAP210021	Genome Analysis of Marine Animals	Multi-species	Whole Genome sequencing,Transcriptome or Gene Expression	2021-02-03
KAP220233	Genome analysis of aquatic organisms and development of functional applications	Monoisolate	Whole Genome sequencing	2022-04-26
KAP220244	Bioinformatics study for analyses of marine microbial genomes	Monoisolate	Whole Genome sequencing	2022-04-27
KAP220231	Genome analysis of Fisheries organisms	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-04-26
KAP220275	Analysis and Development of Application Platform of Valuable Marine Microbial Genome	Monoisolate	Whole Genome sequencing	2022-04-27
KAP210020	Genome Analysis of Marine and Fisheries Organisms and Development of Functional Application	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2021-02-03
KAP210019	Genome analysis for marine plants and its application study	Monoisolate	Whole Genome sequencing	2021-02-03
KAP210042	Genome Analysis of Marine Animals	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2021-08-04
KAP220241	Genome analysis for marine plants and its application study	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-04-27
KAP210047	Genome analysis of fisheries organisms	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2021-08-04
KAP220230	Genome Analysis of Marine Organisms and Development of Functional Applications	Environment	Metagenome	2022-04-26
KAP220453	Comparative Study on Domestic Skate Species Using Genome Information	Monoisolate	Transcriptome or Gene Expression	2022-07-27
KAP220245	Establishment of reference genome of Marine organisms	Monoisolate	Whole Genome sequencing	2022-04-27
KAP220219	Genome Analysis of Marine Animals	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-04-26
KAP220272	Analysis and Development of Application Platform of Valuable Marine Microbial Genome	Monoisolate	Whole Genome sequencing	2022-04-27
KAP220229	Genome analysis for marine plants and its application study	Monoisolate	Whole Genome sequencing	2022-04-26
KAP220455	Marine animal genome analysis research	Multiisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-07-27

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Browse BioProject

Summary 내용시작

Submitter

Date

Project Design

Hierarchy

Publications

Relations 내용시작

Sample Group

Submitter’s other BioProjects