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BioProject ID : KAP220183

Project title : Data Center for Genomic Medicine

Submitter

**Submitter**
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Name	Kim Hyung Lae
Organization	Ewha University-Industry Collaboration Foundation
Department	Department of Biochemistry

Date

**Date**
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Registration Date	2022-04-12

Project Design

**Project Design**
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NTIS Number	-
Project Title	Data Center for Genomic Medicine
Relevance	medical
Description	"○ Support for integration and analysis of genomic data such as NGS produced in the multi-ministerial genome project Standardization of raw data, primary and secondary processing, and integrated genome resource DB are established by targeting genome resources that can be open and shared cooperative research for detailed tasks of the genome business. ○ Support for high-performance computer-based cooperative research Platform and analysis service (genome farm) operation for advanced utilization of integrated resources Establishment of cooperative system through integrated genomic resource and human resource consortium ○ Education to strengthen the capabilities of human genome analysis researchers in customized medical care (training using high-performance computers, etc.) ○ International cooperation research in cloud environment Participation in clinical genome research based on international cooperation to verify platform effectiveness (pan-caner project) Supports international level convergence research by producing and analyzing data necessary for disease genome research ○ Expand support for disease genomic research Derivation of analysis results for phase estimation and recombination through WGS analysis of 3 or more extended households Support for HPC-based meta-research and support for confirmation and expansion of disease genomic research"
Project Data Type *	Transcriptome or Gene Expression
Sample Scope *	Multiisolate

Hierarchy

**Hierarchy**
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Umbrella Project	-

Publications

**Publications**
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PubMed ID
DOI

Sample Group

BioSample Accession ID	Project Title	Sample Type	Registration Date
KASG220280	Discovery of cancer-related candidate genes by analyzing genomic mutations in intractable lung cancer disease	Human sample	2022-04-12
KASG220295	Identification of genetic variants in obesity	Human sample	2022-04-12
KASG220281	Blood cancer (AML) whole genome sequencing	Human sample	2022-04-12
KASG220287	Gut metagenome study of Parkinson disease	Human sample	2022-04-12
KASG220257	Path to the obese phenotype through the interaction of personality genome, brain region(MRI), behavior-diet and gut microbiome	Human sample	2022-04-12
KASG220284	A study on the discovery of genes affecting the onset and clinical phenotype of chronic obstructive pulmonary disease in Koreans through genotype analysis	Human sample	2022-04-12
KASG220265	Whole genome sequencing on blood cancer	Human sample	2022-04-12
KASG220294	Identification of Genetic Variants in Parkinson disease	Human sample	2022-04-12
KASG220289	Whole genome-sequencing for multiple myeloma	Human sample	2022-04-12
KASG220249	Trio Phasing Study	Human sample	2022-04-12
KASG220268	Whole genome sequencing on lung cancer	Human sample	2022-04-12
KASG220263	Identification of genetic variants associated with health screening examination phenotypes, behavioral and personality traits by genomic collaboration under the HPC platform	Human sample	2022-04-12
KASG220262	Characterization of blood metagenome by 16S amplicon sequencing	Human sample	2022-04-12
KASG220285	Characterization of blood metagenome by 16S amplicon sequencing	Human sample	2022-04-12
KASG220250	Blood Cancer Genetic Variation Analysis	Human sample	2022-04-12
KASG220245	Whole genome sequencing of lung cancer	Human sample	2022-04-12
KASG220270	Characterization of blood metagenome by 16S amplicon sequencing	Human sample	2022-04-12
KASG220261	Discovery of specific genetic changes in wild type EGFR lung adenocarcinoma patients	Human sample	2022-04-12
KASG220264	Discovering new disease progression factors through genomic analysis related to disease progression in patients with intractable malignant blood disease	Human sample	2022-04-12
KASG220273	Acute myeloid leukemia customized medical clinical translational study	Human sample	2022-04-12
KASG220277	Identification of the genetic cause, molecular diagnosis, and customized treatment method through the establishment of large-scale whole exome data of Charcot-Marie-Tooth disease	Human sample	2022-04-12

Submitter’s other BioProjects

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BioProject Accession ID	Project Title	Sample Scope	Project Data Type	Registration Date
KAP220397	Development of Diagnostic Methods for Diabetes in High Risk Population Using Genetic and Proteomic Approach	Multiisolate	Exome	2022-07-26
KAP220193	Identification and validation of predictive markers of epilepsy susceptibility and therapeutic response by development of genome data analysis technology optimized to multifactorial diseases	Multiisolate	Exome	2022-04-12
KAP220401	Development of genetic biomarkers for early diagnosis and personalized medicine of precocious puberty	Multiisolate	Whole Genome sequencing	2022-07-26
KAP220190	Development of open innovation analysis platform for clinical cancer genome data	Multiisolate	Transcriptome or Gene Expression	2022-04-12
KAP220200	Development of personalized diagnosis and therapeutics for dark matters using somatic mutations in patient-derived tumor xenograft models maintaining tumor microenvironment.	Multiisolate	Exome	2022-04-12
KAP220195	Diagnostics to predict the progression of diabetic nephropathy using urinary exosomal microRNA	Multiisolate	Transcriptome or Gene Expression	2022-04-12
KAP220189	Identification of somatic mutations in malformed brain inducing epilepsy and development of diagnostic technology by using next generation sequencing	Multiisolate	Exome	2022-04-12
KAP220185	Development of high performance multiplex diagnostic technique and its clinical validation for genomic biomarkers in lung cancer	Multiisolate	Targeted Locus (Loci)	2022-04-12
KAP220192	International collaborative study on cancer onset mechanism of of Lysosomal Storage Disorder(LSD) by using epigenome data	Multiisolate	Targeted Locus (Loci)	2022-04-12
KAP220194	Development of thyroid cancer diagnostic system and therapeutics based on integrative genomic-epigenomic analysis	Multiisolate	Transcriptome or Gene Expression	2022-04-12
KAP220199	Development of Pharmacogenomic Target Sequencing Panel and Its Application to Precision Medicine	Multiisolate	Targeted Locus (Loci)	2022-04-12
KAP220196	Breast cancer prognosis predictive gene selection and expression analysis	Multiisolate	Transcriptome or Gene Expression	2022-04-12
KAP220186	Production of sequencing data and the assessment of the performance of high-performance cancer genome analysis software for certification of their clinical application	Multiisolate	Whole Genome sequencing	2022-04-12
KAP220183	Data Center for Genomic Medicine	Multiisolate	Transcriptome or Gene Expression	2022-04-12
KAP220191	Establishment and validation of drug sensitivity and resistance prediction models using PDTX-derived cancer whole-exome and transcriptome sequencing	Multiisolate	Transcriptome or Gene Expression	2022-04-12
KAP220402	Microbiome-based intestinal environment improvement effect verification and correlation analysis with intestinal flora	Environment	Metagenome	2022-07-26
KAP220396	Identification of RNA variant-based subtypes and prognostic markers in liver cancers	Multiisolate	Epigenomics	2022-07-26
KAP220399	Development of panel classifying molecular subtypes to discover therapeutic targets in triple-negative breast cancer	Multiisolate	Transcriptome or Gene Expression	2022-07-26
KAP220188	Validation of predictive biomarker for regorafenib response in metastatic colorectal cencer	Multiisolate	Exome	2022-04-12
KAP220197	Identification and validation of personalized gastric cancer biomarkers with disabled drug response induced by copy number variations, gene expression alterations, and fusion genes elucidated by genome and transcriptome sequencing	Multiisolate	Exome	2022-04-12
KAP220398	Development of Pharmacogenomic Target Sequencing Panel and Its Application to Precision Medicine	Multiisolate	Targeted Locus (Loci)	2022-07-26
KAP220198	Development of high-precision and high-performance multiomics cancer genome analysis software for targeted therapeutics and certification for clinical application	Multiisolate	Whole Genome sequencing	2022-04-12
KAP220184	Identification and functional analysis of targeted therapeutic marker for malignant lymphoma	Multiisolate	Whole Genome sequencing	2022-04-12
KAP220400	Development of thyroid cancer diagnostic system and therapeutics based on integrative genomic-epigenomic analysis	Multiisolate	Transcriptome or Gene Expression	2022-07-26
KAP220395	Identification and functional analysis of targeted therapeutic marker for malignant lymphoma	Multiisolate	Whole Genome sequencing	2022-07-26

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Summary 내용시작

Submitter

Date

Project Design

Hierarchy

Publications

Relations 내용시작

Sample Group

Submitter’s other BioProjects