KoNA

KoNA SEARCH

Browse BioProject

BioProject ID : KAP220377

Project title : Microbial reference genome sequencing and comparative genomic analysis for agriculture and food

Submitter

**Submitter**
Submitter를 안내합니다.
Name	Shin Jae-Ho
Organization	Kyungpook National University
Department	Applied Biosciences

Date

**Date**
Date를 안내합니다.
Registration Date	2022-07-11

Project Design

**Project Design**
Project Design를 안내합니다.
NTIS Number	1545023006
Project Title	Microbial reference genome sequencing and comparative genomic analysis for agriculture and food
Relevance	agricultural
Description	Microbial reference genome sequencing and comparative genomic analysis for agriculture and food
Project Data Type *	Whole Genome sequencing
Sample Scope *	Monoisolate

Hierarchy

**Hierarchy**
Hierarchy를 안내합니다.
Umbrella Project	-

Publications

**Publications**
Publications를 안내합니다.
PubMed ID
DOI

Sample Group

BioSample Accession ID	Project Title	Sample Type	Registration Date
KASG220748	Bifidobacterium longum subsp. infantis JCM 7007	Microbe	2022-07-13
KASG220745	Whole genome of Streptococcus sinensis LPB 0410	Microbe	2022-07-13
KASG220743	Whole genome of Rothia dentocariosa LPB 0409	Microbe	2022-07-13
KASG220740	Whole genome of Streptococcus oralis subsp. dentisani LPB 0408	Microbe	2022-07-13
KASG220747	Whole genome of Bifidobacterium longum subsp. suillum KCTC 15605	Microbe	2022-07-13
KASG220751	whole genome sequencing of Lactobacillus animalis KCTC 3501T	Microbe	2022-07-13
KASG220753	Genome sequencing of Lactobacillus crispatus KCTC 5054T	Microbe	2022-07-13
KASG220746	Whole genome of Granulicatella adiacens LPB 0411	Microbe	2022-07-13
KASG220738	Whole genome sequence of Pseudomonas sp. KNUC 1026	Microbe	2022-07-13
KASG220735	Whole genome sequence of Microbacterium sp. KUDC 405	Microbe	2022-07-13
KASG220719	Whole genome of Streptococcus parasanguinis LPB 0407	Microbe	2022-07-13
KASG220701	Whole genome of Streptococcus infantis LPB 0403	Microbe	2022-07-13
KASG220704	Whole genome sequence of Paenibacillus sonchi LMG 24727	Microbe	2022-07-13
KASG220690	Whole genome of Neisseria sicca LPB 0402	Microbe	2022-07-13
KASG220712	Whole genome sequence of Azospirillum doebereinerae KACC 13198	Microbe	2022-07-13
KASG220732	Whole genome sequence of Streptomyces sp. T14	Microbe	2022-07-13
KASG220730	Whole genome sequence of Flavobacterium anhuiense T4	Microbe	2022-07-13
KASG220731	Whole genome sequence of Bacillus firmus T8	Microbe	2022-07-13
KASG220734	Whole genome sequence of Carnobacterium viridans DC01	Microbe	2022-07-13
KASG220723	Whole genome sequence of Bacillus aryabhattai GW320	Microbe	2022-07-13
KASG220714	Whole genome sequence of Bacillus subtilis SH-1	Microbe	2022-07-13
KASG220710	Whole genome sequence of Paenibacillus xylanilyticus KACC 15580	Microbe	2022-07-13
KASG220737	Whole genome sequence of Spirosoma sp. KNUC 1025	Microbe	2022-07-13
KASG220733	Whole genome sequence of Pseudomonas frederiksbergensis A6	Microbe	2022-07-13
KASG220736	Whole genome sequence of Microbacterium sp. KUDC 406	Microbe	2022-07-13
KASG220696	Whole genome sequence of Sphingobacterium nematocida DSM 24091	Microbe	2022-07-13
KASG220716	Whole genome of Streptococcus mitis LPB 0406	Microbe	2022-07-13
KASG220713	Whole genome of Rothia mucilaginosa LPB 0405	Microbe	2022-07-13
KASG220707	Whole genome of Streptococcus rubneri LPB 0404	Microbe	2022-07-13
KASG220718	Whole genome sequencing of Bifidobacterium longum subsp. longum JCM 11342 with PacBio RSII	Microbe	2022-07-12
KASG220711	Whole genome of Bifidobacterium longum subsp. longum JCM 7053	Microbe	2022-07-12
KASG220685	Whole genome sequence of Azotobacter ameniacus DSM 2284 with PacBio sequel	Microbe	2022-07-12
KASG220722	Bifidobacterium longum subsp. infantis JCM 7011	Microbe	2022-07-12
KASG220729	Whole genome seqeuncing of Rothia aeria LPB 0401	Microbe	2022-07-12
KASG220728	Whole genome sequencing of Neisseria perflava LPB 0400	Microbe	2022-07-12
KASG220726	Whole genome of Bifidobacterium longum subsp. whole genome of suillum JCM 19995	Microbe	2022-07-12
KASG220720	Bifidobacterium longum subsp. infantis JCM 7009	Microbe	2022-07-12
KASG220721	Bifidobacterium longum subsp. infantis JCM 7010	Microbe	2022-07-12
KASG220727	Whole genome sequencing of Bifidobacterium longum subsp. longum KCTC 3128	Microbe	2022-07-12
KASG220695	Whole genome sequence of Paenibacillus sophorae DSM 23020	Microbe	2022-07-12
KASG220699	Marinobacter sp. LPB0319	Microbe	2022-07-12
KASG220703	Bifidobacterium longum subsp. longum KCTC 3421 whole genome	Microbe	2022-07-12
KASG220706	whole genome of Bifidobacterium saguini DSM 23967	Microbe	2022-07-12

Submitter’s other BioProjects

Show

BioProject Accession ID	Project Title	Sample Scope	Project Data Type	Registration Date
KAP220336	Genomic analysis of thrips-pathogenic Beauveria bassiana	Monoisolate	Whole Genome sequencing	2022-05-03
KAP220280	Development of valuable wood forming genetic resources through Evo-Devo genomics research	Monoisolate	Transcriptome or Gene Expression	2022-05-02
KAP220409	Whole genome sequencing of sweetpotato (Ipomoea batatas).	Monoisolate	Whole Genome sequencing	2022-07-27
KAP220433	Development of new control measures against bovine Johne	Multi-species	Whole Genome sequencing,Transcriptome or Gene Expression	2022-07-27
KAP220302	Metagenomic analysis of beneficial microbial communities in crops and foods	Multi-species	Metagenome	2022-05-02
KAP220384	Metagenome information and system analysis of agricultural and fermented food environments	Environment	Metagenome	2022-07-11
KAP220309	Discovering useful genetic resources based on multi-omics of useful microorganisms for agriculture and food and developing technology to enhance value	Synthetic	Whole Genome sequencing	2022-05-02
KAP220300	Functional microbial genome analysis of fermented foods and discovery of useful genes	Multi-species	Whole Genome sequencing,Metagenome	2022-05-02
KAP220423	De novo sequencing of Senna tora (L.) Roxb. genome	Monoisolate	Whole Genome sequencing	2022-07-27
KAP220434	Functional analysis of microorganisms based on genome-based fermented foods and immunity test	Environment	Whole Genome sequencing,Metagenome	2022-07-27
KAP220422	Analysis of transcriptome and funcitonal metabolites from Senna tora (L.) Roxb.	Monoisolate	Transcriptome or Gene Expression	2022-07-27
KAP220426	Anaysis of genome structure and bioinformation in perilla	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-07-27
KAP220408	Whole genome sequencing of sweetpotato (Ipomoea batatas).	Monoisolate	Whole Genome sequencing	2022-07-27
KAP220320	NGS-based microbial genome analysis for companion animals	Multi-species	Whole Genome sequencing,Metagenome	2022-05-02
KAP220447	Discovering useful genetic resources based on multi-omics of useful microorganisms for agriculture and food and developing technology to enhance value	Synthetic	Whole Genome sequencing	2022-07-27
KAP220328	Construction of genetic map and genome structure analysis of Perilla frutescens (L.) var. frutescens	Monoisolate	Whole Genome sequencing	2022-05-03
KAP220440	Genomics based research on industrializationof valuable microbes originated in traditional Nuruk	Multi-species	Whole Genome sequencing	2022-07-27
KAP220332	De novo sequencing and transcriptome analysis of tea plant	Monoisolate	Transcriptome or Gene Expression	2022-05-03
KAP220314	Genome sequencing and gene expression analysis of Protaetia brevitarsis seulensis	Monoisolate	Whole Genome sequencing	2022-05-02
KAP220377	Microbial reference genome sequencing and comparative genomic analysis for agriculture and food	Monoisolate	Whole Genome sequencing	2022-07-11
KAP220437	Development of microbiological agent for immune enhancement based on microbiome in dogs and cats	Multi-species	Whole Genome sequencing	2022-07-27
KAP220297	Microbiome-based intestinal environment improvement effect verification and correlation analysis with intestinal flora	Multiisolate	Metagenome	2022-05-02
KAP220303	Functional, system-level study of rice microbiome using meta-transcriptomics and network analysis	Multi-species	Metagenome	2022-05-02
KAP220316	Development of molecular markers for identification of agricultural traits and discovery of medicinal components-related genes	Monoisolate	Transcriptome or Gene Expression	2022-05-02
KAP220383	Development of probiotic materials for ameliorating stress and type 2 diabetes using microbiome analysis	Multi-species	Whole Genome sequencing,Metagenome	2022-07-11
KAP220298	Porcine, bovine, and canine gut microbiome analysis to develop a health management strategy	Environment	Metagenome	2022-05-02
KAP220442	Multi-omics based gene function network analysis of food and agricultural microorganisms	Monoisolate	Transcriptome or Gene Expression	2022-07-27
KAP220289	Whole Genome sequencing,Transcriptome or Functional analysis	Multi-species	Whole Genome sequencing,Transcriptome or Gene Expression,Functional analysis	2022-05-02
KAP220319	Pathogenomics analysis of the airborne fungal pathogens in red peppe	Monoisolate	Transcriptome or Gene Expression	2022-05-02
KAP220410	De novo sequencing of the bellflower genome	Monoisolate	Whole Genome sequencing	2022-07-27
KAP220339	NGS-based large-scale dielectric analysis	Environment	Metagenome	2022-05-03
KAP220299	Investigation of health functionalities of kimchi probiotics in vivo"	Multi-species	Whole Genome sequencing,Metagenome	2022-05-02
KAP220321	Deciphering rice microbiomes for the improvement of productivity and sustainability	Environment	Metagenome	2022-05-02
KAP220335	Microbial reference genome sequencing and comparative genomic analysis for agriculture and food	Multi-species	Whole Genome sequencing	2022-05-03
KAP220284	Artificial intelligence (AI)-based genomics and its application	Monoisolate	Whole Genome sequencing	2022-05-02
KAP220431	Microbiome-based intestinal environment improvement effect verification and correlation analysis with intestinal flora	Environment	Metagenome	2022-07-27
KAP220307	Development of new control measures against bovine Johne	Multiisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-05-02
KAP220424	Fine Genetic Mapping and Contig Anchoring of Allium cepa and Chrysanthemum boreale	Monoisolate	Whole Genome sequencing	2022-07-27
KAP220285	Genome assembly and development of useful genes	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-05-02
KAP220327	A study of draft genome construction	Monoisolate	Whole Genome sequencing	2022-05-03
KAP220301	Metagenomics and Metabolomics for Agricultural Microbiome	Multi-species	Whole Genome sequencing,Metagenome	2022-05-02
KAP220430	Metagenomics and Metabolomics for Agricultural Microbiome	Environment	Whole Genome sequencing,Metagenome	2022-07-27
KAP220291	Development of useful genetic markers resource	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-05-02
KAP220390	Genomics based research on industrializationof valuable microbes originated in traditional Nuruk	Multi-species	Whole Genome sequencing	2022-07-14
KAP220330	Comparative genomics and genotype analysis of sesame	Monoisolate	Whole Genome sequencing	2022-05-03
KAP220378	Development of Raman based cell detechment technology for high-throughput single cell sorting and its genomics	Multi-species	Whole Genome sequencing,Metagenome	2022-07-11
KAP220375	Culture Collection of Multifunctional Novel Bacteria with Biocontrol Effects using Microbial Culturomics	Multi-species	Whole Genome sequencing,Metagenome	2022-07-11
KAP220283	Wild watermelon genome assembly and comparative genomics study	Monoisolate	Whole Genome sequencing	2022-05-02
KAP220290	Genetic/transcriptional analysis and biomarker discovery in Mycobacterium avium subsp. paratuberculosis strains	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-05-02
KAP220338	Functional analysis of microorganisms based on genome-based fermented foods and immunity test	Environment	Metagenome	2022-05-03
KAP220406	Development of Immuno-modulating Mixture to Control the Incidence of Chronic and Acute Diarrhea of Pig through Utilizing Microbial Genome Information	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-07-27
KAP220435	A study on the mechanism of suppressing odor through genome analysis of functional microorganisms and analysis of intestinal flora and metabolites of pigs	Environment	Whole Genome sequencing,Metagenome	2022-07-27
KAP220333	Introduction of genome information enhancement system and support for NGS analysis	Monoisolate	Whole Genome sequencing	2022-05-03
KAP220445	Development of Disease-customized Probiotics for Infection Control and Inflammation Relief	Multi-species	Whole Genome sequencing	2022-07-27
KAP220310	Metagenomic analysis of Economic Animals	Multi-species	Metagenome	2022-05-02
KAP220428	Completion of the Pinus densiflora reference genome	Monoisolate	Transcriptome or Gene Expression	2022-07-27
KAP220381	Kimchi probiotics development and health function kimchi industrialization	Multi-species	Whole Genome sequencing,Metagenome	2022-07-11
KAP220388	Porcine, bovine, and canine gut microbiome analysis to develop a health management strategy	Environment	Metagenome	2022-07-13
KAP220404	(Different from NTIS information) Reference dielectric and ohmix information analysis research of agricultural useful eukaryotic microorganisms	Monoisolate	Transcriptome or Gene Expression	2022-07-27
KAP230686	Construction of multi-dimensional agricultural omics information system	Monoisolate	Whole Genome sequencing	2023-12-26
KAP230687	Domestic and international collaborative research to utilize agrobiological genome Big data	Monoisolate	Transcriptome or Gene Expression	2023-12-26
KAP220286	Broccoli genome sequencing	Monoisolate	Whole Genome sequencing	2022-05-02
KAP220432	Development of Evaluation System of Food Function baced on Gut Microbiome	Environment	Metagenome	2022-07-27
KAP220439	Development of microbial fungicide for agricultural crops using actinomycetes genomics-driven approaches	Multiisolate	Whole Genome sequencing	2022-07-27
KAP220311	Pathogenomics analysis of the airborne fungal pathogens in rice and red pepper	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-05-02
KAP220317	Development of microbiological agent for immune enhancement based on microbiome in dogs and cats	Multi-species	Whole Genome sequencing	2022-05-02
KAP220391	Development of microbial agents for the apple disease management and the Solanaceae crop growth based on genetic analysis	Multi-species	Whole Genome sequencing	2022-07-14
KAP220427	Identification of epigenetic factors associated with useful traits and development of epigenetic molecular marker system in the Brassicaceae family	Monoisolate	Whole Genome sequencing,Epigenomics	2022-07-27
KAP220438	Development of probiotic materials for ameliorating stress and type 2 diabetes using microbiome analysis	Environment	Whole Genome sequencing,Metagenome	2022-07-27
KAP220376	Metagenomics and Metabolomics for Agricultural Microbiome	Multi-species	Whole Genome sequencing,Metagenome	2022-07-11
KAP220372	Development of Evaluation System of Food Function baced on Gut Microbiome	Environment	Metagenome	2022-07-11
KAP220294	Completion of the Pinus densiflora reference genome	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-05-02
KAP220325	Development of Evaluation System of Food Function baced on Gut Microbiome	Environment	Metagenome	2022-05-03
KAP220308	Elucidation of pathogenesis mechanism of rice pathogenic Fusarum speceis and its application to the development of a disease control strategy	Monoisolate	Transcriptome or Gene Expression	2022-05-02
KAP220441	Functional microbial genome analysis of fermented foods and discovery of useful genes	Environment	Whole Genome sequencing,Metagenome	2022-07-27
KAP220407	Draft genome of the centipede, Scolopendra subspinipes	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-07-27
KAP220387	Deciphering rice microbiomes for the improvement of productivity and sustainability	Multiisolate	Whole Genome sequencing,Metagenome	2022-07-12
KAP220429	Isolation and genome analysis of beneficial yeast and acetic acid bacteria from natural fermented foods in Korea	Environment	Whole Genome sequencing,Metagenome	2022-07-27
KAP220331	Comparative analysis and its application using multi-dimensional agricultural omics information	Monoisolate	Whole Genome sequencing	2022-05-03
KAP220324	The genome sequencing of strawberry using octoploid inbred lines	Monoisolate	Whole Genome sequencing	2022-05-03
KAP220326	A study on the mechanism of suppressing odor through genome analysis of functional microorganisms and analysis of intestinal flora and metabolites of pigs	Multi-species	Whole Genome sequencing,Metagenome	2022-05-03
KAP220379	Reference genomes and comparative genomics analysis of yeast species useful for agriculture and food	Monoisolate	Whole Genome sequencing	2022-07-11
KAP220446	Elucidation of pathogenesis mechanism of rice pathogenic Fusarum speceis and its application to the development of a disease control strategy	Multi-species	Transcriptome or Gene Expression	2022-07-27
KAP220315	Identification of epigenetic factors associated with useful traits and development of epigenetic molecular marker system in the Brassicaceae family	Monoisolate	Whole Genome sequencing	2022-05-02
KAP220413	Genome sequencing of Perilla	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-07-27
KAP220403	Development and research of useful trait prediction system by developing metabolite markers	Monoisolate	Transcriptome or Gene Expression	2022-07-27
KAP220444	Microbial reference genome sequencing and comparative genomic analysis for agriculture and food	Multi-species	Whole Genome sequencing	2022-07-27
KAP220305	Development of new control measures against bovine Johne	Multiisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-05-02
KAP220411	Chrysanthemum genome sequencing	Monoisolate	Whole Genome sequencing	2022-07-27
KAP220295	Development of probiotic materials for ameliorating stress and type 2 diabetes using microbiome analysis	Multi-species	Whole Genome sequencing,Metagenome	2022-05-02
KAP220416	Korean pear genome sequencing	Monoisolate	Whole Genome sequencing	2022-07-27
KAP220418	Genome of the small brown planthopper, Laodelphax striatellus	Monoisolate	Whole Genome sequencing	2022-07-27
KAP220436	Reference genomes and comparative genomics analysis of yeast species useful for agriculture and food	Multi-species	Whole Genome sequencing,Transcriptome or Gene Expression	2022-07-27
KAP220389	Development of new control measures against bovine Johne	Multi-species	Metagenome,Transcriptome or Gene Expression	2022-07-14
KAP220448	Investigation of health functionalities of kimchi probiotics in vivo	Environment	Whole Genome sequencing,Metagenome	2022-07-27
KAP220421	De novo sequencing of Senna tora (L.) Roxb. genome	Monoisolate	Whole Genome sequencing	2022-07-27
KAP220293	Cabbage genome sequencing	Monoisolate	Whole Genome sequencing	2022-05-02
KAP220318	Kimchi probiotics development and health function kimchi industrialization	Monoisolate	Whole Genome sequencing	2022-05-02
KAP220306	Metagenomics and Metabolomics for Agricultural Microbiome	Multi-species	Metagenome	2022-05-02
KAP220420	Construction of integrated omic database in the agriculture, livestock and food	Monoisolate	Whole Genome sequencing	2022-07-27
KAP220405	Development of total analyzing software and system for microbial genomes and transcriptomes using NGS data	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-07-27
KAP220340	Development of Raman spectroscopy-based microbial desorption technology for high-speed separation of functional single cells and genome analysis	Monoisolate	Whole Genome sequencing,Metagenome	2022-05-03
KAP220443	Development of high value-added products using high-performance microbial resources derived from traditional yeast	Environment	Metagenome	2022-07-27
KAP220296	Metagenome information and system analysis of agricultural and fermented food environments"	Environment	Metagenome	2022-05-02
KAP220386	Microbiome-based intestinal environment improvement effect verification and correlation analysis with intestinal flora	Environment	Metagenome	2022-07-11
KAP220329	Development of high-density genetic map and bioinformatics analysis for Coix lacryma-jobi genome sequencing	Monoisolate	Transcriptome or Gene Expression	2022-05-03
KAP220312	Complete reference and comparative genomics analysis of useful filamentous fungi for agriculture and food industry	Monoisolate	Whole Genome sequencing	2022-05-02
KAP220341	Understanding of Symbiotic Rhizosphere Microbial Community and Development of Growth-Promoting Microbial Consortia for Agricultural Productivity Enhancement	Multi-species	Metagenome	2022-05-03
KAP220282	Genome analysis and construction of genetic map in watermelon and paprika	Monoisolate	Whole Genome sequencing	2022-05-02
KAP220288	Development of microbial agents for the apple disease management and the Solanaceae crop growth based on genetic analysis	Multi-species	Whole Genome sequencing	2022-05-02
KAP220313	Improvement of the Hibiscus syriacus reference genome and development of cold tolerance associated markers	Monoisolate	Whole Genome sequencing	2022-05-02
KAP220322	Production and assembly of Omija genome information	Monoisolate	Whole Genome sequencing	2022-05-03
KAP220419	Construction of reference genome maps of Livestock	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-07-27
KAP220450	Development of microbial agents for the apple disease management and the Solanaceae crop growth based on genetic analysis	Multi-species	Whole Genome sequencing	2022-07-27
KAP220292	Anaysis of genome structure and bioinformation in perilla	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-05-02
KAP220414	Draft genome sequence of perilla	Monoisolate	Whole Genome sequencing	2022-07-27
KAP220412	Study of population and evolutionary genomics in livestock	Monoisolate	Whole Genome sequencing	2022-07-27
KAP220415	Genome sequencing and assembly of onion	Monoisolate	Whole Genome sequencing	2022-07-27
KAP220417	Korean pear genetic material characterization	Monoisolate	Whole Genome sequencing	2022-07-27
KAP220281	Isolation and genome analysis of beneficial yeast and acetic acid bacteria from natural fermented foods in Korea	Multispecies, Environment	Whole Genome sequencing,Metagenome	2022-05-02
KAP220425	Fine Genetic Mapping and Contig Anchoring of Chrysanthemum boreale	Monoisolate	Whole Genome sequencing	2022-07-27
KAP220449	Culture Collection of Multifunctional Novel Bacteria with Biocontrol Effects using Microbial Culturomics	Environment	Whole Genome sequencing,Metagenome	2022-07-27
KAP220451	Pipeline discovery of useful genetic resources from large-capacity genetic information and development of useful enzymes	Environment	Metagenome	2022-07-27
KAP220287	Development of molecular markers using comparative genomics	Monoisolate	Whole Genome sequencing,Transcriptome or Gene Expression	2022-05-02

고객님께서 요청하신 내용을 처리중입니다.

잠시만 기다려주세요.

KoNA

Browse BioProject

Summary 내용시작

Submitter

Date

Project Design

Hierarchy

Publications

Relations 내용시작

Sample Group

Submitter’s other BioProjects