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2015년

2015 논문
No 논문
33

miRseqViewer: multi-panel visualization of sequence, structure and expression for analysis of microRNA sequencing data Insu Jang, Hyeshik Chang, Yukyung Jun, Seongjin Park, Jin Ok Yang, Byungwook Lee, Wankyu Kim, V. Narry Kim, Sanghyuk Lee Bioinformatics PMID:25322835

32

Whole genome sequencing of an ethnic Pathan (Pakhtun) from the north-west of Pakistan Muhammad Ilyas, Jong-Soo Kim, Jesse Cooper, Young-Ah Shin, Hak-Min Kim, Yun Cho, Seungwoo Hwang, Hyunho Kim, Jaewoo Moon, Oksung Chung, JeHoon Jun, Achal Rastogi, Sanghoon Song, Junsu Ko, Andrea Manica, Ziaur Rahman, Tayyab Husnain, Jong Bhak BMC Genomics PMID:25776671

31

The inhibitory effects of Cu2+ on Exopalaemon carinicauda arginine kinase via inhibition kinetics and molecular dynamics simulations Yue-Xiu Si, Jinhyuk Lee, Shang-Jun Yin, Xiao-Xu Gu, Yong-Doo Park, Guo-Ying Qian Appl Biochem Biotech ScienceDirect

30

The effect of Zn2+ on Exopalaemon carinicauda arginine kinase: Computational simulations including unfolding kinetics Yue-Xiu Si, Jinhyuk Lee, Shang-Jun Yin, Meng-Lin Zhang, Guo-Ying Qian, Yong-Doo Park Process Biochem ScienceDirect

29

The effect of Cu2+ on arginine kinase from Euphausia superba: A computational simulation integrating unfolding and aggregation studies Juan-Ge Cheng, Yue-Xiu Sia, Jinhyuk Lee, Feng Zhao, Jun-Mo Yang, Guo-Ying Qiana, Shang-Jun Yin, Yong-Doo Park Process Biochem ScienceDirect

28

Taxonomic redescription of Loxophyllum perihoplophorum and L. rostratum (Ciliophora: Pleurostomatida) from Korea Se-Joo Kim, Gi-Sik Min Animal Syst Evol Divers Link to publisher

27

Soybean [Glycine max (L.) Merrill]: importance as a crop and pedigree reconstruction of Korea varieties Chaeyoung Lee, Man-Soo Choi, Hyun-Tae Kim, Hong-Tai Yun, Byungwook Lee, Young-Soo Chung, Ryan W. Kim, Hong-Kyu Choi Plant Breed Biotech Link to publisher

26

Semi-empirical structure determination of Escherichia coli Hsp33 and identification of dynamic regulatory elements for the activation process Yoo-Sup Lee, Jinhyuk Lee, Kyoung-Seok Ryu, Yuno Lee, Tai-Geun Jung, Jeong-Hwa Jang, Dae-Won Sim, Eun-Hee Kim, Min-Duk Seo, Keun Woo Lee, Hyung-Sik Won J Mol Biol PMID:26453802

25

Protein tyrosine phosphatase 1B inhibitory activity of alkaloids from Rhizoma Coptidis and their molecular docking studies Jae Sue Choi, Md. Yousof Ali, Hyun Ah Jung, Sang Ho Oh, Ran Joo Choi, Eon Ji Kim J Ethnopharmacol PMID:26027757

24

Network comparison of inflammation in colorectal cancer and Alzheimer’s disease Sungjin Park, Seok Jong Yu, Yongseong Cho, Curt Balch, Jinhyuk Lee, Yon Hui Kim, Seungyoon Nam Biomed Res Int PMID:26273596

23

Mutations in DDX58, which encodes RIG-I, Cause atypical singleton-merten syndrome Mi-Ae Jang, Eun Kyoung Kim, Hesung Now, Nhung T.H. Nguyen, Woo-Jong Kim, Joo-Yeon Yoo, Jinhyuk Lee, Yun-Mi Jeong, Cheol-Hee Kim, Ok-Hwa Kim, Seongsoo Sohn, Seong-Hyeuk Nam, Yoojin Hong, Yong Seok Lee, Sung-A Chang, Shin Yi Jang, Jong-Won Kim, Myung-Shik Lee, So Young Lim, Ki-Sun Sung, Ki-Tae Park, Byoung Joon Kim, Joo-Heung Lee, Duk-Kyung Kim, Changwon Kee, Chang-Seok Ki Am J Hum Genet PMID:25620203

22

Molecular dynamics simulations integrating kinetics for Pb2+-induced arginine kinase inactivation and aggregation Yue-Xiu Si, Jinhyuk Lee, Yan Cai, Shang-Jun Yin, Jun-Mo Yang, Yong-Doo Park, Guo-Ying Qian Process Biochem ScienceDirect

21

Molecular dynamics simulation integrating study for Cr3+-binding to arginine kinase Yue-Xiu Si, Xiao-Xu Gu, Yan Cai, Shang-Jun Yin, Jun-Mo Yang, Yong-Doo Park, Jinhyuk Lee, Guo-Ying Qian Process Biochem ScienceDirect

20

Mercury accumulation in hydrothermal vent mollusks from the southern Tonga Arc, southwestern Pacific Ocean Seyong Lee, Se-Joo Kim, Se-Jong Ju, Sang-Joon Pak, Seung-Kyu Son, Kisook Yang, Seunghee Han Chemosphere PMID:25748345

19

Kinetics and molecular docking studies of cholinesterase inhibitors derived from water layer of Lycopodiella cernua (L.) Pic. Serm. (II) Tran Manh Hung, Joo Sang Lee, Nguyen Ngoc Chuong, Jeong Ah Kim, Sang Ho Oh, Mi Hee Woo, Jae Sue Choi, Byung Sun Min Chem Biol Interact PMID:26297990

18

Isolation of cholinesterase and β-secretase 1 inhibiting compounds from Lycopodiella cernua Van Thu Nguyen, Dao Cuong To, Manh Hung Tran, Sang Ho Oh, Jeong Ah Kim, Md Yousof Ali, Mi-Hee Woo, Jae Sue Choi, Byung Sun Min Bioorgan Med Chem PMID:26003344

17

Integrative structural annotation of de novo RNA-Seq provides an accurate reference gene set of the enormous genome of the onion (Allium cepa L.) Seungill Kim, Myung-Shin Kim, Yong-Min Kim, Seon-In Yeom, Kyeongchae Cheong, Ki-Tae Kim, Jongbum Jeon, Sunggil Kim, Do-Sun Kim, Seong-Han Sohn, Yong-Hwan Lee, Doil Choi DNA Res PMID:25362073

16

Integration of inhibition kinetics and molecular dynamics simulations to determine the effects of Zn2+ on acetaldehyde dehydrogenase 1 Yingying Xu, Jinhyuk Lee, Zhi-Rong Lü, Jing Jing Wang, Xi Xi Wang, Li Yan, Hai-Meng Zhou, Yong-Doo Park, Qian Zhang, Jun-Mo Yang Process Biochem ScienceDirect

15

Increased expression of interferon signaling genes in the bone marrow microenvironment of myelodysplastic syndromes Miyoung Kim, Seungwoo Hwang, Kiejung Park, Seon Young Kim, Young Kyung Lee, Dong Soon Lee PLoS One PMID:25803272

14

High performance cloud service for expressed sequence tag analysis Byungwook Lee, GunHwang Ko, IkSu Byeon, JongCheol Yoon, Dong-Hoon Choi J Kor Inst Next Gener Com eArticle

13

Global transcription network incorporating distal regulator binding reveals selective cooperation of cancer drivers and risk genes Kwoneel Kim, Woojin Yang, Kang Seon Lee, Hyoeun Bang, Kiwon Jang, Sang Cheol Kim, Jin Ok Yang, Seongjin Park, Kiejung Park, Jung Kyoon Choi Nucleic Acids Res PMID:26001967

12

Faster single-end alignment generation utilizing multi-thread for BWA Heeseung Jo, Gunhwan Koh Bio-Med Mater Eng PMID:26405948

11

Effects of L-malic acid on alpha-glucosidase: inhibition kinetics and computational molecular dynamics simulations Lin Gou, Yi Zhan, Jinhyuk Lee, Xuan Li, Zhi-Rong Lü, Hai-Meng Zhou, Hang Lu, Xi-Yao Wang, Yong-Doo Park, Jun-Mo Yang Appl Biochem Biotechnol PMID:25475890

10

Effect of hydroxysafflor yellow A on tyrosinase: Integration of inhibition kinetics with computational simulation Shang-Jun Yin, Kun-Yuan Liu, Jinhyuk Lee, Jun-Mo Yang, Guo-Ying Qian, Yue-Xiu Si, Yong-Doo Park Process Biochem ScienceDirect

9

Effect of Ba2+ on the activity and structure of α-glucosidase: Inhibition kinetics and molecular dynamics simulation Xuan Li, Zhi-Rong Lü, Wei Wang, Xiu Ping Han, Jun-Mo Yang, Yong-Doo Park, Hai-Meng Zhou, Qing Sheng, Jinhyuk Lee Process Biochem ScienceDirect

8

Complete genome sequence of Bacillus subtilis strain ATCC 6051a, a potential host for high-level secretion of industrial enzymes Haeyoung Jeong, Young Mi Sim, Seung-Hwan Park, Soo-Keun Choi Genome Announc PMID:25999562

7

Characterization of a small constitutive promoter from Arabidopsis translationally controlled tumor protein (AtTCTP) gene for plant transformation Yun-Jeong Han, Yong-Min Kim, Ok-Jin Hwang, Jeong-Il Kim Plant Cell Rep PMID:25410250

6

Activation of EZH2 and SUZ12 regulated by E2F1 predicts the disease progression and aggressive characteristics of bladder cancer Se-Ra Lee, Yun-Gil Roh, Seon-Kyu Kim, Ju-Seog Lee, So-Young Seol, Hyun-Hee Lee, Won-Tae Kim, Wun-Jae Kim, Jeonghoon Heo, Hee-Jae Cha, Tae-Hong Kang, Jin Woong Chung, In-Sun Chu, Sun-Hee Leem Clin Cancer Res PMID:26268246

5

A pathway-based approach for identifying biomarkers of tumor progression to trastuzumab-resistant breast cancer Seungyoon Nam, Hae Ryung Chang, Hae Rim Jung, Youme Gim, Nam Youl Kim, Regis Grailhe, Haeng Ran Seo, Hee Seo Park, Curt Balch, Jinhyuk Lee, Inhae Park, So Youn Jung, Kyung-Chae Jeong, Garth Powis, Han Liang, Eun Sook Lee, Jungsil Ro, Yon Hui Kim Cancer Lett PMID:25449779

4

A lactate-induced response to hypoxia Dong Chul Lee, Hyun Ahm Sohn, Zee-Yong Park, Sangho Oh, Yun Kyung Kang, Kyoung-min Lee, Minho Kang, Ye Jin Jang, Suk-Jin Yang, Young Ki Hong, Hanmi Noh, Jung-Ae Kim, Dong Joon Kim, Kwang-Hee Bae, Dong Min Kim, Sang J. Chung, Hyang Sook Yoo, Dae-Yeul Yu, Kyung Chan Park, Young Il Yeom Cell PMID:25892225

3

A database of gene expression profiles of Korean cancer genome Seon-Kyu Kim, In-Sun Chu Genomics Inform PMID:26523133

2

Development, validation and genetic analysis of a large soybean SNP genotyping array Yun-Gyeong Lee, Namhee Jeong, Ji Hong Kim, Kwanghee Lee, Kil Hyun Kim, Ali Pirani, Bo-Keun Ha, Sung-Taeg Kang, Beom-Seok Park, Jung-Kyung Moon, Namshin Kim, Soon-Chun Jeong Plant J PMID:25641104

1

PSIM: pattern-based read simulator for RNA-seq analysis Sang-min Lee, Haesung Tak, Kiejung Park, Hwan-Gue Cho, Do-Hoon Lee Multimed Tools Appl Link to publisher