INSERT INTO `ChimerSeq_dump` VALUES ('15802', 'TopHat-Fusion', 'NXF1_STX5', 'NXF1', 'chr11', '62563931', '-', 'STX5', 'chr11', '62575099', '-', 'Exonic', 'hg19', 'UCS', 'TCGA-NA-A4R1-01A', '', '130', '', 'In-Frame', 'Intra-chr', '11q12.3', '11q12.3', '', '', '', '', '', '', ''), ('15803', 'TopHat-Fusion', 'CD44_CAPRIN1', 'CD44', 'chr11', '35160916', '+', 'CAPRIN1', 'chr11', '34110941', '+', 'Exonic', 'hg19', 'UCS', 'TCGA-NG-A4VU-01A', '', '290', '', 'In-Frame', 'Intra-chr', '11p13', '11p13', '', '', '', '', '', '', ''), ('15804', 'TopHat-Fusion', 'SUMO2_MAPK8IP2', 'SUMO2', 'chr17', '73178283', '-', 'MAPK8IP2', 'chr22', '51042479', '-', 'Exonic', 'hg19', 'UCS', 'TCGA-NA-A4R1-01A', '', '162', '', 'In-Frame', 'Inter-chr', '17q25.1', '22q13.33', '', '', '', '', '', '', ''), ('15805', 'TopHat-Fusion', 'KANSL1_SPOP', 'KANSL1', 'chr17', '44301036', '-', 'SPOP', 'chr17', '47700237', '-', 'Exonic', 'hg19', 'UCS', 'TCGA-N8-A56S-01A', '', '120', '', '5\'UTR-5\'UTR', 'Intra-chr', '17q21.31', '17q21.33', '', '', '', '', 'Transcription_Factor', '', ''), ('15806', 'TopHat-Fusion', 'LSM12_ITGA2B', 'LSM12', 'chr17', '42141168', '-', 'ITGA2B', 'chr17', '42449790', '-', 'Exonic', 'hg19', 'UCS', 'TCGA-N8-A56S-01A', '', '227', '', 'In-Frame', 'Intra-chr', '17q21.31', '17q21.31', '', '', '', '', '', '', ''), ('15807', 'TopHat-Fusion', 'BPTF_RGS9', 'BPTF', 'chr17', '65850877', '+', 'RGS9', 'chr17', '63164317', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A22D-01A', '', '267', '', 'In-Frame', 'Intra-chr', '17q24.2', '17q24.1', '', '', '', '', '', '', ''), ('15808', 'TopHat-Fusion', 'BPTF_RGS9', 'BPTF', 'chr17', '65850877', '+', 'RGS9', 'chr17', '63173849', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A22D-01A', '', '259', '', 'Out-of-Frame', 'Intra-chr', '17q24.2', '17q24.1', '', '', '', '', '', '', ''), ('15809', 'TopHat-Fusion', 'SLC35B1_IGFBP4', 'SLC35B1', 'chr17', '47784326', '-', 'IGFBP4', 'chr17', '38609236', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A04W-01A', '', '105', '', 'In-Frame', 'Intra-chr', '17q21.33', '17q21.2', '', '', '', '', '', '', ''), ('15810', 'TopHat-Fusion', 'NDE1_SMG1', 'NDE1', 'chr16', '15797979', '+', 'SMG1', 'chr16', '18844261', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A04Q-01A', '', '124', '', 'In-Frame', 'Intra-chr', '16p13.11', '16p12.3', 'Kinase', '', '', '', '', '', ''), ('15811', 'TopHat-Fusion', 'PTPRK_AIG1', 'PTPRK', 'chr6', '128505576', '-', 'AIG1', 'chr6', '143609344', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A04W-01A', '', '155', '', 'Out-of-Frame', 'Intra-chr', '6q22.33', '6q24.2', '', '', '', '', '', '', ''), ('15812', 'TopHat-Fusion', 'PTPRK_STXBP6', 'PTPRK', 'chr6', '128505576', '-', 'STXBP6', 'chr14', '25326362', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A04W-01A', '', '193', '', 'In-Frame', 'Inter-chr', '6q22.33', '14q12', '', '', '', '', '', '', ''), ('15813', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48264375', '-', 'COL1A2', 'chr7', '94050329', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A04A-01A', '', '119', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('15814', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48272592', '-', 'COL1A2', 'chr7', '94054428', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A04A-01A', '', '117', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('15815', 'TopHat-Fusion', 'EFCAB13_TSHZ2', 'EFCAB13', 'chr17', '45445786', '+', 'TSHZ2', 'chr20', '52103682', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A22D-01A', '', '392', '', 'Out-of-Frame', 'Inter-chr', '17q21.32', '20q13.2', '', '', '', '', '', '', ''), ('15816', 'TopHat-Fusion', 'RMDN1_PDXDC1', 'RMDN1', 'chr8', '87495060', '+', 'PDXDC1', 'chr16', '15138230', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0RQ-01A', '', '108', '', 'Out-of-Frame', 'Inter-chr', '8q21.3', '16p13.11', '', '', '', '', '', '', ''), ('15817', 'TopHat-Fusion', 'PILRA_PILRB', 'PILRA', 'chr7', '99972055', '+', 'PILRB', 'chr7', '99964715', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15D-01A', '', '371', '', 'In-Frame', 'Intra-chr', '7q22.1', '7q22.1', '', '', '', '', '', '', ''), ('15818', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A04Q-01A', '', '146', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('15819', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A1G0-01A', '', '175', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('15820', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0RQ-01A', '', '128', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('15821', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0HF-01A', '', '404', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('15822', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1N6-11A', '', '396', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('15823', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A1EN-11A', '', '106', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('15824', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A04T-01A', '', '131', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('15825', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15K-06A', '', '223', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('15826', 'TopHat-Fusion', 'SYNE2_KIAA0391', 'SYNE2', 'chr14', '64453334', '+', 'KIAA0391', 'chr14', '35735932', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A079-01A', '', '370', '', 'In-Frame', 'Intra-chr', '14q23.2', '14q13.2', '', '', '', '', '', '', ''), ('15827', 'TopHat-Fusion', 'MACROD1_PITPNM1', 'MACROD1', 'chr11', '63918710', '-', 'PITPNM1', 'chr11', '67267891', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A4ZE-01A', '', '208', '', 'In-Frame', 'Intra-chr', '11q13.1', '11q13.2', '', '', '', '', '', '', ''), ('15828', 'TopHat-Fusion', 'MACROD1_PITPNM1', 'MACROD1', 'chr11', '63918710', '-', 'PITPNM1', 'chr11', '67269556', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A4ZE-01A', '', '208', '', 'In-Frame', 'Intra-chr', '11q13.1', '11q13.2', '', '', '', '', '', '', ''), ('15829', 'TopHat-Fusion', 'ZCCHC8_RSRC2', 'ZCCHC8', 'chr12', '122983373', '-', 'RSRC2', 'chr12', '122990252', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1P1-01A', '', '224', '', 'Out-of-Frame', 'Intra-chr', '12q24.31', '12q24.31', '', '', '', '', '', '', ''), ('15830', 'TopHat-Fusion', 'PCAT18_KCTD1', 'PCAT18', 'chr18', '24283355', '-', 'KCTD1', 'chr18', '24081213', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A08C-01A', '', '114', '', 'Out-of-Frame', 'Intra-chr', '18q11.2', '18q11.2', '', '', '', '', '', '', ''), ('15831', 'TopHat-Fusion', 'ERBB2_THRA', 'ERBB2', 'chr17', '37880176', '+', 'THRA', 'chr17', '38233860', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-GM-A2DA-01A', '', '235', '', 'Out-of-Frame', 'Intra-chr', '17q12', '17q21.1', 'Kinase', '', '', 'Receptor', 'Transcription_Factor', '', ''), ('15832', 'TopHat-Fusion', 'CTSB_DOCK5', 'CTSB', 'chr8', '11705575', '-', 'DOCK5', 'chr8', '25108759', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15K-06A', '', '611', '', 'In-Frame', 'Intra-chr', '8p23.1', '8p21.2', '', '', '', '', '', '', ''), ('15833', 'TopHat-Fusion', 'CTSB_DOCK5', 'CTSB', 'chr8', '11705575', '-', 'DOCK5', 'chr8', '25108903', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15K-06A', '', '611', '', 'In-Frame', 'Intra-chr', '8p23.1', '8p21.2', '', '', '', '', '', '', ''), ('15834', 'TopHat-Fusion', 'LRP5_MOGAT2', 'LRP5', 'chr11', '68193654', '+', 'MOGAT2', 'chr11', '75431036', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A1-A0SQ-01A', '', '117', '', 'In-Frame', 'Intra-chr', '11q13.2', '11q13.5', '', '', '', '', '', '', ''), ('15835', 'TopHat-Fusion', 'WWP1_CNBD1', 'WWP1', 'chr8', '87393857', '+', 'CNBD1', 'chr8', '88249600', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A079-01A', '', '178', '', 'Out-of-Frame', 'Intra-chr', '8q21.3', '8q21.3', '', '', '', '', '', '', ''), ('15836', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A3RF-01A', '', '104', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('15837', 'TopHat-Fusion', 'CDH11_PRC1', 'CDH11', 'chr16', '65005481', '-', 'PRC1', 'chr15', '91512852', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A4S1-01A', '', '259', '', 'Out-of-Frame', 'Inter-chr', '16q21', '15q26.1', '', '', '', '', '', '', ''), ('15838', 'TopHat-Fusion', 'MYH9_FOXRED2', 'MYH9', 'chr22', '36737414', '-', 'FOXRED2', 'chr22', '36889849', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A09Q-01A', '', '179', '', 'In-Frame', 'Intra-chr', '22q12.3', '22q12.3', '', '', '', '', '', '', ''), ('15839', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A25A-01A', '', '102', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('15840', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A138-01A', '', '3175', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('15841', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677324', '+', 'IGLL5', 'chr22', '23235963', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A1ET-11B', '', '150', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('15842', 'TopHat-Fusion', 'TMEM117_SCAF11', 'TMEM117', 'chr12', '44260207', '+', 'SCAF11', 'chr12', '46339031', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12W-01A', '', '117', '', 'Out-of-Frame', 'Intra-chr', '12q12', '12q12', '', '', '', '', '', '', ''), ('15843', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48273303', '-', 'COL1A2', 'chr7', '94043531', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A4S1-01A', '', '137', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('15844', 'TopHat-Fusion', 'NDUFS4_IL6ST', 'NDUFS4', 'chr5', '52973642', '+', 'IL6ST', 'chr5', '55243320', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A09Q-01A', '', '109', '', 'Out-of-Frame', 'Intra-chr', '5q11.2', '5q11.2', '', '', '', '', '', '', ''), ('15845', 'TopHat-Fusion', 'NDUFS4_IL6ST', 'NDUFS4', 'chr5', '52974362', '+', 'IL6ST', 'chr5', '55243320', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A09Q-01A', '', '109', '', 'Out-of-Frame', 'Intra-chr', '5q11.2', '5q11.2', '', '', '', '', '', '', ''), ('15846', 'TopHat-Fusion', 'SEPT9_MRPL38', '9.Sep', 'chr17', '75303281', '+', 'MRPL38', 'chr17', '73895654', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12V-01A', '', '112', '', 'Out-of-Frame', 'Intra-chr', '17q25.3', '17q25.1', '', '', '', '', '', '', ''), ('15847', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94047863', '+', 'COL1A1', 'chr17', '48265961', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A4S1-01A', '', '210', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('15848', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94049755', '+', 'COL1A1', 'chr17', '48265961', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A4S1-01A', '', '220', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('15849', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94056973', '+', 'COL1A1', 'chr17', '48264482', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A4S1-01A', '', '200', '', 'Out-of-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('15850', 'TopHat-Fusion', 'C10orf11_RAB3IP', 'C10orf11', 'chr10', '77760986', '+', 'RAB3IP', 'chr12', '70195500', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A10C-01A', '', '171', '', 'Out-of-Frame', 'Inter-chr', '10q22.3', '12q15', '', '', '', '', '', '', ''), ('15851', 'TopHat-Fusion', 'MITF_PTDSS1', 'MITF', 'chr3', '69900940', '+', 'PTDSS1', 'chr8', '97274446', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1PC-01B', '', '580', '', 'Out-of-Frame', 'Inter-chr', '3p13', '8q22.1', '', '', '', '', '', '', ''), ('15852', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A6VO-01A', '', '122', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('15853', 'TopHat-Fusion', 'ZNF423_ZNF652', 'ZNF423', 'chr16', '49732353', '-', 'ZNF652', 'chr17', '47388673', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A08J-01A', '', '127', '', 'Out-of-Frame', 'Inter-chr', '16q12.1', '17q21.32', '', '', '', '', '', '', ''), ('15854', 'TopHat-Fusion', 'PSMD11_CEP112', 'PSMD11', 'chr17', '30774063', '+', 'CEP112', 'chr17', '64179424', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A08J-01A', '', '118', '', 'CDS-5\'UTR', 'Intra-chr', '17q11.2', '17q24.1', '', '', '', '', '', '', ''), ('15855', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48273303', '-', 'COL1A2', 'chr7', '94043531', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A201-01A', '', '119', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('15856', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48273303', '-', 'COL1A2', 'chr7', '94043531', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1JJ-01A', '', '113', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('15857', 'TopHat-Fusion', 'ASIC2_CEP112', 'ASIC2', 'chr17', '31749746', '-', 'CEP112', 'chr17', '64125863', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A08J-01A', '', '112', '', 'Out-of-Frame', 'Intra-chr', '17q11.2', '17q24.1', '', '', '', '', '', '', ''), ('15858', 'TopHat-Fusion', 'PCF11_KDM2A', 'PCF11', 'chr11', '82868672', '+', 'KDM2A', 'chr11', '66974980', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A201-01A', '', '112', '', 'Out-of-Frame', 'Intra-chr', '11q14.1', '11q13.2', '', '', '', '', '', '', ''), ('15859', 'TopHat-Fusion', 'PPIF_REEP3', 'PPIF', 'chr10', '81107498', '+', 'REEP3', 'chr10', '65354537', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A0AJ-01A', '', '295', '', 'In-Frame', 'Intra-chr', '10q22.3', '10q21.3', '', '', '', '', '', '', ''), ('15860', 'TopHat-Fusion', 'LACE1_ZUFSP', 'LACE1', 'chr6', '108645251', '+', 'ZUFSP', 'chr6', '116957041', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A0AJ-01A', '', '152', '', 'In-Frame', 'Intra-chr', '6q21', '6q22.1', '', '', '', '', '', '', ''), ('15861', 'TopHat-Fusion', 'GYS1_EML2', 'GYS1', 'chr19', '49485511', '-', 'EML2', 'chr19', '46116928', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A1F6-01A', '', '382', '', 'Out-of-Frame', 'Intra-chr', '19q13.33', '19q13.32', '', '', '', '', '', '', ''), ('15862', 'TopHat-Fusion', 'PIP4K2B_MED24', 'PIP4K2B', 'chr17', '36933939', '-', 'MED24', 'chr17', '38188342', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A4SF-01A', '', '213', '', 'In-Frame', 'Intra-chr', '17q12', '17q21.1', 'Kinase', '', '', '', 'Transcription_Factor', '', ''), ('15863', 'TopHat-Fusion', 'DHRS4L2_DHRS2', 'DHRS4L2', 'chr14', '24464341', '+', 'DHRS2', 'chr14', '24112360', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A4SF-01A', '', '266', '', 'In-Frame', 'Intra-chr', '14q11.2', '14q11.2', '', '', '', '', '', '', ''), ('15864', 'TopHat-Fusion', 'BPTF_PITPNC1', 'BPTF', 'chr17', '65936771', '+', 'PITPNC1', 'chr17', '65665623', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A1F6-01A', '', '163', '', 'In-Frame', 'Intra-chr', '17q24.2', '17q24.2', '', '', '', '', 'Transcription_Factor', '', ''), ('15865', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677323', '+', 'IGLL5', 'chr22', '23235962', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0YL-01A', '', '112', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('15866', 'TopHat-Fusion', 'TRPS1_RAD21', 'TRPS1', 'chr8', '116599227', '-', 'RAD21', 'chr8', '117869711', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1RB-01A', '', '110', '', 'Out-of-Frame', 'Intra-chr', '8q23.3', '8q24.11', '', '', '', '', 'Transcription_Factor', '', ''), ('15867', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94047863', '+', 'COL1A1', 'chr17', '48265961', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A6R9-01A', '', '112', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('15868', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94049753', '+', 'COL1A1', 'chr17', '48265963', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A6R9-01A', '', '118', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('15869', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94053754', '+', 'COL1A1', 'chr17', '48272460', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A6R9-01A', '', '104', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('15870', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A3DX-01A', '', '315', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('15871', 'TopHat-Fusion', 'CASC21_CASC8', 'CASC21', 'chr8', '128302304', '+', 'CASC8', 'chr8', '128433073', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I2-01A', '', '421', '', 'Out-of-Frame', 'Intra-chr', '8q24.21', '8q24.21', '', '', '', '', '', '', ''), ('15872', 'TopHat-Fusion', 'CASC21_CASC8', 'CASC21', 'chr8', '128302304', '+', 'CASC8', 'chr8', '128433073', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A5IZ-01A', '', '458', '', 'Out-of-Frame', 'Intra-chr', '8q24.21', '8q24.21', '', '', '', '', '', '', ''), ('15873', 'TopHat-Fusion', 'ESR1_ASPH', 'ESR1', 'chr6', '152201905', '+', 'ASPH', 'chr8', '62416067', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A3KD-01A', '', '614', '', 'Out-of-Frame', 'Inter-chr', '6q25.1', '8q12.3', '', '', '', '', '', '', ''), ('15874', 'TopHat-Fusion', 'PCDHA4_PCDHA10', 'PCDHA4', 'chr5', '140203711', '+', 'PCDHA10', 'chr5', '140358533', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A3KD-01A', '', '118', '', 'Out-of-Frame', 'Intra-chr', '5q31.3', '5q31.3', '', '', '', '', '', '', ''), ('15875', 'TopHat-Fusion', 'PCDHA4_PCDHA10', 'PCDHA4', 'chr5', '140210069', '+', 'PCDHA10', 'chr5', '140358533', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A3KD-01A', '', '118', '', 'In-Frame', 'Intra-chr', '5q31.3', '5q31.3', '', '', '', '', '', '', ''), ('15876', 'TopHat-Fusion', 'STON2_LOC100506700', 'STON2', 'chr14', '81790360', '-', 'LOC100506700', 'chr14', '81908785', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1LL-01A', '', '656', '', 'Out-of-Frame', 'Intra-chr', '14q31.1', '14q31.1', '', '', '', '', '', '', ''), ('15877', 'TopHat-Fusion', 'NEMF_SLC35F4', 'NEMF', 'chr14', '50302450', '-', 'SLC35F4', 'chr14', '58091141', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A10A-01A', '', '129', '', 'Out-of-Frame', 'Intra-chr', '14q21.3', '14q22.3', '', '', '', '', '', '', ''), ('15878', 'TopHat-Fusion', 'ATP8A2_IRS2', 'ATP8A2', 'chr13', '26297827', '+', 'IRS2', 'chr13', '110434978', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A1FL-01A', '', '462', '', 'Out-of-Frame', 'Intra-chr', '13q12.13', '13q34', '', '', '', '', '', '', ''), ('15879', 'TopHat-Fusion', 'SS18L1_CDH4', 'SS18L1', 'chr20', '60718944', '+', 'CDH4', 'chr20', '60469965', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1LL-01A', '', '147', '', 'In-Frame', 'Intra-chr', '20q13.33', '20q13.33', '', '', '', '', '', '', ''), ('15880', 'TopHat-Fusion', 'MCM6_DARS', 'MCM6', 'chr2', '136622582', '-', 'DARS', 'chr2', '136664976', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A0AM-01A', '', '113', '', 'In-Frame', 'Intra-chr', '2q21.3', '2q21.3', '', '', '', '', '', '', ''), ('15881', 'TopHat-Fusion', 'WNK1_PIP4K2C', 'WNK1', 'chr12', '966414', '+', 'PIP4K2C', 'chr12', '57995308', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A0AM-01A', '', '102', '', 'Out-of-Frame', 'Intra-chr', '12p13.33', '12q13.3', 'Kinase', '', '', '', '', '', ''), ('15882', 'TopHat-Fusion', 'IL12RB2_DAB1', 'IL12RB2', 'chr1', '67845805', '+', 'DAB1', 'chr1', '57611101', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A0AM-01A', '', '172', '', 'In-Frame', 'Intra-chr', '1p31.3', '1p32.2', '', '', '', '', '', '', ''), ('15883', 'TopHat-Fusion', 'TRIO_MARCH11', 'TRIO', 'chr5', '14488368', '+', '11.Mar', 'chr5', '16091189', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A0AM-01A', '', '199', '', 'In-Frame', 'Intra-chr', '5p15.2', '5p15.1', '', '', '', '', '', '', ''), ('15884', 'TopHat-Fusion', 'MSRB2_HPS4', 'MSRB2', 'chr10', '23385776', '+', 'HPS4', 'chr22', '26849239', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B7-01A', '', '143', '', 'Out-of-Frame', 'Inter-chr', '10p12.2', '22q12.1', '', '', '', '', '', '', ''), ('15885', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677320', '+', 'IGLL5', 'chr22', '23235959', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-S3-A6ZG-01A', '', '327', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('15886', 'TopHat-Fusion', 'CASC21_CASC8', 'CASC21', 'chr8', '128302304', '+', 'CASC8', 'chr8', '128433073', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5RW-01A', '', '411', '', 'Out-of-Frame', 'Intra-chr', '8q24.21', '8q24.21', '', '', '', '', '', '', ''), ('15887', 'TopHat-Fusion', 'ECI1_NKAIN4', 'ECI1', 'chr16', '2293046', '-', 'NKAIN4', 'chr20', '61882098', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0H9-01A', '', '215', '', 'Out-of-Frame', 'Inter-chr', '16p13.3', '20q13.33', '', '', '', '', '', '', ''), ('15888', 'TopHat-Fusion', 'STAU1_TSHZ2', 'STAU1', 'chr20', '47733283', '-', 'TSHZ2', 'chr20', '51611354', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0H9-01A', '', '177', '', 'Out-of-Frame', 'Intra-chr', '20q13.13', '20q13.2', '', '', '', '', '', '', ''), ('15889', 'TopHat-Fusion', 'STAU1_TSHZ2', 'STAU1', 'chr20', '47733662', '-', 'TSHZ2', 'chr20', '51609110', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0H9-01A', '', '177', '', 'Out-of-Frame', 'Intra-chr', '20q13.13', '20q13.2', '', '', '', '', '', '', ''), ('15890', 'TopHat-Fusion', 'STAU1_TSHZ2', 'STAU1', 'chr20', '47733662', '-', 'TSHZ2', 'chr20', '51610559', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0H9-01A', '', '177', '', 'Out-of-Frame', 'Intra-chr', '20q13.13', '20q13.2', '', '', '', '', '', '', ''), ('15891', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0EU-01A', '', '245', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('15892', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-LL-A73Y-01A', '', '479', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('15893', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48271738', '-', 'COL1A2', 'chr7', '94054919', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0EU-01A', '', '137', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('15894', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A07F-01A', '', '101', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('15895', 'TopHat-Fusion', 'ARL15_NSD1', 'ARL15', 'chr5', '53372650', '-', 'NSD1', 'chr5', '176639195', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XT-01A', '', '105', '', 'Out-of-Frame', 'Intra-chr', '5q11.2', '5q35.3', '', '', '', '', '', '', ''), ('15896', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48265892', '-', 'COL1A2', 'chr7', '94038658', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A208-01A', '', '116', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('15897', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48265892', '-', 'COL1A2', 'chr7', '94038658', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XO-01A', '', '174', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('15898', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48265892', '-', 'COL1A2', 'chr7', '94038658', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XT-01A', '', '110', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('15899', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48270000', '-', 'COL1A2', 'chr7', '94052286', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XO-01A', '', '363', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('15900', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48273303', '-', 'COL1A2', 'chr7', '94043531', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A208-01A', '', '182', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('15901', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48273303', '-', 'COL1A2', 'chr7', '94043531', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XO-01A', '', '268', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('15902', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48273303', '-', 'COL1A2', 'chr7', '94043531', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XT-01A', '', '170', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('15903', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189864108', '+', 'COL1A1', 'chr17', '48266635', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XO-01A', '', '140', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('15904', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189868187', '+', 'COL1A1', 'chr17', '48272674', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A208-01A', '', '223', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('15905', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189868187', '+', 'COL1A1', 'chr17', '48272674', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XO-01A', '', '138', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('15906', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189868187', '+', 'COL1A1', 'chr17', '48272674', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XT-01A', '', '106', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('15907', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189871706', '+', 'COL1A1', 'chr17', '48264482', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XO-01A', '', '109', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('15908', 'TopHat-Fusion', 'CISD2_THBS1', 'CISD2', 'chr4', '103790343', '+', 'THBS1', 'chr15', '39886433', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0EM-01A', '', '209', '', 'In-Frame', 'Inter-chr', '4q24', '15q14', '', '', '', '', '', '', ''), ('15909', 'TopHat-Fusion', 'CISD2_THBS1', 'CISD2', 'chr4', '103791023', '+', 'THBS1', 'chr15', '39886832', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0EM-01A', '', '209', '', 'Out-of-Frame', 'Inter-chr', '4q24', '15q14', '', '', '', '', '', '', ''), ('15910', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94035614', '+', 'COL1A1', 'chr17', '48272460', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XO-01A', '', '124', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('15911', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94053754', '+', 'COL1A1', 'chr17', '48272460', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XT-01A', '', '190', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('15912', 'TopHat-Fusion', 'COL1A1_COL3A1', 'COL1A1', 'chr17', '48269148', '-', 'COL3A1', 'chr2', '189863408', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XT-01A', '', '141', '', 'In-Frame', 'Inter-chr', '17q21.33', '2q32.2', '', '', '', '', '', '', ''), ('15913', 'TopHat-Fusion', 'MED13L_PRIM1', 'MED13L', 'chr12', '116675272', '-', 'PRIM1', 'chr12', '57133146', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AV-01A', '', '720', '', 'In-Frame', 'Intra-chr', '12q24.21', '12q13.3', '', '', '', '', '', '', ''), ('15914', 'TopHat-Fusion', 'CTTN_ANO1', 'CTTN', 'chr11', '70256065', '+', 'ANO1', 'chr11', '69933857', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A07O-01A', '', '175', '', 'In-Frame', 'Intra-chr', '11q13.3', '11q13.3', '', '', '', '', '', '', ''), ('15915', 'TopHat-Fusion', 'TNKS2_ADD3-AS1', 'TNKS2', 'chr10', '93614882', '+', 'ADD3-AS1', 'chr10', '111713648', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A1EY-01A', '', '315', '', 'CDS-5\'UTR', 'Intra-chr', '10q23.32', '10q25.1', '', '', '', '', '', '', ''), ('15916', 'TopHat-Fusion', 'TNKS2_ADD3-AS1', 'TNKS2', 'chr10', '93614882', '+', 'ADD3-AS1', 'chr10', '111713697', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A1EY-01A', '', '315', '', 'CDS-5\'UTR', 'Intra-chr', '10q23.32', '10q25.1', '', '', '', '', '', '', ''), ('15917', 'TopHat-Fusion', 'TNKS2_ADD3-AS1', 'TNKS2', 'chr10', '93614882', '+', 'ADD3-AS1', 'chr10', '111714400', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A1EY-01A', '', '315', '', 'CDS-5\'UTR', 'Intra-chr', '10q23.32', '10q25.1', '', '', '', '', '', '', ''), ('15918', 'TopHat-Fusion', 'ASAP2_ADAM17', 'ASAP2', 'chr2', '9430293', '+', 'ADAM17', 'chr2', '9661331', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A07O-01A', '', '109', '', 'Out-of-Frame', 'Intra-chr', '2p25.1', '2p25.1', '', '', '', '', '', '', ''), ('15919', 'TopHat-Fusion', 'MYO9A_TMEM59', 'MYO9A', 'chr15', '72208710', '-', 'TMEM59', 'chr1', '54509197', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A07O-01A', '', '117', '', 'In-Frame', 'Inter-chr', '15q23', '1p32.3', '', '', '', '', '', '', ''), ('15920', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A159-01A', '', '694', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('15921', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-GI-A2C9-01A', '', '102', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('15922', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5RV-01A', '', '102', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('15923', 'TopHat-Fusion', 'PBX1_RGS7', 'PBX1', 'chr1', '164761974', '+', 'RGS7', 'chr1', '241322919', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A07O-01A', '', '113', '', 'Out-of-Frame', 'Intra-chr', '1q23.3', '1q43', '', '', '', '', '', '', ''), ('15924', 'TopHat-Fusion', 'PBX1_RGS7', 'PBX1', 'chr1', '164761974', '+', 'RGS7', 'chr1', '241323682', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A07O-01A', '', '113', '', 'Out-of-Frame', 'Intra-chr', '1q23.3', '1q43', '', '', '', '', '', '', ''), ('15925', 'TopHat-Fusion', 'SCUBE2_ZNF143', 'SCUBE2', 'chr11', '9080849', '-', 'ZNF143', 'chr11', '9537882', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A426-01A', '', '189', '', 'Out-of-Frame', 'Intra-chr', '11p15.4', '11p15.4', '', '', '', '', '', '', ''), ('15926', 'TopHat-Fusion', 'SCUBE2_ZNF143', 'SCUBE2', 'chr11', '9080849', '-', 'ZNF143', 'chr11', '9537885', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A426-01A', '', '189', '', 'Out-of-Frame', 'Intra-chr', '11p15.4', '11p15.4', '', '', '', '', '', '', ''), ('15927', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48273303', '-', 'COL1A2', 'chr7', '94043531', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A1EY-01A', '', '101', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('15928', 'TopHat-Fusion', 'CASC21_CASC8', 'CASC21', 'chr8', '128302304', '+', 'CASC8', 'chr8', '128433073', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-GI-A2C9-01A', '', '105', '', 'Out-of-Frame', 'Intra-chr', '8q24.21', '8q24.21', '', '', '', '', '', '', ''), ('15929', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-GI-A2C9-01A', '', '414', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('15930', 'TopHat-Fusion', 'HCG17_HLA-C', 'HCG17', 'chr6', '30228110', '-', 'HLA-C', 'chr6', '31239375', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1ND-11A', '', '234', '', 'Out-of-Frame', 'Intra-chr', '6p22.1', '6p21.33', '', '', '', '', '', '', ''), ('15931', 'TopHat-Fusion', 'DLG2_UNC45B', 'DLG2', 'chr11', '85195025', '-', 'UNC45B', 'chr17', '33478331', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A13G-01B', '', '100', '', 'Out-of-Frame', 'Inter-chr', '11q14.1', '17q12', '', '', '', '', '', '', ''), ('15932', 'TopHat-Fusion', 'PILRA_PILRB', 'PILRA', 'chr7', '99972055', '+', 'PILRB', 'chr7', '99964715', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A159-01A', '', '242', '', 'In-Frame', 'Intra-chr', '7q22.1', '7q22.1', '', '', '', '', '', '', ''), ('15933', 'TopHat-Fusion', 'ZNF670_PRIM1', 'ZNF670', 'chr1', '247206462', '+', 'PRIM1', 'chr12', '57140739', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A07O-01A', '', '100', '', 'Out-of-Frame', 'Inter-chr', '1q44', '12q13.3', '', '', '', '', '', '', ''), ('15934', 'TopHat-Fusion', 'PTEN_RPL11', 'PTEN', 'chr10', '89705654', '+', 'RPL11', 'chr1', '24021153', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A07O-01A', '', '177', '', 'In-Frame', 'Inter-chr', '10q23.31', '1p36.11', '', '', '', '', '', '', ''), ('15935', 'TopHat-Fusion', 'AP2A1_AP2A2', 'AP2A1', 'chr19', '50298989', '+', 'AP2A2', 'chr11', '985426', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5RV-01A', '', '125', '', 'Out-of-Frame', 'Inter-chr', '19q13.33', '11p15.5', '', '', '', '', '', '', ''), ('15936', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-3C-AALI-01A', '', '420', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('15937', 'TopHat-Fusion', 'LINC00589_CHST8', 'LINC00589', 'chr8', '29590522', '-', 'CHST8', 'chr19', '34113201', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-S3-AA12-01A', '', '439', '', '3\'UTR-5\'UTR', 'Inter-chr', '8p12', '19q13.11', '', '', '', '', '', '', ''), ('15938', 'TopHat-Fusion', 'LINC00589_CHST8', 'LINC00589', 'chr8', '29590699', '-', 'CHST8', 'chr19', '34113201', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-S3-AA12-01A', '', '439', '', '3\'UTR-5\'UTR', 'Inter-chr', '8p12', '19q13.11', '', '', '', '', '', '', ''), ('15939', 'TopHat-Fusion', 'TBL1XR1_LINC00578', 'TBL1XR1', 'chr3', '176816253', '-', 'LINC00578', 'chr3', '177454946', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12P-01A', '', '208', '', '5\'UTR-5\'UTR', 'Intra-chr', '3q26.32', '3q26.32', '', '', '', '', '', '', ''), ('15940', 'TopHat-Fusion', 'CABLES1_FTO', 'CABLES1', 'chr18', '20716570', '+', 'FTO', 'chr16', '54145673', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-S3-AA12-01A', '', '207', '', 'In-Frame', 'Inter-chr', '18q11.2', '16q12.2', '', '', '', '', '', '', ''), ('15941', 'TopHat-Fusion', 'SCMH1_PPT1', 'SCMH1', 'chr1', '41536266', '-', 'PPT1', 'chr1', '40539854', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1R7-01A', '', '114', '', 'Out-of-Frame', 'Intra-chr', '1p34.2', '1p34.2', '', '', '', '', '', '', ''), ('15942', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A0TP-01A', '', '128', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('15943', 'TopHat-Fusion', 'DDX5_RSAD1', 'DDX5', 'chr17', '62496112', '-', 'RSAD1', 'chr17', '48556583', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-3C-AALI-01A', '', '219', '', 'Out-of-Frame', 'Intra-chr', '17q23.3', '17q21.33', '', '', '', '', '', '', ''), ('15944', 'TopHat-Fusion', 'RAD23A_CALR', 'RAD23A', 'chr19', '13063666', '+', 'CALR', 'chr19', '13054350', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A1-A0SO-01A', '', '234', '', 'In-Frame', 'Intra-chr', '19p13.2', '19p13.2', '', '', '', '', '', '', ''), ('15945', 'TopHat-Fusion', 'LOC101927318_AQP5', 'LOC101927318', 'chr12', '50356075', '-', 'AQP5', 'chr12', '50357299', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A1-A0SO-01A', '', '301', '', 'Out-of-Frame', 'Intra-chr', '12q13.12', '12q13.12', '', '', '', '', '', '', ''), ('15946', 'TopHat-Fusion', 'ANXA2_RNF114', 'ANXA2', 'chr15', '60643391', '-', 'RNF114', 'chr20', '48565784', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12P-01A', '', '1462', '', 'In-Frame', 'Inter-chr', '15q22.2', '20q13.13', '', '', '', '', '', '', ''), ('15947', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48265892', '-', 'COL1A2', 'chr7', '94038658', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24V-01A', '', '215', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('15948', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48273303', '-', 'COL1A2', 'chr7', '94043531', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24V-01A', '', '369', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('15949', 'TopHat-Fusion', 'FARSA_NFIX', 'FARSA', 'chr19', '13043962', '-', 'NFIX', 'chr19', '13186484', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A0G0-01A', '', '205', '', 'Out-of-Frame', 'Intra-chr', '19p13.2', '19p13.2', '', '', '', '', '', '', ''), ('15950', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189856953', '+', 'COL1A1', 'chr17', '48266880', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24V-01A', '', '104', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('15951', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189868187', '+', 'COL1A1', 'chr17', '48272674', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24V-01A', '', '207', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('15952', 'TopHat-Fusion', 'COL1A2_COL3A1', 'COL1A2', 'chr7', '94051235', '+', 'COL3A1', 'chr2', '189867688', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24V-01A', '', '127', '', 'In-Frame', 'Inter-chr', '7q21.3', '2q32.2', '', '', '', '', '', '', ''), ('15953', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94035614', '+', 'COL1A1', 'chr17', '48272460', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24V-01A', '', '178', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('15954', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94053754', '+', 'COL1A1', 'chr17', '48272460', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24V-01A', '', '404', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('15955', 'TopHat-Fusion', 'KCNQ3_NDRG1', 'KCNQ3', 'chr8', '133310284', '-', 'NDRG1', 'chr8', '134266781', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A7VB-01A', '', '197', '', 'Out-of-Frame', 'Intra-chr', '8q24.22', '8q24.22', '', '', '', '', '', '', ''), ('15956', 'TopHat-Fusion', 'KCNQ3_NDRG1', 'KCNQ3', 'chr8', '133310371', '-', 'NDRG1', 'chr8', '134266781', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A7VB-01A', '', '197', '', 'Out-of-Frame', 'Intra-chr', '8q24.22', '8q24.22', '', '', '', '', '', '', ''), ('15957', 'TopHat-Fusion', 'ACER3_NARS2', 'ACER3', 'chr11', '76572122', '+', 'NARS2', 'chr11', '78177058', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A0G0-01A', '', '230', '', '', 'Intra-chr', '11q13.5', '11q14.1', '', '', '', '', '', '', ''), ('15958', 'TopHat-Fusion', 'ACER3_NARS2', 'ACER3', 'chr11', '76572122', '+', 'NARS2', 'chr11', '78180358', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A0G0-01A', '', '230', '', '', 'Intra-chr', '11q13.5', '11q14.1', '', '', '', '', '', '', ''), ('15959', 'TopHat-Fusion', 'TVP23A_CIITA', 'TVP23A', 'chr16', '10867130', '-', 'CIITA', 'chr16', '10997751', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1PB-01A', '', '204', '', 'Out-of-Frame', 'Intra-chr', '16p13.13', '16p13.13', '', '', '', '', '', '', ''), ('15960', 'TopHat-Fusion', 'TVP23A_CIITA', 'TVP23A', 'chr16', '10886578', '-', 'CIITA', 'chr16', '10996657', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1PB-01A', '', '634', '', 'Out-of-Frame', 'Intra-chr', '16p13.13', '16p13.13', '', '', '', '', '', '', ''), ('15961', 'TopHat-Fusion', 'TVP23A_CIITA', 'TVP23A', 'chr16', '10892862', '-', 'CIITA', 'chr16', '10996657', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1PB-01A', '', '634', '', 'Out-of-Frame', 'Intra-chr', '16p13.13', '16p13.13', '', '', '', '', '', '', ''), ('15962', 'TopHat-Fusion', 'ETV6_YTHDF2', 'ETV6', 'chr12', '11992237', '+', 'YTHDF2', 'chr1', '29095440', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1PB-01A', '', '539', '', 'Out-of-Frame', 'Inter-chr', '12p13.2', '1p35.3', '', '', '', '', '', '', ''), ('15963', 'TopHat-Fusion', 'KIT_EXOC1', 'KIT', 'chr4', '55561819', '+', 'EXOC1', 'chr4', '56744231', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1B0-01A', '', '325', '', 'Out-of-Frame', 'Intra-chr', '4q12', '4q12', '', '', '', '', '', '', ''), ('15964', 'TopHat-Fusion', 'KIT_EXOC1', 'KIT', 'chr4', '55565123', '+', 'EXOC1', 'chr4', '56745120', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1B0-01A', '', '325', '', 'In-Frame', 'Intra-chr', '4q12', '4q12', '', '', '', '', '', '', ''), ('15965', 'TopHat-Fusion', 'RARA_MYO1D', 'RARA', 'chr17', '38487647', '+', 'MYO1D', 'chr17', '31107801', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A09I-01A', '', '121', '', 'Out-of-Frame', 'Intra-chr', '17q21.2', '17q11.2', '', '', '', '', '', '', ''), ('15966', 'TopHat-Fusion', 'HEATR6_MIEN1', 'HEATR6', 'chr17', '58147562', '-', 'MIEN1', 'chr17', '37886515', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A09I-01A', '', '534', '', 'Out-of-Frame', 'Intra-chr', '17q23.1', '17q12', '', '', '', '', '', '', ''), ('15967', 'TopHat-Fusion', 'NSD1_LINC01476', 'NSD1', 'chr5', '176666865', '+', 'LINC01476', 'chr17', '57508280', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1B0-01A', '', '215', '', 'Out-of-Frame', 'Inter-chr', '5q35.3', '17q22', '', '', '', '', '', '', ''), ('15968', 'TopHat-Fusion', 'NSD1_LINC01476', 'NSD1', 'chr5', '176666865', '+', 'LINC01476', 'chr17', '57511881', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1B0-01A', '', '215', '', 'Out-of-Frame', 'Inter-chr', '5q35.3', '17q22', '', '', '', '', '', '', ''), ('15969', 'TopHat-Fusion', 'TSC2_NPW', 'TSC2', 'chr16', '2100486', '+', 'NPW', 'chr16', '2070126', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B1-01A', '', '103', '', 'Out-of-Frame', 'Intra-chr', '16p13.3', '16p13.3', '', '', '', '', '', '', ''), ('15970', 'TopHat-Fusion', 'TSC2_NPW', 'TSC2', 'chr16', '2100486', '+', 'NPW', 'chr16', '2070190', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B1-01A', '', '103', '', 'Out-of-Frame', 'Intra-chr', '16p13.3', '16p13.3', '', '', '', '', '', '', ''), ('15971', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94049585', '+', 'COL1A1', 'chr17', '48273891', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B1-01A', '', '114', '', 'Out-of-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('15972', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48273303', '-', 'COL1A2', 'chr7', '94043531', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B1-01A', '', '112', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('15973', 'TopHat-Fusion', 'DLG2_UNC45B', 'DLG2', 'chr11', '85195025', '-', 'UNC45B', 'chr17', '33478331', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A3OD-01B', '', '162', '', 'Out-of-Frame', 'Inter-chr', '11q14.1', '17q12', '', '', '', '', '', '', ''), ('15974', 'TopHat-Fusion', 'DLG2_UNC45B', 'DLG2', 'chr11', '85195044', '-', 'UNC45B', 'chr17', '33478298', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A3OD-01B', '', '162', '', 'In-Frame', 'Inter-chr', '11q14.1', '17q12', '', '', '', '', '', '', ''), ('15975', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B1-01A', '', '193', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('15976', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A42U-01A', '', '392', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('15977', 'TopHat-Fusion', 'PTPRK_THEMIS', 'PTPRK', 'chr6', '128505576', '-', 'THEMIS', 'chr6', '128031160', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A0FW-01A', '', '271', '', 'In-Frame', 'Intra-chr', '6q22.33', '6q22.33', '', '', '', '', '', '', ''), ('15978', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0T4-01A', '', '110', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('15979', 'TopHat-Fusion', 'TANC2_RGS9', 'TANC2', 'chr17', '61457186', '+', 'RGS9', 'chr17', '63223518', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A0FW-01A', '', '117', '', 'Out-of-Frame', 'Intra-chr', '17q23.3', '17q24.1', '', '', '', '', '', '', ''), ('15980', 'TopHat-Fusion', 'WBP11_MGP', 'WBP11', 'chr12', '14946664', '-', 'MGP', 'chr12', '15037178', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0D0-01A', '', '409', '', 'In-Frame', 'Intra-chr', '12p12.3', '12p12.3', '', '', '', '', '', '', ''), ('15981', 'TopHat-Fusion', 'SVIL-AS1_SVILP1', 'SVIL-AS1', 'chr10', '29752420', '-', 'SVILP1', 'chr10', '31001486', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0D0-01A', '', '125', '', 'Out-of-Frame', 'Intra-chr', '10p11.23', '10p11.23', '', '', '', '', '', '', ''), ('15982', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A26H-01A', '', '104', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('15983', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94049585', '+', 'COL1A1', 'chr17', '48273891', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1R5-01A', '', '116', '', 'Out-of-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('15984', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94050373', '+', 'COL1A1', 'chr17', '48267092', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1R5-01A', '', '117', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('15985', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94052427', '+', 'COL1A1', 'chr17', '48266891', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1R5-01A', '', '108', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('15986', 'TopHat-Fusion', 'GNE_ERP27', 'GNE', 'chr9', '36276890', '-', 'ERP27', 'chr12', '15073981', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A25F-01A', '', '324', '', 'In-Frame', 'Inter-chr', '9p13.3', '12p12.3', 'Kinase', '', '', '', '', '', ''), ('15987', 'TopHat-Fusion', 'OR51B5_TMEM258', 'OR51B5', 'chr11', '5383840', '-', 'TMEM258', 'chr11', '61557997', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0H6-01A', '', '179', '', 'Out-of-Frame', 'Intra-chr', '11p15.4', '11q12.2', '', '', '', '', '', '', ''), ('15988', 'TopHat-Fusion', 'SRPK2_NKAIN3', 'SRPK2', 'chr7', '104782531', '+', 'NKAIN3', 'chr8', '63777281', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A26H-01A', '', '100', '', 'Out-of-Frame', 'Inter-chr', '7q22.3', '8q12.3', '', '', '', '', '', '', ''), ('15989', 'TopHat-Fusion', 'MTG1_ZNF511', 'MTG1', 'chr10', '135216276', '+', 'ZNF511', 'chr10', '135126291', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A137-01A', '', '167', '', 'In-Frame', 'Intra-chr', '10q26.3', '10q26.3', '', '', '', '', '', '', ''), ('15990', 'TopHat-Fusion', 'RMDN1_ESRP1', 'RMDN1', 'chr8', '87519223', '-', 'ESRP1', 'chr8', '95674728', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A0TY-01A', '', '240', '', 'Out-of-Frame', 'Intra-chr', '8q21.3', '8q22.1', '', '', '', '', '', '', ''), ('15991', 'TopHat-Fusion', 'DDX60_DDX60L', 'DDX60', 'chr4', '169195084', '-', 'DDX60L', 'chr4', '169341530', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A1HO-01A', '', '106', '', 'Out-of-Frame', 'Intra-chr', '4q32.3', '4q32.3', '', '', '', '', '', '', ''), ('15992', 'TopHat-Fusion', 'DDX60L_DDX60', 'DDX60L', 'chr4', '169342910', '-', 'DDX60', 'chr4', '169194548', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A1HO-01A', '', '114', '', 'In-Frame', 'Intra-chr', '4q32.3', '4q32.3', '', '', '', '', '', '', ''), ('15993', 'TopHat-Fusion', 'ZNF232_RABEP1', 'ZNF232', 'chr17', '5014868', '-', 'RABEP1', 'chr17', '5284799', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-LL-A6FQ-01A', '', '156', '', 'Out-of-Frame', 'Intra-chr', '17p13.2', '17p13.2', '', '', '', '', '', '', ''), ('15994', 'TopHat-Fusion', 'TMEM135_AAMDC', 'TMEM135', 'chr11', '86802436', '+', 'AAMDC', 'chr11', '77553524', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A0FV-01A', '', '185', '', 'Out-of-Frame', 'Intra-chr', '11q14.2', '11q14.1', '', '', '', '', '', '', ''), ('15995', 'TopHat-Fusion', 'URGCP_CCDC129', 'URGCP', 'chr7', '43927013', '-', 'CCDC129', 'chr7', '31681789', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A0FV-01A', '', '139', '', 'In-Frame', 'Intra-chr', '7p13', '7p14.3', '', '', '', '', '', '', ''), ('15996', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24Q-01A', '', '5428', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('15997', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677323', '+', 'IGLL5', 'chr22', '23235959', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-PE-A5DD-01A', '', '203', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('15998', 'TopHat-Fusion', 'STX16-NPEPL1_MYT1', 'STX16-NPEPL1', 'chr20', '57227142', '+', 'MYT1', 'chr20', '62821415', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A0FV-01A', '', '169', '', 'CDS-3\'UTR', 'Intra-chr', '20q13.32', '20q13.33', '', '', '', '', '', '', ''), ('15999', 'TopHat-Fusion', 'LAPTM4A_SDC1', 'LAPTM4A', 'chr2', '20251170', '-', 'SDC1', 'chr2', '20405184', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A6IW-01A', '', '184', '', 'In-Frame', 'Intra-chr', '2p24.1', '2p24.1', '', '', '', '', '', '', ''), ('16000', 'TopHat-Fusion', 'HSPG2_LOC102724312', 'HSPG2', 'chr1', '22202017', '-', 'LOC102724312', 'chr1', '1368147', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24Q-01A', '', '126', '', 'Out-of-Frame', 'Intra-chr', '1p36.12', '1p36.33', '', '', '', '', '', '', ''), ('16001', 'TopHat-Fusion', 'HSPG2_LOC102724312', 'HSPG2', 'chr1', '22202121', '-', 'LOC102724312', 'chr1', '1366333', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24Q-01A', '', '126', '', 'Out-of-Frame', 'Intra-chr', '1p36.12', '1p36.33', '', '', '', '', '', '', ''), ('16002', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189868187', '+', 'COL1A1', 'chr17', '48272674', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A0FV-01A', '', '130', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16003', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189873946', '+', 'COL1A1', 'chr17', '48263867', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A0FV-01A', '', '102', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16004', 'TopHat-Fusion', 'CASC21_CASC8', 'CASC21', 'chr8', '128302304', '+', 'CASC8', 'chr8', '128433073', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A6IW-01A', '', '384', '', 'Out-of-Frame', 'Intra-chr', '8q24.21', '8q24.21', '', '', '', '', '', '', ''), ('16005', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94035614', '+', 'COL1A1', 'chr17', '48272460', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A0FV-01A', '', '111', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('16006', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48273303', '-', 'COL1A2', 'chr7', '94043531', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A0FV-01A', '', '176', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16007', 'TopHat-Fusion', 'CTBP1_FGFR3', 'CTBP1', 'chr4', '1225500', '-', 'FGFR3', 'chr4', '1803203', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1JG-01B', '', '615', '', 'Out-of-Frame', 'Intra-chr', '4p16.3', '4p16.3', 'Kinase', '', '', '', 'Transcription_Factor', '', ''), ('16008', 'TopHat-Fusion', 'CTBP1_FGFR3', 'CTBP1', 'chr4', '1225866', '-', 'FGFR3', 'chr4', '1801538', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1JG-01B', '', '615', '', 'Out-of-Frame', 'Intra-chr', '4p16.3', '4p16.3', 'Kinase', '', '', '', 'Transcription_Factor', '', ''), ('16009', 'TopHat-Fusion', 'CTBP1_FGFR3', 'CTBP1', 'chr4', '1231970', '-', 'FGFR3', 'chr4', '1802494', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1JG-01B', '', '615', '', 'Out-of-Frame', 'Intra-chr', '4p16.3', '4p16.3', 'Kinase', '', '', '', 'Transcription_Factor', '', ''), ('16010', 'TopHat-Fusion', 'KIAA1644_CELSR1', 'KIAA1644', 'chr22', '44667911', '-', 'CELSR1', 'chr22', '46831577', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A0U2-01A', '', '146', '', 'In-Frame', 'Intra-chr', '22q13.31', '22q13.31', '', '', '', '', '', '', ''), ('16011', 'TopHat-Fusion', 'C2orf54_LINC01512', 'C2orf54', 'chr2', '241829421', '-', 'LINC01512', 'chr6', '43899912', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1JG-01B', '', '135', '', 'Out-of-Frame', 'Inter-chr', '2q37.3', '6p21.1', '', '', '', '', '', '', ''), ('16012', 'TopHat-Fusion', 'CARTPT_PIP', 'CARTPT', 'chr5', '71015706', '-', 'PIP', 'chr7', '142829221', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XV-01A', '', '262', '', 'In-Frame', 'Inter-chr', '5q13.2', '7q34', '', '', '', '', '', '', ''), ('16013', 'TopHat-Fusion', 'THBS1_FSIP1', 'THBS1', 'chr15', '39886255', '-', 'FSIP1', 'chr15', '39910445', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24H-01A', '', '157', '', 'Out-of-Frame', 'Intra-chr', '15q14', '15q14', '', '', '', '', '', '', ''), ('16014', 'TopHat-Fusion', 'PCDHA4_PCDHA10', 'PCDHA4', 'chr5', '140203711', '+', 'PCDHA10', 'chr5', '140358533', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A0U2-01A', '', '108', '', 'Out-of-Frame', 'Intra-chr', '5q31.3', '5q31.3', '', '', '', '', '', '', ''), ('16015', 'TopHat-Fusion', 'PCDHA4_PCDHA10', 'PCDHA4', 'chr5', '140210069', '+', 'PCDHA10', 'chr5', '140358533', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A0U2-01A', '', '108', '', 'In-Frame', 'Intra-chr', '5q31.3', '5q31.3', '', '', '', '', '', '', ''), ('16016', 'TopHat-Fusion', 'SCARB2_SHROOM3', 'SCARB2', 'chr4', '77091019', '-', 'SHROOM3', 'chr4', '77679744', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1JG-01B', '', '145', '', 'Out-of-Frame', 'Intra-chr', '4q21.1', '4q21.1', '', '', '', '', '', '', ''), ('16017', 'TopHat-Fusion', 'DNAJC1_LOC100507377', 'DNAJC1', 'chr10', '22193450', '-', 'LOC100507377', 'chr12', '74668732', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A5QN-01A', '', '160', '', 'CDS-3\'UTR', 'Inter-chr', '10p12.31', '12q21.1', '', '', '', '', '', '', ''), ('16018', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48273303', '-', 'COL1A2', 'chr7', '94043531', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A0JA-01A', '', '114', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16019', 'TopHat-Fusion', 'WIPF2_SP2-AS1', 'WIPF2', 'chr17', '38375743', '+', 'SP2-AS1', 'chr17', '46000327', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A6SD-01A', '', '801', '', '5\'UTR-CDS', 'Intra-chr', '17q21.1', '17q21.32', '', '', '', '', '', '', ''), ('16020', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AO-01A', '', '203', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16021', 'TopHat-Fusion', 'LRRC59_NUP107', 'LRRC59', 'chr17', '48469758', '-', 'NUP107', 'chr12', '69135592', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A0A7-01A', '', '1319', '', 'In-Frame', 'Inter-chr', '17q21.33', '12q15', '', '', '', '', '', '', ''), ('16022', 'TopHat-Fusion', 'NAP1L1_LOC643339', 'NAP1L1', 'chr12', '76461149', '-', 'LOC643339', 'chr12', '93475363', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A0A7-01A', '', '1628', '', '', 'Intra-chr', '12q21.2', '12q22', '', '', '', '', '', '', ''), ('16023', 'TopHat-Fusion', 'NAP1L1_LOC643339', 'NAP1L1', 'chr12', '76461150', '-', 'LOC643339', 'chr12', '93485115', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A0A7-01A', '', '1674', '', '', 'Intra-chr', '12q21.2', '12q22', '', '', '', '', '', '', ''), ('16024', 'TopHat-Fusion', 'USP22_MYH10', 'USP22', 'chr17', '20919064', '-', 'MYH10', 'chr17', '8508299', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A093-01A', '', '106', '', 'Out-of-Frame', 'Intra-chr', '17p11.2', '17p13.1', '', '', '', '', '', '', ''), ('16025', 'TopHat-Fusion', 'EPC1_PTGR2', 'EPC1', 'chr10', '32635690', '-', 'PTGR2', 'chr14', '74340725', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0C7-01B', '', '160', '', 'In-Frame', 'Inter-chr', '10p11.22', '14q24.3', '', '', '', '', '', '', ''), ('16026', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48270000', '-', 'COL1A2', 'chr7', '94052286', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A093-01A', '', '144', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16027', 'TopHat-Fusion', 'MSL1_LINC01499', 'MSL1', 'chr17', '38289361', '+', 'LINC01499', 'chr11', '41756221', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0DD-01A', '', '390', '', 'Out-of-Frame', 'Inter-chr', '17q21.1', '11p12', '', '', '', '', '', '', ''), ('16028', 'TopHat-Fusion', 'RSF1_TP53TG3HP', 'RSF1', 'chr11', '77451775', '-', 'TP53TG3HP', 'chr16', '34739784', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A1FX-01A', '', '154', '', 'Out-of-Frame', 'Inter-chr', '11q14.1', '16p11.1', '', '', '', '', '', '', ''), ('16029', 'TopHat-Fusion', 'CD9_ADAMTS12', 'CD9', 'chr12', '6334699', '+', 'ADAMTS12', 'chr5', '33729891', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A4SD-01A', '', '216', '', 'Out-of-Frame', 'Inter-chr', '12p13.31', '5p13.3', '', '', '', '', '', '', ''), ('16030', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94047863', '+', 'COL1A1', 'chr17', '48265961', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A093-01A', '', '140', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('16031', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94049586', '+', 'COL1A1', 'chr17', '48273890', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A093-01A', '', '128', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('16032', 'TopHat-Fusion', 'PPFIA1_CBL', 'PPFIA1', 'chr11', '70192689', '+', 'CBL', 'chr11', '119103405', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A1FX-01A', '', '113', '', 'Out-of-Frame', 'Intra-chr', '11q13.3', '11q23.3', '', '', '', '', '', '', ''), ('16033', 'TopHat-Fusion', 'PPFIA1_CBL', 'PPFIA1', 'chr11', '70194525', '+', 'CBL', 'chr11', '119102792', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A1FX-01A', '', '113', '', 'Out-of-Frame', 'Intra-chr', '11q13.3', '11q23.3', '', '', '', '', '', '', ''), ('16034', 'TopHat-Fusion', 'PPFIA1_CBL', 'PPFIA1', 'chr11', '70196144', '+', 'CBL', 'chr11', '119102792', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A1FX-01A', '', '113', '', 'In-Frame', 'Intra-chr', '11q13.3', '11q23.3', '', '', '', '', '', '', ''), ('16035', 'TopHat-Fusion', 'MZF1-AS1_UBE2M', 'MZF1-AS1', 'chr19', '59070775', '+', 'UBE2M', 'chr19', '59068523', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A0A7-01A', '', '117', '', 'Out-of-Frame', 'Intra-chr', '19q13.43', '19q13.43', '', '', '', '', '', '', ''), ('16036', 'TopHat-Fusion', 'PILRA_PILRB', 'PILRA', 'chr7', '99972055', '+', 'PILRB', 'chr7', '99964715', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AQ-A04J-01A', '', '185', '', 'In-Frame', 'Intra-chr', '7q22.1', '7q22.1', '', '', '', '', '', '', ''), ('16037', 'TopHat-Fusion', 'PILRA_PILRB', 'PILRA', 'chr7', '99972055', '+', 'PILRB', 'chr7', '99964715', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0C7-01B', '', '191', '', 'In-Frame', 'Intra-chr', '7q22.1', '7q22.1', '', '', '', '', '', '', ''), ('16038', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A1FX-01A', '', '240', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16039', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0GY-01A', '', '168', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16040', 'TopHat-Fusion', 'AAMDC_TENM4', 'AAMDC', 'chr11', '77594997', '+', 'TENM4', 'chr11', '78600829', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0HY-01A', '', '364', '', 'Out-of-Frame', 'Intra-chr', '11q14.1', '11q14.1', '', '', '', '', '', '', ''), ('16041', 'TopHat-Fusion', 'ZMYND8_GTPBP1', 'ZMYND8', 'chr20', '45848908', '-', 'GTPBP1', 'chr22', '39111911', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1PF-01A', '', '118', '', 'In-Frame', 'Inter-chr', '20q13.12', '22q13.1', '', '', '', '', '', '', ''), ('16042', 'TopHat-Fusion', 'PIK3R3_RAD54L', 'PIK3R3', 'chr1', '46546313', '-', 'RAD54L', 'chr1', '46733348', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A135-01A', '', '134', '', 'Out-of-Frame', 'Intra-chr', '1p34.1', '1p34.1', 'Kinase', '', '', '', '', '', ''), ('16043', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48270000', '-', 'COL1A2', 'chr7', '94052286', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A141-01A', '', '173', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16044', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48273303', '-', 'COL1A2', 'chr7', '94043531', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A141-01A', '', '130', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16045', 'TopHat-Fusion', 'PCBP2_SLC9A6', 'PCBP2', 'chr12', '53865590', '+', 'SLC9A6', 'chrX', '135113365', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0DX-01A', '', '292', '', 'Out-of-Frame', 'Inter-chr', '12q13.13', 'Xq26.3', '', '', '', '', '', '', ''), ('16046', 'TopHat-Fusion', 'ABCC8_CAPRIN1', 'ABCC8', 'chr11', '17439844', '-', 'CAPRIN1', 'chr11', '34113602', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A07R-01A', '', '163', '', 'Out-of-Frame', 'Intra-chr', '11p15.1', '11p13', '', '', '', '', '', '', ''), ('16047', 'TopHat-Fusion', 'ERC1_YY1', 'ERC1', 'chr12', '1219395', '+', 'YY1', 'chr14', '100728802', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0HY-01A', '', '160', '', 'Out-of-Frame', 'Inter-chr', '12p13.33', '14q32.2', '', '', '', '', '', '', ''), ('16048', 'TopHat-Fusion', 'COL1A1_COL3A1', 'COL1A1', 'chr17', '48266778', '-', 'COL3A1', 'chr2', '189864061', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A141-01A', '', '100', '', 'In-Frame', 'Inter-chr', '17q21.33', '2q32.2', '', '', '', '', '', '', ''), ('16049', 'TopHat-Fusion', 'ATL2_HNRNPLL', 'ATL2', 'chr2', '38604284', '-', 'HNRNPLL', 'chr2', '38800568', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A07R-01A', '', '416', '', 'Out-of-Frame', 'Intra-chr', '2p22.1', '2p22.1', '', '', '', '', '', '', ''), ('16050', 'TopHat-Fusion', 'DNAJC1_LOC100507377', 'DNAJC1', 'chr10', '22193450', '-', 'LOC100507377', 'chr12', '74668732', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-LL-A442-01A', '', '279', '', 'CDS-3\'UTR', 'Inter-chr', '10p12.31', '12q21.1', '', '', '', '', '', '', ''), ('16051', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A07R-01A', '', '116', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('16052', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15R-01A', '', '132', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('16053', 'TopHat-Fusion', 'WDR11_TACC2', 'WDR11', 'chr10', '122615694', '+', 'TACC2', 'chr10', '123880237', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A18J-01A', '', '196', '', 'In-Frame', 'Intra-chr', '10q26.12', '10q26.13', '', '', '', '', '', '', ''), ('16054', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0BA-01A', '', '4323', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16055', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677323', '+', 'IGLL5', 'chr22', '23235962', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A18V-06A', '', '163', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16056', 'TopHat-Fusion', 'BCAR3_CDC34', 'BCAR3', 'chr1', '94075327', '-', 'CDC34', 'chr19', '537146', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A5ZV-01A', '', '141', '', 'Out-of-Frame', 'Inter-chr', '1p22.1', '19p13.3', '', '', '', '', '', '', ''), ('16057', 'TopHat-Fusion', 'MVP_KIF22', 'MVP', 'chr16', '29851779', '+', 'KIF22', 'chr16', '29814769', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A18V-06A', '', '206', '', 'In-Frame', 'Intra-chr', '16p11.2', '16p11.2', '', '', '', '', '', '', ''), ('16058', 'TopHat-Fusion', 'CTSB_DOCK5', 'CTSB', 'chr8', '11705575', '-', 'DOCK5', 'chr8', '25108759', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15K-01A', '', '401', '', 'In-Frame', 'Intra-chr', '8p23.1', '8p21.2', '', '', '', '', '', '', ''), ('16059', 'TopHat-Fusion', 'CTSB_DOCK5', 'CTSB', 'chr8', '11705575', '-', 'DOCK5', 'chr8', '25108903', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15K-01A', '', '401', '', 'In-Frame', 'Intra-chr', '8p23.1', '8p21.2', '', '', '', '', '', '', ''), ('16060', 'TopHat-Fusion', 'TMEM45A_CMSS1', 'TMEM45A', 'chr3', '100211771', '+', 'CMSS1', 'chr3', '99879273', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A5ZV-01A', '', '124', '', 'Out-of-Frame', 'Intra-chr', '3q12.2', '3q12.1', '', '', '', '', '', '', '');
INSERT INTO `ChimerSeq_dump` VALUES ('16061', 'TopHat-Fusion', 'TMEM45A_CMSS1', 'TMEM45A', 'chr3', '100238451', '+', 'CMSS1', 'chr3', '99879273', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A5ZV-01A', '', '100', '', 'Out-of-Frame', 'Intra-chr', '3q12.2', '3q12.1', '', '', '', '', '', '', ''), ('16062', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48265892', '-', 'COL1A2', 'chr7', '94038658', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A0JF-01A', '', '163', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16063', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48273303', '-', 'COL1A2', 'chr7', '94043531', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A0JF-01A', '', '259', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16064', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189856953', '+', 'COL1A1', 'chr17', '48266880', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A0JF-01A', '', '128', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16065', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189868187', '+', 'COL1A1', 'chr17', '48272674', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A0JF-01A', '', '190', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16066', 'TopHat-Fusion', 'TRIT1_CHI3L2', 'TRIT1', 'chr1', '40348989', '-', 'CHI3L2', 'chr1', '111772473', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-XX-A89A-01A', '', '117', '', 'Out-of-Frame', 'Intra-chr', '1p34.2', '1p13.3', '', '', '', '', '', '', ''), ('16067', 'TopHat-Fusion', 'MYSM1_ALG14', 'MYSM1', 'chr1', '59165654', '-', 'ALG14', 'chr1', '95449186', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A5ZV-01A', '', '134', '', 'Out-of-Frame', 'Intra-chr', '1p32.1', '1p21.3', '', '', '', '', '', '', ''), ('16068', 'TopHat-Fusion', 'MYSM1_ALG14', 'MYSM1', 'chr1', '59165656', '-', 'ALG14', 'chr1', '95448861', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A5ZV-01A', '', '134', '', 'Out-of-Frame', 'Intra-chr', '1p32.1', '1p21.3', '', '', '', '', '', '', ''), ('16069', 'TopHat-Fusion', 'OLFM2_TBC1D21', 'OLFM2', 'chr19', '10046979', '-', 'TBC1D21', 'chr15', '74173984', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A0AR-01A', '', '107', '', 'In-Frame', 'Inter-chr', '19p13.2', '15q24.1', '', '', '', '', '', '', ''), ('16070', 'TopHat-Fusion', 'PILRA_PILRB', 'PILRA', 'chr7', '99972055', '+', 'PILRB', 'chr7', '99964715', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A18J-01A', '', '148', '', 'In-Frame', 'Intra-chr', '7q22.1', '7q22.1', '', '', '', '', '', '', ''), ('16071', 'TopHat-Fusion', 'SAFB2_SAFB', 'SAFB2', 'chr19', '5610005', '-', 'SAFB', 'chr19', '5653125', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I5-01A', '', '300', '', 'In-Frame', 'Intra-chr', '19p13.3', '19p13.3', '', '', '', '', '', '', ''), ('16072', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677320', '+', 'IGLL5', 'chr22', '23235959', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A3KC-01A', '', '110', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16073', 'TopHat-Fusion', 'CTNNA1_SIL1', 'CTNNA1', 'chr5', '138119060', '+', 'SIL1', 'chr5', '138384714', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1P8-01A', '', '147', '', 'Out-of-Frame', 'Intra-chr', '5q31.2', '5q31.2', '', '', '', '', '', '', ''), ('16074', 'TopHat-Fusion', 'CTNNA1_SIL1', 'CTNNA1', 'chr5', '138119060', '+', 'SIL1', 'chr5', '138386690', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1P8-01A', '', '147', '', 'In-Frame', 'Intra-chr', '5q31.2', '5q31.2', '', '', '', '', '', '', ''), ('16075', 'TopHat-Fusion', 'ARFGEF1_LINC01111', 'ARFGEF1', 'chr8', '68137137', '-', 'LINC01111', 'chr8', '77431034', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12U-01A', '', '138', '', 'Out-of-Frame', 'Intra-chr', '8q13.2', '8q21.11', '', '', '', '', '', '', ''), ('16076', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48265892', '-', 'COL1A2', 'chr7', '94038658', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A1-A0SI-01A', '', '129', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16077', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48270000', '-', 'COL1A2', 'chr7', '94052286', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A1-A0SI-01A', '', '300', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16078', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94035614', '+', 'COL1A1', 'chr17', '48272460', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A1-A0SI-01A', '', '125', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('16079', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94047863', '+', 'COL1A1', 'chr17', '48265961', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A1-A0SI-01A', '', '294', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('16080', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94049586', '+', 'COL1A1', 'chr17', '48273890', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A1-A0SI-01A', '', '250', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('16081', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94052427', '+', 'COL1A1', 'chr17', '48266891', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A1-A0SI-01A', '', '250', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('16082', 'TopHat-Fusion', 'CLCN7_TCEB2', 'CLCN7', 'chr16', '1500511', '+', 'TCEB2', 'chr16', '2827127', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1IZ-01A', '', '102', '', 'In-Frame', 'Intra-chr', '16p13.3', '16p13.3', '', '', '', '', '', '', ''), ('16083', 'TopHat-Fusion', 'CLCN7_TCEB2', 'CLCN7', 'chr16', '1500598', '+', 'TCEB2', 'chr16', '2827127', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1IZ-01A', '', '102', '', 'In-Frame', 'Intra-chr', '16p13.3', '16p13.3', '', '', '', '', '', '', ''), ('16084', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189868187', '+', 'COL1A1', 'chr17', '48272674', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A1-A0SI-01A', '', '144', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16085', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189871715', '+', 'COL1A1', 'chr17', '48264897', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A1-A0SI-01A', '', '124', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16086', 'TopHat-Fusion', 'C11orf49_ASNA1', 'C11orf49', 'chr11', '47063161', '+', 'ASNA1', 'chr19', '12856311', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A5UP-01A', '', '148', '', 'In-Frame', 'Inter-chr', '11p11.2', '19p13.2', '', '', '', '', '', '', ''), ('16087', 'TopHat-Fusion', 'STAT5B_STAT5A', 'STAT5B', 'chr17', '40369394', '-', 'STAT5A', 'chr17', '40456547', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A0A1-01A', '', '297', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16088', 'TopHat-Fusion', 'HCG17_HLA-C', 'HCG17', 'chr6', '30228110', '-', 'HLA-C', 'chr6', '31239375', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A1FB-11A', '', '140', '', 'Out-of-Frame', 'Intra-chr', '6p22.1', '6p21.33', '', '', '', '', '', '', ''), ('16089', 'TopHat-Fusion', 'HCG17_HLA-C', 'HCG17', 'chr6', '30228110', '-', 'HLA-C', 'chr6', '31239375', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1PD-01A', '', '136', '', 'Out-of-Frame', 'Intra-chr', '6p22.1', '6p21.33', '', '', '', '', '', '', ''), ('16090', 'TopHat-Fusion', 'TRIM24_SVOPL', 'TRIM24', 'chr7', '138255747', '+', 'SVOPL', 'chr7', '138281274', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A1HM-01A', '', '136', '', 'In-Frame', 'Intra-chr', '7q34', '7q34', 'Kinase', '', '', '', '', '', ''), ('16091', 'TopHat-Fusion', 'TRIM24_SVOPL', 'TRIM24', 'chr7', '138258386', '+', 'SVOPL', 'chr7', '138281274', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A1HM-01A', '', '136', '', 'Out-of-Frame', 'Intra-chr', '7q34', '7q34', 'Kinase', '', '', '', '', '', ''), ('16092', 'TopHat-Fusion', 'BAG4_NEDD8-MDP1', 'BAG4', 'chr8', '38034656', '+', 'NEDD8-MDP1', 'chr14', '24687636', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1PH-01A', '', '299', '', 'In-Frame', 'Inter-chr', '8p11.23', '14q12', '', '', '', '', '', '', ''), ('16093', 'TopHat-Fusion', 'WHSC1L1_ADAM32', 'WHSC1L1', 'chr8', '38138984', '-', 'ADAM32', 'chr8', '39131830', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1PH-01A', '', '109', '', 'Out-of-Frame', 'Intra-chr', '8p11.23', '8p11.22', '', '', '', '', '', '', ''), ('16094', 'TopHat-Fusion', 'FARSB_ACSL3', 'FARSB', 'chr2', '223512699', '-', 'ACSL3', 'chr2', '223789312', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0RX-01A', '', '144', '', 'Out-of-Frame', 'Intra-chr', '2q36.1', '2q36.1', '', '', '', '', '', '', ''), ('16095', 'TopHat-Fusion', 'FARSB_ACSL3', 'FARSB', 'chr2', '223515004', '-', 'ACSL3', 'chr2', '223789312', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0RX-01A', '', '142', '', 'Out-of-Frame', 'Intra-chr', '2q36.1', '2q36.1', '', '', '', '', '', '', ''), ('16096', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1PH-01A', '', '171', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('16097', 'TopHat-Fusion', 'SSR1_CAGE1', 'SSR1', 'chr6', '7301542', '-', 'CAGE1', 'chr6', '7330120', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0CX-01A', '', '2299', '', 'Out-of-Frame', 'Intra-chr', '6p24.3', '6p24.3', '', '', '', '', '', '', ''), ('16098', 'TopHat-Fusion', 'OPHN1_EDA', 'OPHN1', 'chrX', '67652708', '-', 'EDA', 'chrX', '68923667', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A04P-01A', '', '133', '', 'In-Frame', 'Intra-chr', 'Xq12', 'Xq13.1', '', '', '', '', '', '', ''), ('16099', 'TopHat-Fusion', 'SMIM13_NOL7', 'SMIM13', 'chr6', '11105862', '+', 'NOL7', 'chr6', '13618032', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0CX-01A', '', '262', '', 'Out-of-Frame', 'Intra-chr', '6p24.2', '6p23', '', '', '', '', '', '', ''), ('16100', 'TopHat-Fusion', 'EIF2AK2_CEBPZ', 'EIF2AK2', 'chr2', '37349648', '-', 'CEBPZ', 'chr2', '37429045', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A04P-01A', '', '140', '', 'Out-of-Frame', 'Intra-chr', '2p22.2', '2p22.2', '', '', '', '', '', '', ''), ('16101', 'TopHat-Fusion', 'KCCAT211_KCNMB2-AS1', 'KCCAT211', 'chr3', '177538676', '+', 'KCNMB2-AS1', 'chr3', '178467023', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A04P-01A', '', '153', '', 'Out-of-Frame', 'Intra-chr', '3q26.32', '3q26.32', '', '', '', '', '', '', ''), ('16102', 'TopHat-Fusion', 'KCCAT211_KCNMB2-AS1', 'KCCAT211', 'chr3', '177545617', '+', 'KCNMB2-AS1', 'chr3', '178467023', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A04P-01A', '', '107', '', 'Out-of-Frame', 'Intra-chr', '3q26.32', '3q26.32', '', '', '', '', '', '', ''), ('16103', 'TopHat-Fusion', 'TSC2_KCTD5', 'TSC2', 'chr16', '2112120', '+', 'KCTD5', 'chr16', '2732706', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A425-01A', '', '139', '', 'Out-of-Frame', 'Intra-chr', '16p13.3', '16p13.3', '', '', '', '', '', '', ''), ('16104', 'TopHat-Fusion', 'CTNND1_TMX2-CTNND1', 'CTNND1', 'chr11', '57529517', '+', 'TMX2-CTNND1', 'chr11', '57505079', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AH-01A', '', '106', '', '5\'UTR-5\'UTR', 'Intra-chr', '11q12.1', '11q12.1', '', '', '', '', '', '', ''), ('16105', 'TopHat-Fusion', 'PILRA_PILRB', 'PILRA', 'chr7', '99972055', '+', 'PILRB', 'chr7', '99964715', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A6VW-01A', '', '266', '', 'In-Frame', 'Intra-chr', '7q22.1', '7q22.1', '', '', '', '', '', '', ''), ('16106', 'TopHat-Fusion', 'PILRA_PILRB', 'PILRA', 'chr7', '99972055', '+', 'PILRB', 'chr7', '99964715', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AK-01A', '', '247', '', 'In-Frame', 'Intra-chr', '7q22.1', '7q22.1', '', '', '', '', '', '', ''), ('16107', 'TopHat-Fusion', 'PILRA_PILRB', 'PILRA', 'chr7', '99972055', '+', 'PILRB', 'chr7', '99964715', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0DP-01A', '', '150', '', 'In-Frame', 'Intra-chr', '7q22.1', '7q22.1', '', '', '', '', '', '', ''), ('16108', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0HW-01A', '', '172', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16109', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1PH-01A', '', '128', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16110', 'TopHat-Fusion', 'STARD13_LAMA5', 'STARD13', 'chr13', '33712616', '-', 'LAMA5', 'chr20', '60902287', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A0TX-01A', '', '548', '', 'In-Frame', 'Inter-chr', '13q13.1', '20q13.33', '', '', '', '', '', '', ''), ('16111', 'TopHat-Fusion', 'LINC01237_LOC728323', 'LINC01237', 'chr2', '242853047', '+', 'LOC728323', 'chr2', '243037037', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A18P-01A', '', '244', '', 'Out-of-Frame', 'Intra-chr', '2q37.3', '2q37.3', '', '', '', '', '', '', ''), ('16112', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677323', '+', 'IGLL5', 'chr22', '23235959', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0CL-01A', '', '1885', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16113', 'TopHat-Fusion', 'SNX13_STAP2', 'SNX13', 'chr7', '17979906', '-', 'STAP2', 'chr19', '4333812', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I9-01A', '', '143', '', 'In-Frame', 'Inter-chr', '7p21.1', '19p13.3', '', '', '', '', '', '', ''), ('16114', 'TopHat-Fusion', 'SNX13_STAP2', 'SNX13', 'chr7', '17979906', '-', 'STAP2', 'chr19', '4334040', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I9-01A', '', '143', '', 'In-Frame', 'Inter-chr', '7p21.1', '19p13.3', '', '', '', '', '', '', ''), ('16115', 'TopHat-Fusion', 'CLSTN2_PCOLCE2', 'CLSTN2', 'chr3', '140285051', '+', 'PCOLCE2', 'chr3', '142539886', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0CL-01A', '', '193', '', 'Out-of-Frame', 'Intra-chr', '3q23', '3q23', '', '', '', '', '', '', ''), ('16116', 'TopHat-Fusion', 'CASC21_CASC8', 'CASC21', 'chr8', '128302304', '+', 'CASC8', 'chr8', '128433073', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A0CE-01A', '', '187', '', 'Out-of-Frame', 'Intra-chr', '8q24.21', '8q24.21', '', '', '', '', '', '', ''), ('16117', 'TopHat-Fusion', 'TMPO_ANKS1B', 'TMPO', 'chr12', '98925615', '+', 'ANKS1B', 'chr12', '99425225', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0CM-01A', '', '118', '', 'Out-of-Frame', 'Intra-chr', '12q23.1', '12q23.1', '', '', '', '', '', '', ''), ('16118', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A18P-01A', '', '105', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('16119', 'TopHat-Fusion', 'ORMDL3_ZPBP2', 'ORMDL3', 'chr17', '38080282', '-', 'ZPBP2', 'chr17', '38026946', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I9-01A', '', '253', '', 'Out-of-Frame', 'Intra-chr', '17q12', '17q12', '', '', '', '', '', '', ''), ('16120', 'TopHat-Fusion', 'ORMDL3_ZPBP2', 'ORMDL3', 'chr17', '38080282', '-', 'ZPBP2', 'chr17', '38027716', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I9-01A', '', '253', '', 'Out-of-Frame', 'Intra-chr', '17q12', '17q12', '', '', '', '', '', '', ''), ('16121', 'TopHat-Fusion', 'ORMDL3_ZPBP2', 'ORMDL3', 'chr17', '38080282', '-', 'ZPBP2', 'chr17', '38029296', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I9-01A', '', '253', '', 'Out-of-Frame', 'Intra-chr', '17q12', '17q12', '', '', '', '', '', '', ''), ('16122', 'TopHat-Fusion', 'RCN1_VWA8', 'RCN1', 'chr11', '32123801', '+', 'VWA8', 'chr13', '42481721', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I9-01A', '', '136', '', 'Out-of-Frame', 'Inter-chr', '11p13', '13q14.11', '', '', '', '', '', '', ''), ('16123', 'TopHat-Fusion', 'ASTN2_PNMT', 'ASTN2', 'chr9', '120053604', '-', 'PNMT', 'chr17', '37825881', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I9-01A', '', '127', '', 'Out-of-Frame', 'Inter-chr', '9q33.1', '17q12', '', '', '', '', '', '', ''), ('16124', 'TopHat-Fusion', 'NCOA6_ZNF831', 'NCOA6', 'chr20', '33342524', '-', 'ZNF831', 'chr20', '57792784', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I9-01A', '', '100', '', 'In-Frame', 'Intra-chr', '20q11.22', '20q13.32', '', '', '', '', '', '', ''), ('16125', 'TopHat-Fusion', 'RARA_ZNF718', 'RARA', 'chr17', '38487647', '+', 'ZNF718', 'chr4', '59322', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A0TX-01A', '', '357', '', 'Out-of-Frame', 'Inter-chr', '17q21.2', '4p16.3', '', '', '', '', '', '', ''), ('16126', 'TopHat-Fusion', 'ATP1B1_SLC30A9', 'ATP1B1', 'chr1', '169099315', '+', 'SLC30A9', 'chr4', '42031782', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A0TX-01A', '', '106', '', 'Out-of-Frame', 'Inter-chr', '1q24.2', '4p13', '', '', '', '', '', '', ''), ('16127', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A03L-01A', '', '2101', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16128', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15C-01A', '', '203', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16129', 'TopHat-Fusion', 'C8orf37-AS1_CHST8', 'C8orf37-AS1', 'chr8', '96672381', '+', 'CHST8', 'chr19', '34113201', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A5XU-01A', '', '160', '', 'Out-of-Frame', 'Inter-chr', '8q22.1', '19q13.11', '', '', '', '', '', '', ''), ('16130', 'TopHat-Fusion', 'CSMD3_PLEC', 'CSMD3', 'chr8', '113408699', '-', 'PLEC', 'chr8', '145049344', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A5XU-01A', '', '553', '', 'Out-of-Frame', 'Intra-chr', '8q23.3', '8q24.3', '', '', '', '', '', '', ''), ('16131', 'TopHat-Fusion', 'CREBBP_NUBP1', 'CREBBP', 'chr16', '3819174', '-', 'NUBP1', 'chr16', '10846466', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IA-01A', '', '210', '', 'In-Frame', 'Intra-chr', '16p13.3', '16p13.13', '', '', '', '', 'Transcription_Factor', '', ''), ('16132', 'TopHat-Fusion', 'PPFIA1_RHOD', 'PPFIA1', 'chr11', '70118541', '+', 'RHOD', 'chr11', '66833366', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1J3-01A', '', '556', '', 'In-Frame', 'Intra-chr', '11q13.3', '11q13.2', '', '', '', '', '', '', ''), ('16133', 'TopHat-Fusion', 'EAF2_RGS9', 'EAF2', 'chr3', '121554237', '+', 'RGS9', 'chr17', '63221119', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A03L-01A', '', '273', '', 'Out-of-Frame', 'Inter-chr', '3q13.33', '17q24.1', '', '', '', '', '', '', ''), ('16134', 'TopHat-Fusion', 'VTCN1_NUP88', 'VTCN1', 'chr1', '117695712', '-', 'NUP88', 'chr17', '5292279', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A244-01A', '', '300', '', 'Out-of-Frame', 'Inter-chr', '1p13.1', '17p13.2', '', '', '', '', '', '', ''), ('16135', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1JF-01A', '', '102', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('16136', 'TopHat-Fusion', 'RARA_PSMD3', 'RARA', 'chr17', '38487647', '+', 'PSMD3', 'chr17', '38151206', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1J3-01A', '', '173', '', 'Out-of-Frame', 'Intra-chr', '17q21.2', '17q21.1', '', '', '', 'Receptor', 'Transcription_Factor', '', ''), ('16137', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48270000', '-', 'COL1A2', 'chr7', '94052286', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A03L-01A', '', '101', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16138', 'TopHat-Fusion', 'POP1_TRPS1', 'POP1', 'chr8', '99135706', '+', 'TRPS1', 'chr8', '116426301', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A5XU-01A', '', '165', '', 'Out-of-Frame', 'Intra-chr', '8q22.2', '8q23.3', '', '', '', '', '', '', ''), ('16139', 'TopHat-Fusion', 'CALN1_TBL2', 'CALN1', 'chr7', '71418127', '-', 'TBL2', 'chr7', '72988267', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OK-A5Q2-01A', '', '108', '', 'In-Frame', 'Intra-chr', '7q11.22', '7q11.23', '', '', '', '', '', '', ''), ('16140', 'TopHat-Fusion', 'CALN1_TBL2', 'CALN1', 'chr7', '71422116', '-', 'TBL2', 'chr7', '72988290', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OK-A5Q2-01A', '', '108', '', 'In-Frame', 'Intra-chr', '7q11.22', '7q11.23', '', '', '', '', '', '', ''), ('16141', 'TopHat-Fusion', 'DLG2_UNC45B', 'DLG2', 'chr11', '85195025', '-', 'UNC45B', 'chr17', '33478331', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A3QQ-01B', '', '279', '', 'Out-of-Frame', 'Inter-chr', '11q14.1', '17q12', '', '', '', '', '', '', ''), ('16142', 'TopHat-Fusion', 'HCG17_HLA-C', 'HCG17', 'chr6', '30228110', '-', 'HLA-C', 'chr6', '31239375', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A66N-01A', '', '133', '', 'Out-of-Frame', 'Intra-chr', '6p22.1', '6p21.33', '', '', '', '', '', '', ''), ('16143', 'TopHat-Fusion', 'WDR12_ASB7', 'WDR12', 'chr2', '203747458', '+', 'ASB7', 'chr15', '101185681', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A244-01A', '', '123', '', 'Out-of-Frame', 'Inter-chr', '2q33.2', '15q26.3', '', '', '', '', '', '', ''), ('16144', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1JC-01A', '', '103', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16145', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A27L-01A', '', '139', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16146', 'TopHat-Fusion', 'KDM2A_RPS6KB2', 'KDM2A', 'chr11', '66888828', '+', 'RPS6KB2', 'chr11', '67200810', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AY-01A', '', '182', '', 'In-Frame', 'Intra-chr', '11q13.2', '11q13.2', 'Kinase', '', '', '', '', '', ''), ('16147', 'TopHat-Fusion', 'MBD2_DOCK2', 'MBD2', 'chr18', '51714083', '-', 'DOCK2', 'chr5', '169502950', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AY-01A', '', '141', '', 'Out-of-Frame', 'Inter-chr', '18q21.2', '5q35.1', '', '', '', '', '', '', ''), ('16148', 'TopHat-Fusion', 'MBD2_DOCK2', 'MBD2', 'chr18', '51715243', '-', 'DOCK2', 'chr5', '169502950', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AY-01A', '', '141', '', 'In-Frame', 'Inter-chr', '18q21.2', '5q35.1', '', '', '', '', '', '', ''), ('16149', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14S-01A', '', '125', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16150', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A1ES-06A', '', '102', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('16151', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1JC-01A', '', '154', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('16152', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14S-01A', '', '159', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('16153', 'TopHat-Fusion', 'ECE1_PTPRF', 'ECE1', 'chr1', '21631384', '-', 'PTPRF', 'chr1', '44019611', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5RZ-01A', '', '626', '', 'In-Frame', 'Intra-chr', '1p36.12', '1p34.2', '', '', '', '', '', '', ''), ('16154', 'TopHat-Fusion', 'NTM_OPCML', 'NTM', 'chr11', '131781538', '+', 'OPCML', 'chr11', '132527216', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A1ES-06A', '', '106', '', 'Out-of-Frame', 'Intra-chr', '11q25', '11q25', '', '', '', '', '', '', ''), ('16155', 'TopHat-Fusion', 'INADL_SMG6', 'INADL', 'chr1', '62451503', '+', 'SMG6', 'chr17', '2206926', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5RZ-01A', '', '325', '', 'Out-of-Frame', 'Inter-chr', '1p31.3', '17p13.3', '', '', '', '', '', '', ''), ('16156', 'TopHat-Fusion', 'MMP10_MMP3', 'MMP10', 'chr11', '102647342', '-', 'MMP3', 'chr11', '102710982', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1N6-01A', '', '151', '', 'In-Frame', 'Intra-chr', '11q22.2', '11q22.2', '', '', '', '', '', '', ''), ('16157', 'TopHat-Fusion', 'MAP2K3_PLXDC1', 'MAP2K3', 'chr17', '21188280', '+', 'PLXDC1', 'chr17', '37263669', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5RZ-01A', '', '107', '', 'In-Frame', 'Intra-chr', '17p11.2', '17q12', '', '', '', '', '', '', ''), ('16158', 'TopHat-Fusion', 'MAP2K3_PLXDC1', 'MAP2K3', 'chr17', '21188280', '+', 'PLXDC1', 'chr17', '37267247', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5RZ-01A', '', '100', '', 'Out-of-Frame', 'Intra-chr', '17p11.2', '17q12', '', '', '', '', '', '', ''), ('16159', 'TopHat-Fusion', 'PILRA_PILRB', 'PILRA', 'chr7', '99972055', '+', 'PILRB', 'chr7', '99964715', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A27L-01A', '', '361', '', 'In-Frame', 'Intra-chr', '7q22.1', '7q22.1', '', '', '', '', '', '', ''), ('16160', 'TopHat-Fusion', 'MED1_ABCC3', 'MED1', 'chr17', '37604050', '-', 'ABCC3', 'chr17', '48733192', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0AW-01A', '', '517', '', 'In-Frame', 'Intra-chr', '17q12', '17q21.33', '', '', '', '', 'Transcription_Factor', '', ''), ('16161', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A209-11A', '', '203', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16162', 'TopHat-Fusion', 'SLC12A8_BFSP2', 'SLC12A8', 'chr3', '124930142', '-', 'BFSP2', 'chr3', '133169146', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XR-01A', '', '108', '', 'In-Frame', 'Intra-chr', '3q21.2', '3q22.1', '', '', '', '', '', '', ''), ('16163', 'TopHat-Fusion', 'RPS6KB1_VMP1', 'RPS6KB1', 'chr17', '57970685', '+', 'VMP1', 'chr17', '57915655', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-JL-A3YW-01A', '', '495', '', 'Out-of-Frame', 'Intra-chr', '17q23.1', '17q23.1', '', '', '', '', '', '', ''), ('16164', 'TopHat-Fusion', 'PPFIA1_PAPD5', 'PPFIA1', 'chr11', '70147270', '+', 'PAPD5', 'chr16', '50186942', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1J5-01A', '', '214', '', 'In-Frame', 'Inter-chr', '11q13.3', '16q12.1', '', '', '', '', '', '', ''), ('16165', 'TopHat-Fusion', 'PPFIA1_PAPD5', 'PPFIA1', 'chr11', '70147270', '+', 'PAPD5', 'chr16', '50188169', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1J5-01A', '', '214', '', 'In-Frame', 'Inter-chr', '11q13.3', '16q12.1', '', '', '', '', '', '', ''), ('16166', 'TopHat-Fusion', 'HCG17_HLA-C', 'HCG17', 'chr6', '30228110', '-', 'HLA-C', 'chr6', '31239375', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A092-01A', '', '187', '', 'Out-of-Frame', 'Intra-chr', '6p22.1', '6p21.33', '', '', '', '', '', '', ''), ('16167', 'TopHat-Fusion', 'PILRA_PILRB', 'PILRA', 'chr7', '99972055', '+', 'PILRB', 'chr7', '99964715', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0AW-01A', '', '130', '', 'In-Frame', 'Intra-chr', '7q22.1', '7q22.1', '', '', '', '', '', '', ''), ('16168', 'TopHat-Fusion', 'NUP210_H1FX-AS1', 'NUP210', 'chr3', '13418135', '-', 'H1FX-AS1', 'chr3', '129042446', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A3HO-01A', '', '109', '', 'CDS-5\'UTR', 'Intra-chr', '3p25.1', '3q21.3', '', '', '', '', '', '', ''), ('16169', 'TopHat-Fusion', 'ICA1_PDZD9', 'ICA1', 'chr7', '8183595', '+', 'PDZD9', 'chr16', '22010436', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XR-01A', '', '110', '', 'In-Frame', 'Inter-chr', '7p21.3', '16p12.2', '', '', '', '', '', '', ''), ('16170', 'TopHat-Fusion', 'LTV1_ATG5', 'LTV1', 'chr6', '144167360', '+', 'ATG5', 'chr6', '106649963', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A248-01A', '', '208', '', 'In-Frame', 'Intra-chr', '6q24.2', '6q21', '', '', '', '', '', '', ''), ('16171', 'TopHat-Fusion', 'SUPT5H_SIPA1L3', 'SUPT5H', 'chr19', '39936604', '+', 'SIPA1L3', 'chr19', '38643479', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1RF-01A', '', '183', '', 'Out-of-Frame', 'Intra-chr', '19q13.2', '19q13.13', '', '', '', '', '', '', ''), ('16172', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677305', '+', 'IGLL5', 'chr22', '23235962', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A248-01A', '', '2294', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16173', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677320', '+', 'IGLL5', 'chr22', '23235959', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1IH-01A', '', '277', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16174', 'TopHat-Fusion', 'FBXL20_MSL1', 'FBXL20', 'chr17', '37453379', '-', 'MSL1', 'chr17', '38290531', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A1G1-01A', '', '193', '', 'In-Frame', 'Intra-chr', '17q12', '17q21.1', '', '', '', '', '', '', ''), ('16175', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A1G1-01A', '', '127', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('16176', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A06Z-01A', '', '126', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('16177', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A248-01A', '', '161', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('16178', 'TopHat-Fusion', 'PREX1_NFATC2', 'PREX1', 'chr20', '47361561', '-', 'NFATC2', 'chr20', '50114725', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A03P-01A', '', '338', '', 'Out-of-Frame', 'Intra-chr', '20q13.13', '20q13.2', '', '', '', '', '', '', ''), ('16179', 'TopHat-Fusion', 'PREX1_NFATC2', 'PREX1', 'chr20', '47361561', '-', 'NFATC2', 'chr20', '50114730', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A03P-01A', '', '338', '', 'In-Frame', 'Intra-chr', '20q13.13', '20q13.2', '', '', '', '', '', '', ''), ('16180', 'TopHat-Fusion', 'ALOX12-AS1_POLR2A', 'ALOX12-AS1', 'chr17', '6902573', '-', 'POLR2A', 'chr17', '7390847', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A1G1-01A', '', '122', '', 'Out-of-Frame', 'Intra-chr', '17p13.1', '17p13.1', '', '', '', '', '', '', ''), ('16181', 'TopHat-Fusion', 'ALOX12-AS1_POLR2A', 'ALOX12-AS1', 'chr17', '6902575', '-', 'POLR2A', 'chr17', '7388175', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A1G1-01A', '', '122', '', 'Out-of-Frame', 'Intra-chr', '17p13.1', '17p13.1', '', '', '', '', '', '', ''), ('16182', 'TopHat-Fusion', 'SYNRG_MSL1', 'SYNRG', 'chr17', '35902599', '+', 'MSL1', 'chr17', '38290531', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A1G1-01A', '', '172', '', 'Out-of-Frame', 'Intra-chr', '17q12', '17q21.1', '', '', '', '', '', '', ''), ('16183', 'TopHat-Fusion', 'SYNRG_MSL1', 'SYNRG', 'chr17', '35906802', '+', 'MSL1', 'chr17', '38290531', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A1G1-01A', '', '173', '', 'Out-of-Frame', 'Intra-chr', '17q12', '17q21.1', '', '', '', '', '', '', ''), ('16184', 'TopHat-Fusion', 'SYNRG_MSL1', 'SYNRG', 'chr17', '35910993', '+', 'MSL1', 'chr17', '38290070', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A1G1-01A', '', '173', '', 'Out-of-Frame', 'Intra-chr', '17q12', '17q21.1', '', '', '', '', '', '', ''), ('16185', 'TopHat-Fusion', 'RPRD1B_STK4', 'RPRD1B', 'chr20', '36668965', '+', 'STK4', 'chr20', '43671079', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A03P-01A', '', '193', '', 'In-Frame', 'Intra-chr', '20q11.23', '20q13.12', 'Kinase', '', '', '', 'Transcription_Factor', '', ''), ('16186', 'TopHat-Fusion', 'SYNRG_FBXL20', 'SYNRG', 'chr17', '35901327', '-', 'FBXL20', 'chr17', '37453379', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A1G1-01A', '', '442', '', 'Out-of-Frame', 'Intra-chr', '17q12', '17q12', '', '', '', '', '', '', ''), ('16187', 'TopHat-Fusion', 'SYNRG_FBXL20', 'SYNRG', 'chr17', '35906686', '-', 'FBXL20', 'chr17', '37453379', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A1G1-01A', '', '270', '', 'Out-of-Frame', 'Intra-chr', '17q12', '17q12', '', '', '', '', '', '', ''), ('16188', 'TopHat-Fusion', 'THSD4_ALDH1A2', 'THSD4', 'chr15', '71704161', '+', 'ALDH1A2', 'chr15', '58306478', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A03P-01A', '', '115', '', 'In-Frame', 'Intra-chr', '15q23', '15q21.3', '', '', '', '', '', '', ''), ('16189', 'TopHat-Fusion', 'PHF2_NR6A1', 'PHF2', 'chr9', '96398776', '+', 'NR6A1', 'chr9', '127311217', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A06Z-01A', '', '111', '', 'Out-of-Frame', 'Intra-chr', '9q22.31', '9q33.3', '', '', '', 'Receptor', 'Transcription_Factor', '', ''), ('16190', 'TopHat-Fusion', 'PPP6R3_LOC338694', 'PPP6R3', 'chr11', '68370959', '+', 'LOC338694', 'chr11', '68926913', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A06Z-01A', '', '167', '', 'Out-of-Frame', 'Intra-chr', '11q13.2', '11q13.3', '', '', '', '', '', '', ''), ('16191', 'TopHat-Fusion', 'RORA_IGF1R', 'RORA', 'chr15', '60829058', '-', 'IGF1R', 'chr15', '99473533', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A03P-01A', '', '220', '', 'Out-of-Frame', 'Intra-chr', '15q22.2', '15q26.3', 'Kinase', '', '', 'Receptor', 'Transcription_Factor', '', ''), ('16192', 'TopHat-Fusion', 'RORA_IGF1R', 'RORA', 'chr15', '60836572', '-', 'IGF1R', 'chr15', '99473533', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A03P-01A', '', '242', '', 'In-Frame', 'Intra-chr', '15q22.2', '15q26.3', 'Kinase', '', '', 'Receptor', 'Transcription_Factor', '', ''), ('16193', 'TopHat-Fusion', 'RORA_IGF1R', 'RORA', 'chr15', '60837003', '-', 'IGF1R', 'chr15', '99473533', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A03P-01A', '', '242', '', 'In-Frame', 'Intra-chr', '15q22.2', '15q26.3', 'Kinase', '', '', 'Receptor', 'Transcription_Factor', '', ''), ('16194', 'TopHat-Fusion', 'RORA_IGF1R', 'RORA', 'chr15', '60838463', '-', 'IGF1R', 'chr15', '99473533', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A03P-01A', '', '249', '', 'Out-of-Frame', 'Intra-chr', '15q22.2', '15q26.3', 'Kinase', '', '', 'Receptor', 'Transcription_Factor', '', ''), ('16195', 'TopHat-Fusion', 'RORA_IGF1R', 'RORA', 'chr15', '60839916', '-', 'IGF1R', 'chr15', '99473533', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A03P-01A', '', '246', '', 'In-Frame', 'Intra-chr', '15q22.2', '15q26.3', 'Kinase', '', '', 'Receptor', 'Transcription_Factor', '', ''), ('16196', 'TopHat-Fusion', 'RORA_IGF1R', 'RORA', 'chr15', '60847894', '-', 'IGF1R', 'chr15', '99473533', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A03P-01A', '', '117', '', 'In-Frame', 'Intra-chr', '15q22.2', '15q26.3', 'Kinase', '', '', 'Receptor', 'Transcription_Factor', '', ''), ('16197', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94035614', '+', 'COL1A1', 'chr17', '48272460', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1JU-01A', '', '123', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('16198', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94047863', '+', 'COL1A1', 'chr17', '48265961', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1JU-01A', '', '348', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('16199', 'TopHat-Fusion', 'COL1A2_COL3A1', 'COL1A2', 'chr7', '94051235', '+', 'COL3A1', 'chr2', '189867688', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1JU-01A', '', '152', '', 'In-Frame', 'Inter-chr', '7q21.3', '2q32.2', '', '', '', '', '', '', ''), ('16200', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48273303', '-', 'COL1A2', 'chr7', '94043531', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1JU-01A', '', '271', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16201', 'TopHat-Fusion', 'ARID1B_PLEKHG1', 'ARID1B', 'chr6', '157256709', '+', 'PLEKHG1', 'chr6', '151089773', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A248-01A', '', '136', '', 'In-Frame', 'Intra-chr', '6q25.3', '6q25.1', '', '', '', '', '', '', ''), ('16202', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189856953', '+', 'COL1A1', 'chr17', '48266880', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1JU-01A', '', '114', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16203', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189868187', '+', 'COL1A1', 'chr17', '48272674', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1JU-01A', '', '237', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16204', 'TopHat-Fusion', 'ICE2_GDPGP1', 'ICE2', 'chr15', '60741733', '-', 'GDPGP1', 'chr15', '90777827', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A03P-01A', '', '122', '', 'Out-of-Frame', 'Intra-chr', '15q22.2', '15q26.1', '', '', '', '', '', '', ''), ('16205', 'TopHat-Fusion', 'MSL1_YWHAEP7', 'MSL1', 'chr17', '38289361', '+', 'YWHAEP7', 'chr17', '36214847', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A1G1-01A', '', '496', '', 'Out-of-Frame', 'Intra-chr', '17q21.1', '17q12', '', '', '', '', '', '', ''), ('16206', 'TopHat-Fusion', 'GMDS-AS1_LINC00305', 'GMDS-AS1', 'chr6', '2249159', '+', 'LINC00305', 'chr18', '61778241', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A23C-01A', '', '333', '', 'Out-of-Frame', 'Inter-chr', '6p25.3', '18q22.1', '', '', '', '', '', '', ''), ('16207', 'TopHat-Fusion', 'GMDS-AS1_LINC00305', 'GMDS-AS1', 'chr6', '2249159', '+', 'LINC00305', 'chr18', '61778258', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A23C-01A', '', '333', '', 'Out-of-Frame', 'Inter-chr', '6p25.3', '18q22.1', '', '', '', '', '', '', ''), ('16208', 'TopHat-Fusion', 'CASC15_RIT2', 'CASC15', 'chr6', '22020770', '+', 'RIT2', 'chr18', '40323684', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A23C-01A', '', '665', '', 'Out-of-Frame', 'Inter-chr', '6p22.3', '18q12.3', '', '', '', '', '', '', ''), ('16209', 'TopHat-Fusion', 'ZCCHC8_RSRC2', 'ZCCHC8', 'chr12', '122983373', '-', 'RSRC2', 'chr12', '122990252', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A09M-01A', '', '225', '', 'Out-of-Frame', 'Intra-chr', '12q24.31', '12q24.31', '', '', '', '', '', '', ''), ('16210', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A6VY-01A', '', '426', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16211', 'TopHat-Fusion', 'PIEZO1_APRT', 'PIEZO1', 'chr16', '88792255', '-', 'APRT', 'chr16', '88876333', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A09M-01A', '', '244', '', 'Out-of-Frame', 'Intra-chr', '16q24.3', '16q24.3', '', '', '', '', '', '', ''), ('16212', 'TopHat-Fusion', 'PIEZO1_APRT', 'PIEZO1', 'chr16', '88792691', '-', 'APRT', 'chr16', '88876247', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A09M-01A', '', '244', '', 'Out-of-Frame', 'Intra-chr', '16q24.3', '16q24.3', '', '', '', '', '', '', ''), ('16213', 'TopHat-Fusion', 'CTTN_INPPL1', 'CTTN', 'chr11', '70279906', '+', 'INPPL1', 'chr11', '71943774', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-PE-A5DC-01A', '', '166', '', 'In-Frame', 'Intra-chr', '11q13.3', '11q13.4', '', '', '', '', '', '', ''), ('16214', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A0FX-01A', '', '113', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('16215', 'TopHat-Fusion', 'PSMB7_NPAS3', 'PSMB7', 'chr9', '127174630', '-', 'NPAS3', 'chr14', '33603100', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A1FM-01A', '', '954', '', 'Out-of-Frame', 'Inter-chr', '9q33.3', '14q13.1', '', '', '', '', '', '', ''), ('16216', 'TopHat-Fusion', 'PSMB7_NPAS3', 'PSMB7', 'chr9', '127174630', '-', 'NPAS3', 'chr14', '33619769', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A1FM-01A', '', '266', '', 'Out-of-Frame', 'Inter-chr', '9q33.3', '14q13.1', '', '', '', '', '', '', ''), ('16217', 'TopHat-Fusion', 'PSMB7_NPAS3', 'PSMB7', 'chr9', '127174630', '-', 'NPAS3', 'chr14', '33622689', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A1FM-01A', '', '264', '', 'In-Frame', 'Inter-chr', '9q33.3', '14q13.1', '', '', '', '', '', '', ''), ('16218', 'TopHat-Fusion', 'MED1_CAP2', 'MED1', 'chr17', '37595417', '-', 'CAP2', 'chr6', '17528712', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A23C-01A', '', '1449', '', 'Out-of-Frame', 'Inter-chr', '17q12', '6p22.3', '', '', '', '', '', '', ''), ('16219', 'TopHat-Fusion', 'MED1_CAP2', 'MED1', 'chr17', '37595417', '-', 'CAP2', 'chr6', '17528717', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A23C-01A', '', '1449', '', 'In-Frame', 'Inter-chr', '17q12', '6p22.3', '', '', '', '', '', '', ''), ('16220', 'TopHat-Fusion', 'BHLHE40-AS1_EDEM1', 'BHLHE40-AS1', 'chr3', '4972289', '-', 'EDEM1', 'chr3', '5255249', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A0FX-01A', '', '112', '', 'Out-of-Frame', 'Intra-chr', '3p26.1', '3p26.1', '', '', '', '', '', '', ''), ('16221', 'TopHat-Fusion', 'MTMR4_MYO1D', 'MTMR4', 'chr17', '56581104', '-', 'MYO1D', 'chr17', '30860835', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1J1-01A', '', '130', '', 'Out-of-Frame', 'Intra-chr', '17q22', '17q11.2', '', '', '', '', '', '', ''), ('16222', 'TopHat-Fusion', 'MTMR4_MYO1D', 'MTMR4', 'chr17', '56581104', '-', 'MYO1D', 'chr17', '30864100', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1J1-01A', '', '130', '', 'In-Frame', 'Intra-chr', '17q22', '17q11.2', '', '', '', '', '', '', ''), ('16223', 'TopHat-Fusion', 'HCG25_TREML1', 'HCG25', 'chr6', '33219482', '+', 'TREML1', 'chr6', '41122082', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A23C-01A', '', '204', '', '5\'UTR-5\'UTR', 'Intra-chr', '6p21.32', '6p21.1', '', '', '', '', '', '', ''), ('16224', 'TopHat-Fusion', 'HCG17_HLA-C', 'HCG17', 'chr6', '30228110', '-', 'HLA-C', 'chr6', '31239375', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A09M-01A', '', '254', '', 'Out-of-Frame', 'Intra-chr', '6p22.1', '6p21.33', '', '', '', '', '', '', ''), ('16225', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A62X-01A', '', '892', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16226', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A0FX-01A', '', '198', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16227', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677324', '+', 'IGLL5', 'chr22', '23235963', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0DT-11A', '', '146', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16228', 'TopHat-Fusion', 'PXDNL_ITFG1', 'PXDNL', 'chr8', '52688000', '-', 'ITFG1', 'chr16', '47252778', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1RE-01A', '', '118', '', 'Out-of-Frame', 'Inter-chr', '8q11.23', '16q12.1', '', '', '', '', '', '', ''), ('16229', 'TopHat-Fusion', 'PXDNL_ITFG1', 'PXDNL', 'chr8', '52701915', '-', 'ITFG1', 'chr16', '47252778', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1RE-01A', '', '415', '', 'In-Frame', 'Inter-chr', '8q11.23', '16q12.1', '', '', '', '', '', '', ''), ('16230', 'TopHat-Fusion', 'AK5_URB2', 'AK5', 'chr1', '78022371', '+', 'URB2', 'chr1', '229763505', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24Z-01A', '', '388', '', 'Out-of-Frame', 'Intra-chr', '1p31.1', '1q42.13', '', '', '', '', '', '', ''), ('16231', 'TopHat-Fusion', 'GALNT2_PGBD5', 'GALNT2', 'chr1', '230372470', '+', 'PGBD5', 'chr1', '230478849', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1II-01A', '', '197', '', 'Out-of-Frame', 'Intra-chr', '1q42.13', '1q42.13', '', '', '', '', '', '', ''), ('16232', 'TopHat-Fusion', 'GALNT2_PGBD5', 'GALNT2', 'chr1', '230372470', '+', 'PGBD5', 'chr1', '230486775', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1II-01A', '', '204', '', 'Out-of-Frame', 'Intra-chr', '1q42.13', '1q42.13', '', '', '', '', '', '', ''), ('16233', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A0J6-01A', '', '208', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('16234', 'TopHat-Fusion', 'PCYT2_ANAPC11', 'PCYT2', 'chr17', '79864339', '-', 'ANAPC11', 'chr17', '79857795', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0T1-01A', '', '122', '', 'Out-of-Frame', 'Intra-chr', '17q25.3', '17q25.3', '', '', '', '', '', '', ''), ('16235', 'TopHat-Fusion', 'PCYT2_ANAPC11', 'PCYT2', 'chr17', '79865429', '-', 'ANAPC11', 'chr17', '79857795', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0T1-01A', '', '122', '', 'Out-of-Frame', 'Intra-chr', '17q25.3', '17q25.3', '', '', '', '', '', '', ''), ('16236', 'TopHat-Fusion', 'MTAP_C9orf3', 'MTAP', 'chr9', '21838008', '+', 'C9orf3', 'chr9', '97726707', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24Z-01A', '', '103', '', 'In-Frame', 'Intra-chr', '9p21.3', '9q22.32', '', '', '', '', '', '', ''), ('16237', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A0J6-01A', '', '112', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('16238', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A0J6-01A', '', '470', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16239', 'TopHat-Fusion', 'SACS_SDK2', 'SACS', 'chr13', '23932472', '-', 'SDK2', 'chr17', '71565061', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14T-01A', '', '275', '', 'Out-of-Frame', 'Inter-chr', '13q12.12', '17q25.1', '', '', '', '', '', '', ''), ('16240', 'TopHat-Fusion', 'ACOT9_APOO', 'ACOT9', 'chrX', '23739997', '-', 'APOO', 'chrX', '23899068', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A13D-01A', '', '307', '', 'In-Frame', 'Intra-chr', 'Xp22.11', 'Xp22.11', '', '', '', '', '', '', ''), ('16241', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A8OQ-01A', '', '147', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16242', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A5QM-01A', '', '404', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16243', 'TopHat-Fusion', 'MDH1_COMMD1', 'MDH1', 'chr2', '63821719', '+', 'COMMD1', 'chr2', '62227835', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A04U-01A', '', '127', '', 'In-Frame', 'Intra-chr', '2p15', '2p15', '', '', '', '', '', '', ''), ('16244', 'TopHat-Fusion', 'LAMA5_RBBP8NL', 'LAMA5', 'chr20', '60905271', '-', 'RBBP8NL', 'chr20', '60993532', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A8OQ-01A', '', '144', '', 'Out-of-Frame', 'Intra-chr', '20q13.33', '20q13.33', '', '', '', '', '', '', ''), ('16245', 'TopHat-Fusion', 'ARID1A_YTHDF2', 'ARID1A', 'chr1', '27059282', '+', 'YTHDF2', 'chr1', '29064169', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14T-01A', '', '184', '', 'In-Frame', 'Intra-chr', '1p36.11', '1p35.3', '', '', '', '', '', '', ''), ('16246', 'TopHat-Fusion', 'COL23A1_SQSTM1', 'COL23A1', 'chr5', '177780038', '-', 'SQSTM1', 'chr5', '179251275', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A04U-01A', '', '496', '', 'In-Frame', 'Intra-chr', '5q35.3', '5q35.3', '', '', '', '', '', '', ''), ('16247', 'TopHat-Fusion', 'YWHAZ_GRHL2', 'YWHAZ', 'chr8', '101958974', '-', 'GRHL2', 'chr8', '102588437', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A8OQ-01A', '', '142', '', 'Out-of-Frame', 'Intra-chr', '8q22.3', '8q22.3', '', '', '', '', '', '', ''), ('16248', 'TopHat-Fusion', 'TTC39A_CRISP1', 'TTC39A', 'chr1', '51760062', '-', 'CRISP1', 'chr6', '49819841', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A209-01A', '', '363', '', 'In-Frame', 'Inter-chr', '1p32.3', '6p12.3', '', '', '', '', '', '', ''), ('16249', 'TopHat-Fusion', 'KIAA1324_TBX15', 'KIAA1324', 'chr1', '109743521', '+', 'TBX15', 'chr1', '119445322', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A209-01A', '', '100', '', 'In-Frame', 'Intra-chr', '1p13.3', '1p12', '', '', '', '', '', '', ''), ('16250', 'TopHat-Fusion', 'CD59_FBXO3', 'CD59', 'chr11', '33731751', '-', 'FBXO3', 'chr11', '33780146', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A13D-01A', '', '126', '', 'Out-of-Frame', 'Intra-chr', '11p13', '11p13', '', '', '', '', '', '', ''), ('16251', 'TopHat-Fusion', 'BRCA1_NMT1', 'BRCA1', 'chr17', '41244949', '-', 'NMT1', 'chr17', '43175869', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A04U-01A', '', '145', '', 'In-Frame', 'Intra-chr', '17q21.31', '17q21.31', '', '', '', '', '', '', ''), ('16252', 'TopHat-Fusion', 'MEX3D_DCTN6', 'MEX3D', 'chr19', '1567462', '-', 'DCTN6', 'chr8', '30032600', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1P4-01A', '', '112', '', 'In-Frame', 'Inter-chr', '19p13.3', '8p12', '', '', '', '', '', '', ''), ('16253', 'TopHat-Fusion', 'SMIM7_MYO9B', 'SMIM7', 'chr19', '16757906', '-', 'MYO9B', 'chr19', '17263571', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A04U-01A', '', '388', '', 'Out-of-Frame', 'Intra-chr', '19p13.11', '19p13.11', '', '', '', '', '', '', ''), ('16254', 'TopHat-Fusion', 'SMIM7_MYO9B', 'SMIM7', 'chr19', '16757930', '-', 'MYO9B', 'chr19', '17263571', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A04U-01A', '', '388', '', 'Out-of-Frame', 'Intra-chr', '19p13.11', '19p13.11', '', '', '', '', '', '', ''), ('16255', 'TopHat-Fusion', 'ELL_SMIM7', 'ELL', 'chr19', '18632730', '-', 'SMIM7', 'chr19', '16758071', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A04U-01A', '', '117', '', 'Out-of-Frame', 'Intra-chr', '19p13.11', '19p13.11', '', '', '', '', '', '', ''), ('16256', 'TopHat-Fusion', 'ELL_SMIM7', 'ELL', 'chr19', '18632730', '-', 'SMIM7', 'chr19', '16764935', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A04U-01A', '', '124', '', 'Out-of-Frame', 'Intra-chr', '19p13.11', '19p13.11', '', '', '', '', '', '', ''), ('16257', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A1G4-01A', '', '148', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('16258', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14T-01A', '', '101', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('16259', 'TopHat-Fusion', 'TBL1XR1_USP13', 'TBL1XR1', 'chr3', '176763916', '-', 'USP13', 'chr3', '179478899', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A07G-01A', '', '454', '', 'In-Frame', 'Intra-chr', '3q26.32', '3q26.33', '', '', '', '', '', '', ''), ('16260', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677320', '+', 'IGLL5', 'chr22', '23235959', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0BQ-01A', '', '137', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16261', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677322', '+', 'IGLL5', 'chr22', '23235958', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IQ-01A', '', '849', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16262', 'TopHat-Fusion', 'RPRD1A_ELP2', 'RPRD1A', 'chr18', '33643682', '-', 'ELP2', 'chr18', '33713278', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A07G-01A', '', '122', '', 'In-Frame', 'Intra-chr', '18q12.2', '18q12.2', '', '', '', '', '', '', ''), ('16263', 'TopHat-Fusion', 'MED1_ODF3L2', 'MED1', 'chr17', '37604050', '-', 'ODF3L2', 'chr19', '464363', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-LL-A5YN-01A', '', '115', '', 'Out-of-Frame', 'Inter-chr', '17q12', '19p13.3', '', '', '', '', '', '', ''), ('16264', 'TopHat-Fusion', 'MED1_ODF3L2', 'MED1', 'chr17', '37604050', '-', 'ODF3L2', 'chr19', '467545', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-LL-A5YN-01A', '', '115', '', 'Out-of-Frame', 'Inter-chr', '17q12', '19p13.3', '', '', '', '', '', '', ''), ('16265', 'TopHat-Fusion', 'RPS19_DMRTC2', 'RPS19', 'chr19', '42365280', '+', 'DMRTC2', 'chr19', '42354593', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A07G-01A', '', '213', '', 'Out-of-Frame', 'Intra-chr', '19q13.2', '19q13.2', '', '', '', '', '', '', ''), ('16266', 'TopHat-Fusion', 'AP2A1_AP2A2', 'AP2A1', 'chr19', '50298989', '+', 'AP2A2', 'chr11', '985426', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A1-A0SE-01A', '', '112', '', 'Out-of-Frame', 'Inter-chr', '19q13.33', '11p15.5', '', '', '', '', '', '', ''), ('16267', 'TopHat-Fusion', 'SEC61A2_MAPK14', 'SEC61A2', 'chr10', '12209809', '+', 'MAPK14', 'chr6', '36059929', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IQ-01A', '', '253', '', 'In-Frame', 'Inter-chr', '10p13', '6p21.31', '', '', '', '', '', '', ''), ('16268', 'TopHat-Fusion', 'HCG17_HLA-C', 'HCG17', 'chr6', '30228110', '-', 'HLA-C', 'chr6', '31239375', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0BQ-01A', '', '294', '', 'Out-of-Frame', 'Intra-chr', '6p22.1', '6p21.33', '', '', '', '', '', '', ''), ('16269', 'TopHat-Fusion', 'ATP1B1_SLC30A9', 'ATP1B1', 'chr1', '169099316', '+', 'SLC30A9', 'chr4', '42031783', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A07G-01A', '', '143', '', 'In-Frame', 'Inter-chr', '1q24.2', '4p13', '', '', '', '', '', '', ''), ('16270', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24S-01A', '', '156', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('16271', 'TopHat-Fusion', 'CLNS1A_AQP11', 'CLNS1A', 'chr11', '77336007', '-', 'AQP11', 'chr11', '77314600', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A27G-01A', '', '155', '', 'In-Frame', 'Intra-chr', '11q14.1', '11q14.1', '', '', '', '', '', '', ''), ('16272', 'TopHat-Fusion', 'WHSC1L1_ZMAT4', 'WHSC1L1', 'chr8', '38172164', '-', 'ZMAT4', 'chr8', '40389756', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1IX-01A', '', '215', '', 'Out-of-Frame', 'Intra-chr', '8p11.23', '8p11.21', '', '', '', '', '', '', ''), ('16273', 'TopHat-Fusion', 'YBX3_DGKE', 'YBX3', 'chr12', '10865931', '+', 'DGKE', 'chr17', '54920378', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A6SC-01A', '', '115', '', 'Out-of-Frame', 'Inter-chr', '12p13.2', '17q22', '', '', '', '', '', '', ''), ('16274', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48265892', '-', 'COL1A2', 'chr7', '94038658', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1IX-01A', '', '101', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16275', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48272592', '-', 'COL1A2', 'chr7', '94054428', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1IX-01A', '', '220', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16276', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48273303', '-', 'COL1A2', 'chr7', '94043531', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1IX-01A', '', '164', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16277', 'TopHat-Fusion', 'ERBB2_STXBP4', 'ERBB2', 'chr17', '37881654', '+', 'STXBP4', 'chr17', '53065831', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0DZ-11A', '', '218', '', 'In-Frame', 'Intra-chr', '17q12', '17q22', 'Kinase', '', '', '', '', '', ''), ('16278', 'TopHat-Fusion', 'ERBB2_STXBP4', 'ERBB2', 'chr17', '37881847', '+', 'STXBP4', 'chr17', '53065852', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0DZ-11A', '', '218', '', 'Out-of-Frame', 'Intra-chr', '17q12', '17q22', 'Kinase', '', '', '', '', '', ''), ('16279', 'TopHat-Fusion', 'SSFA2_SMARCE1', 'SSFA2', 'chr2', '182774697', '+', 'SMARCE1', 'chr17', '38788462', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IO-01A', '', '178', '', 'In-Frame', 'Inter-chr', '2q31.3', '17q21.2', '', '', '', '', '', '', ''), ('16280', 'TopHat-Fusion', 'DNAJB12_SLC25A16', 'DNAJB12', 'chr10', '74114522', '-', 'SLC25A16', 'chr10', '70266474', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A03V-01A', '', '101', '', 'In-Frame', 'Intra-chr', '10q22.1', '10q21.3', '', '', '', '', '', '', ''), ('16281', 'TopHat-Fusion', 'HCG17_HLA-C', 'HCG17', 'chr6', '30228110', '-', 'HLA-C', 'chr6', '31239375', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1L7-11A', '', '178', '', 'Out-of-Frame', 'Intra-chr', '6p22.1', '6p21.33', '', '', '', '', '', '', ''), ('16282', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AU-01A', '', '124', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('16283', 'TopHat-Fusion', 'ZHX1-C8orf76_LINC00536', 'ZHX1-C8orf76', 'chr8', '124266546', '-', 'LINC00536', 'chr8', '117303370', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A04Y-01A', '', '553', '', '3\'UTR-3\'UTR', 'Intra-chr', '8q24.13', '8q23.3', '', '', '', '', '', '', ''), ('16284', 'TopHat-Fusion', 'RELA_ANO1-AS2', 'RELA', 'chr11', '65425163', '-', 'ANO1-AS2', 'chr11', '69919628', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5DA-01A', '', '146', '', 'CDS-5\'UTR', 'Intra-chr', '11q13.1', '11q13.3', '', '', '', '', '', '', ''), ('16285', 'TopHat-Fusion', 'DCAF13_CASC21', 'DCAF13', 'chr8', '104427743', '+', 'CASC21', 'chr8', '128302304', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A04Y-01A', '', '271', '', 'Out-of-Frame', 'Intra-chr', '8q22.3', '8q24.21', '', '', '', '', '', '', ''), ('16286', 'TopHat-Fusion', 'DCAF13_CASC21', 'DCAF13', 'chr8', '104433309', '+', 'CASC21', 'chr8', '128302304', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A04Y-01A', '', '273', '', 'Out-of-Frame', 'Intra-chr', '8q22.3', '8q24.21', '', '', '', '', '', '', ''), ('16287', 'TopHat-Fusion', 'USP32_TBC1D16', 'USP32', 'chr17', '58378959', '-', 'TBC1D16', 'chr17', '77939518', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1OX-01A', '', '104', '', 'In-Frame', 'Intra-chr', '17q23.2', '17q25.3', '', '', '', '', '', '', ''), ('16288', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48270000', '-', 'COL1A2', 'chr7', '94052286', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24T-01A', '', '100', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16289', 'TopHat-Fusion', 'PIP4K2B_SHANK2', 'PIP4K2B', 'chr17', '36933939', '-', 'SHANK2', 'chr11', '70742671', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A2FB-01A', '', '100', '', 'In-Frame', 'Inter-chr', '17q12', '11q13.4', '', '', '', '', '', '', ''), ('16290', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A5ZX-01A', '', '173', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16291', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A06T-01A', '', '101', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16292', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0DH-01A', '', '174', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16293', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-V7-A7HQ-01A', '', '196', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16294', 'TopHat-Fusion', 'SMC5_IMMP2L', 'SMC5', 'chr9', '72882890', '+', 'IMMP2L', 'chr7', '110603620', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A124-01A', '', '367', '', 'In-Frame', 'Inter-chr', '9q21.12', '7q31.1', '', '', '', '', '', '', ''), ('16295', 'TopHat-Fusion', 'TAF2_DSCC1', 'TAF2', 'chr8', '120814033', '-', 'DSCC1', 'chr8', '120859319', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A124-01A', '', '327', '', 'In-Frame', 'Intra-chr', '8q24.12', '8q24.12', '', '', '', '', '', '', ''), ('16296', 'TopHat-Fusion', 'NPTN_CLUAP1', 'NPTN', 'chr15', '73879864', '-', 'CLUAP1', 'chr16', '3580567', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0AV-01A', '', '494', '', 'In-Frame', 'Inter-chr', '15q24.1', '16p13.3', '', '', '', '', '', '', ''), ('16297', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A2LO-01A', '', '138', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16298', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-S3-AA0Z-01A', '', '161', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16299', 'TopHat-Fusion', 'MYO5B_ELAC1', 'MYO5B', 'chr18', '47455881', '-', 'ELAC1', 'chr18', '48500880', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A124-01A', '', '227', '', 'Out-of-Frame', 'Intra-chr', '18q21.1', '18q21.2', '', '', '', '', '', '', ''), ('16300', 'TopHat-Fusion', 'PPP2R4_FAM73B', 'PPP2R4', 'chr9', '131902623', '+', 'FAM73B', 'chr9', '131830766', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5D6-01A', '', '114', '', 'Out-of-Frame', 'Intra-chr', '9q34.11', '9q34.11', '', '', '', '', '', '', ''), ('16301', 'TopHat-Fusion', 'SNAI1_SLC9A8', 'SNAI1', 'chr20', '48599677', '+', 'SLC9A8', 'chr20', '48479465', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5D6-01A', '', '129', '', 'Out-of-Frame', 'Intra-chr', '20q13.13', '20q13.13', '', '', '', '', '', '', ''), ('16302', 'TopHat-Fusion', 'SLF1_ZMYM2', 'SLF1', 'chr5', '93977098', '+', 'ZMYM2', 'chr13', '20641529', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A3OD-01A', '', '115', '', 'Out-of-Frame', 'Inter-chr', '5q15', '13q12.11', '', '', '', '', '', '', ''), ('16303', 'TopHat-Fusion', 'MS4A6E_MS4A6A', 'MS4A6E', 'chr11', '60102514', '+', 'MS4A6A', 'chr11', '59947437', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1RB-11A', '', '200', '', 'In-Frame', 'Intra-chr', '11q12.2', '11q12.2', '', '', '', '', '', '', ''), ('16304', 'TopHat-Fusion', 'NOMO3_TFAP4', 'NOMO3', 'chr16', '16350014', '+', 'TFAP4', 'chr16', '4312701', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-S3-AA0Z-01A', '', '154', '', 'In-Frame', 'Intra-chr', '16p13.11', '16p13.3', '', '', '', '', '', '', ''), ('16305', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A124-01A', '', '642', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16306', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0E7-01A', '', '108', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16307', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A28O-01A', '', '491', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16308', 'TopHat-Fusion', 'SEC61A2_MAPK14', 'SEC61A2', 'chr10', '12209809', '+', 'MAPK14', 'chr6', '36059929', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A124-01A', '', '122', '', 'In-Frame', 'Inter-chr', '10p13', '6p21.31', '', '', '', '', '', '', ''), ('16309', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677320', '+', 'IGLL5', 'chr22', '23235959', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1B6-01A', '', '2209', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16310', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677323', '+', 'IGLL5', 'chr22', '23235962', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A3HN-01A', '', '229', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16311', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677323', '+', 'IGLL5', 'chr22', '23235962', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A0J5-01A', '', '153', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16312', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189856953', '+', 'COL1A1', 'chr17', '48266880', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A0J5-01A', '', '102', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16313', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189868187', '+', 'COL1A1', 'chr17', '48272674', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A0J5-01A', '', '180', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16314', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189868187', '+', 'COL1A1', 'chr17', '48272674', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XB-01A', '', '116', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16315', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189871706', '+', 'COL1A1', 'chr17', '48264482', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A0J5-01A', '', '148', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16316', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189873946', '+', 'COL1A1', 'chr17', '48263867', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A0J5-01A', '', '134', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16317', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48265892', '-', 'COL1A2', 'chr7', '94038658', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XB-01A', '', '137', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16318', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48270000', '-', 'COL1A2', 'chr7', '94052286', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A0J5-01A', '', '348', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16319', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48273303', '-', 'COL1A2', 'chr7', '94043531', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A0J5-01A', '', '218', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', '');
INSERT INTO `ChimerSeq_dump` VALUES ('16320', 'TopHat-Fusion', 'WFDC2_PI3', 'WFDC2', 'chr20', '44099171', '+', 'PI3', 'chr20', '43804501', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AQ-A54N-01A', '', '294', '', 'In-Frame', 'Intra-chr', '20q13.12', '20q13.12', '', '', '', '', '', '', ''), ('16321', 'TopHat-Fusion', 'TFG_ADGRG7', 'TFG', 'chr3', '100438901', '+', 'ADGRG7', 'chr3', '100348441', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XB-01A', '', '106', '', 'Out-of-Frame', 'Intra-chr', '3q12.2', '3q12.2', '', '', '', '', '', '', ''), ('16322', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94035614', '+', 'COL1A1', 'chr17', '48272460', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A0J5-01A', '', '112', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('16323', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94035614', '+', 'COL1A1', 'chr17', '48272460', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XB-01A', '', '100', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('16324', 'TopHat-Fusion', 'CASC21_CASC8', 'CASC21', 'chr8', '128302304', '+', 'CASC8', 'chr8', '128433073', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1B6-01A', '', '1070', '', 'Out-of-Frame', 'Intra-chr', '8q24.21', '8q24.21', '', '', '', '', '', '', ''), ('16325', 'TopHat-Fusion', 'COL1A1_COL3A1', 'COL1A1', 'chr17', '48269148', '-', 'COL3A1', 'chr2', '189863408', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A0J5-01A', '', '204', '', 'In-Frame', 'Inter-chr', '17q21.33', '2q32.2', '', '', '', '', '', '', ''), ('16326', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A0J5-01A', '', '133', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('16327', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XM-01A', '', '103', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('16328', 'TopHat-Fusion', 'SAFB2_SAFB', 'SAFB2', 'chr19', '5610005', '-', 'SAFB', 'chr19', '5653125', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A3X8-01A', '', '104', '', 'In-Frame', 'Intra-chr', '19p13.3', '19p13.3', '', '', '', '', '', '', ''), ('16329', 'TopHat-Fusion', 'NFIB_HEATR5B', 'NFIB', 'chr9', '14313480', '-', 'HEATR5B', 'chr2', '37208936', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A1-A0SB-01A', '', '244', '', 'Out-of-Frame', 'Inter-chr', '9p22.3', '2p22.2', '', '', '', '', '', '', ''), ('16330', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A1-A0SD-01A', '', '139', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16331', 'TopHat-Fusion', 'WAC_LRRC37A6P', 'WAC', 'chr10', '28824685', '+', 'LRRC37A6P', 'chr10', '27535625', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A0U4-01A', '', '176', '', 'CDS-3\'UTR', 'Intra-chr', '10p12.1', '10p12.1', '', '', '', '', '', '', ''), ('16332', 'TopHat-Fusion', 'THBS1_FSIP1', 'THBS1', 'chr15', '39886406', '-', 'FSIP1', 'chr15', '39893097', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A08O-01A', '', '128', '', 'Out-of-Frame', 'Intra-chr', '15q14', '15q14', '', '', '', '', '', '', ''), ('16333', 'TopHat-Fusion', 'YARS_ADM5', 'YARS', 'chr1', '33246635', '-', 'ADM5', 'chr19', '50192782', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B9-01A', '', '106', '', 'Out-of-Frame', 'Inter-chr', '1p35.1', '19q13.33', '', '', '', '', '', '', ''), ('16334', 'TopHat-Fusion', 'YARS_ADM5', 'YARS', 'chr1', '33246648', '-', 'ADM5', 'chr19', '50192944', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B9-01A', '', '106', '', 'Out-of-Frame', 'Inter-chr', '1p35.1', '19q13.33', '', '', '', '', '', '', ''), ('16335', 'TopHat-Fusion', 'YARS_ADM5', 'YARS', 'chr1', '33246648', '-', 'ADM5', 'chr19', '50193146', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B9-01A', '', '106', '', 'Out-of-Frame', 'Inter-chr', '1p35.1', '19q13.33', '', '', '', '', '', '', ''), ('16336', 'TopHat-Fusion', 'YARS_ADM5', 'YARS', 'chr1', '33246648', '-', 'ADM5', 'chr19', '50193362', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B9-01A', '', '106', '', 'Out-of-Frame', 'Inter-chr', '1p35.1', '19q13.33', '', '', '', '', '', '', ''), ('16337', 'TopHat-Fusion', 'GSTM2_GSTM2P1', 'GSTM2', 'chr1', '110213939', '+', 'GSTM2P1', 'chr6', '111368373', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A1FN-11A', '', '132', '', 'Out-of-Frame', 'Inter-chr', '1p13.3', '6q21', '', '', '', '', '', '', ''), ('16338', 'TopHat-Fusion', 'PILRA_PILRB', 'PILRA', 'chr7', '99972055', '+', 'PILRB', 'chr7', '99964715', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A12D-01A', '', '220', '', 'In-Frame', 'Intra-chr', '7q22.1', '7q22.1', '', '', '', '', '', '', ''), ('16339', 'TopHat-Fusion', 'HCG17_HLA-C', 'HCG17', 'chr6', '30228110', '-', 'HLA-C', 'chr6', '31239375', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15I-01A', '', '164', '', 'Out-of-Frame', 'Intra-chr', '6p22.1', '6p21.33', '', '', '', '', '', '', ''), ('16340', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1JH-01A', '', '113', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('16341', 'TopHat-Fusion', 'SAFB2_SAFB', 'SAFB2', 'chr19', '5610005', '-', 'SAFB', 'chr19', '5653125', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0AZ-01A', '', '418', '', 'In-Frame', 'Intra-chr', '19p13.3', '19p13.3', '', '', '', '', '', '', ''), ('16342', 'TopHat-Fusion', 'ALDH3B2_ALDH3B1', 'ALDH3B2', 'chr11', '67434044', '-', 'ALDH3B1', 'chr11', '67786638', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A1-A0SD-01A', '', '395', '', 'Out-of-Frame', 'Intra-chr', '11q13.2', '11q13.2', '', '', '', '', '', '', ''), ('16343', 'TopHat-Fusion', 'ALDH3B2_ALDH3B1', 'ALDH3B2', 'chr11', '67434044', '-', 'ALDH3B1', 'chr11', '67786638', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1JH-01A', '', '1046', '', 'Out-of-Frame', 'Intra-chr', '11q13.2', '11q13.2', '', '', '', '', '', '', ''), ('16344', 'TopHat-Fusion', 'GMCL1P1_GMCL1', 'GMCL1P1', 'chr5', '177612925', '-', 'GMCL1', 'chr2', '70096853', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A08O-01A', '', '125', '', '3\'UTR-CDS', 'Inter-chr', '5q35.3', '2p13.3', '', '', '', '', '', '', ''), ('16345', 'TopHat-Fusion', 'WHSC1L1_ANK1', 'WHSC1L1', 'chr8', '38205014', '-', 'ANK1', 'chr8', '41615654', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15A-01A', '', '232', '', 'In-Frame', 'Intra-chr', '8p11.23', '8p11.21', '', '', '', '', '', '', ''), ('16346', 'TopHat-Fusion', 'KAT6A_ADAM2', 'KAT6A', 'chr8', '41905895', '-', 'ADAM2', 'chr8', '39624769', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15A-01A', '', '246', '', 'In-Frame', 'Intra-chr', '8p11.21', '8p11.22', '', '', '', '', 'Transcription_Factor', '', ''), ('16347', 'TopHat-Fusion', 'KAT6A_ADAM2', 'KAT6A', 'chr8', '41905895', '-', 'ADAM2', 'chr8', '39627093', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15A-01A', '', '246', '', 'Out-of-Frame', 'Intra-chr', '8p11.21', '8p11.22', '', '', '', '', 'Transcription_Factor', '', ''), ('16348', 'TopHat-Fusion', 'LMCD1-AS1_THRB', 'LMCD1-AS1', 'chr3', '8517249', '-', 'THRB', 'chr3', '24184991', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0CW-01A', '', '260', '', 'Out-of-Frame', 'Intra-chr', '3p26.1', '3p24.2', '', '', '', '', '', '', ''), ('16349', 'TopHat-Fusion', 'LMCD1-AS1_THRB', 'LMCD1-AS1', 'chr3', '8521888', '-', 'THRB', 'chr3', '24184991', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0CW-01A', '', '259', '', 'Out-of-Frame', 'Intra-chr', '3p26.1', '3p24.2', '', '', '', '', '', '', ''), ('16350', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94047863', '+', 'COL1A1', 'chr17', '48265961', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0DI-01A', '', '146', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('16351', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94053754', '+', 'COL1A1', 'chr17', '48272460', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0DI-01A', '', '130', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('16352', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189868187', '+', 'COL1A1', 'chr17', '48272674', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0DI-01A', '', '111', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16353', 'TopHat-Fusion', 'TIAM1_DOPEY2', 'TIAM1', 'chr21', '32617801', '-', 'DOPEY2', 'chr21', '37565715', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0CW-01A', '', '212', '', 'Out-of-Frame', 'Intra-chr', '21q22.11', '21q22.12', '', '', '', '', '', '', ''), ('16354', 'TopHat-Fusion', 'SNHG17_BCAS1', 'SNHG17', 'chr20', '37055061', '-', 'BCAS1', 'chr20', '52612588', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A03M-01B', '', '106', '', 'Out-of-Frame', 'Intra-chr', '20q11.23', '20q13.2', '', '', '', '', '', '', ''), ('16355', 'TopHat-Fusion', 'LINC01605_KAT6A', 'LINC01605', 'chr8', '37337606', '-', 'KAT6A', 'chr8', '41905895', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15A-01A', '', '131', '', 'Out-of-Frame', 'Intra-chr', '8p11.23', '8p11.21', '', '', '', '', '', '', ''), ('16356', 'TopHat-Fusion', 'LINC01605_KAT6A', 'LINC01605', 'chr8', '37345950', '-', 'KAT6A', 'chr8', '41905895', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15A-01A', '', '132', '', 'Out-of-Frame', 'Intra-chr', '8p11.23', '8p11.21', '', '', '', '', '', '', ''), ('16357', 'TopHat-Fusion', 'RBL1_CTNNBL1', 'RBL1', 'chr20', '35717391', '-', 'CTNNBL1', 'chr20', '36500326', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A03M-01B', '', '108', '', 'Out-of-Frame', 'Intra-chr', '20q11.23', '20q11.23', '', '', '', '', '', '', ''), ('16358', 'TopHat-Fusion', 'DNAJC1_LOC100507377', 'DNAJC1', 'chr10', '22193450', '-', 'LOC100507377', 'chr12', '74668732', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A107-01A', '', '100', '', 'CDS-3\'UTR', 'Inter-chr', '10p12.31', '12q21.1', '', '', '', '', '', '', ''), ('16359', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0CW-01A', '', '117', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('16360', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15A-01A', '', '106', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('16361', 'TopHat-Fusion', 'TCF7L1_WIF1', 'TCF7L1', 'chr2', '85361572', '+', 'WIF1', 'chr12', '65471633', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1LI-01A', '', '156', '', 'In-Frame', 'Inter-chr', '2p11.2', '12q14.3', '', '', '', '', '', '', ''), ('16362', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677323', '+', 'IGLL5', 'chr22', '23235962', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AQ-01A', '', '547', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16363', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A06N-01A', '', '149', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('16364', 'TopHat-Fusion', 'TFG_ADGRG7', 'TFG', 'chr3', '100438901', '+', 'ADGRG7', 'chr3', '100348441', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A228-01A', '', '150', '', 'Out-of-Frame', 'Intra-chr', '3q12.2', '3q12.2', '', '', '', '', '', '', ''), ('16365', 'TopHat-Fusion', 'KCNQ1_NAP1L4', 'KCNQ1', 'chr11', '2861671', '+', 'NAP1L4', 'chr11', '2997253', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A228-01A', '', '146', '', '', 'Intra-chr', '11p15.4', '11p15.4', '', '', '', '', '', '', ''), ('16366', 'TopHat-Fusion', 'ANO1_TENM4', 'ANO1', 'chr11', '69962604', '+', 'TENM4', 'chr11', '78972748', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A228-01A', '', '106', '', 'Out-of-Frame', 'Intra-chr', '11q13.3', '11q14.1', '', '', '', '', '', '', ''), ('16367', 'TopHat-Fusion', 'PGAP1_SPAG16', 'PGAP1', 'chr2', '197781140', '-', 'SPAG16', 'chr2', '215198510', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A228-01A', '', '138', '', 'Out-of-Frame', 'Intra-chr', '2q33.1', '2q34', '', '', '', '', '', '', ''), ('16368', 'TopHat-Fusion', 'PGAP1_SPAG16', 'PGAP1', 'chr2', '197781141', '-', 'SPAG16', 'chr2', '215195227', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A228-01A', '', '138', '', 'In-Frame', 'Intra-chr', '2q33.1', '2q34', '', '', '', '', '', '', ''), ('16369', 'TopHat-Fusion', 'PGAP1_SPAG16', 'PGAP1', 'chr2', '197781141', '-', 'SPAG16', 'chr2', '215197614', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A228-01A', '', '138', '', 'Out-of-Frame', 'Intra-chr', '2q33.1', '2q34', '', '', '', '', '', '', ''), ('16370', 'TopHat-Fusion', 'PGAP1_SPAG16', 'PGAP1', 'chr2', '197781141', '-', 'SPAG16', 'chr2', '215198510', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A228-01A', '', '138', '', 'Out-of-Frame', 'Intra-chr', '2q33.1', '2q34', '', '', '', '', '', '', ''), ('16371', 'TopHat-Fusion', 'SSH2_LOC101927166', 'SSH2', 'chr17', '28029976', '-', 'LOC101927166', 'chr17', '46542808', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A275-01A', '', '229', '', 'Out-of-Frame', 'Intra-chr', '17q11.2', '17q21.32', '', '', '', '', '', '', ''), ('16372', 'TopHat-Fusion', 'SOGA1_ARHGAP40', 'SOGA1', 'chr20', '35421651', '-', 'ARHGAP40', 'chr20', '37277493', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A2FW-01A', '', '243', '', 'In-Frame', 'Intra-chr', '20q11.23', '20q11.23', '', '', '', '', '', '', ''), ('16373', 'TopHat-Fusion', 'SOGA1_ARHGAP40', 'SOGA1', 'chr20', '35421651', '-', 'ARHGAP40', 'chr20', '37277496', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A2FW-01A', '', '243', '', 'In-Frame', 'Intra-chr', '20q11.23', '20q11.23', '', '', '', '', '', '', ''), ('16374', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235963', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A2LQ-01A', '', '256', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16375', 'TopHat-Fusion', 'KCNU1_PLEKHA2', 'KCNU1', 'chr8', '36642078', '+', 'PLEKHA2', 'chr8', '38801354', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0EI-01A', '', '138', '', 'In-Frame', 'Intra-chr', '8p11.23', '8p11.22', '', '', '', '', '', '', ''), ('16376', 'TopHat-Fusion', 'NFS1_PTPN1', 'NFS1', 'chr20', '34283104', '-', 'PTPN1', 'chr20', '49191190', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A2FW-01A', '', '157', '', 'Out-of-Frame', 'Intra-chr', '20q11.22', '20q13.13', '', '', '', '', '', '', ''), ('16377', 'TopHat-Fusion', 'NFS1_PTPN1', 'NFS1', 'chr20', '34285949', '-', 'PTPN1', 'chr20', '49191190', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A2FW-01A', '', '150', '', 'In-Frame', 'Intra-chr', '20q11.22', '20q13.13', '', '', '', '', '', '', ''), ('16378', 'TopHat-Fusion', 'KCNB1_ADNP', 'KCNB1', 'chr20', '47990840', '-', 'ADNP', 'chr20', '49518553', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A2FW-01A', '', '517', '', 'Out-of-Frame', 'Intra-chr', '20q13.13', '20q13.13', '', '', '', '', '', '', ''), ('16379', 'TopHat-Fusion', 'ANK3_WIPF2', 'ANK3', 'chr10', '61853588', '-', 'WIPF2', 'chr17', '38429886', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1OZ-01A', '', '141', '', 'In-Frame', 'Inter-chr', '10q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16380', 'TopHat-Fusion', 'ARHGAP35_COL22A1', 'ARHGAP35', 'chr19', '47440664', '+', 'COL22A1', 'chr8', '139793222', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XZ-01A', '', '104', '', 'Out-of-Frame', 'Inter-chr', '19q13.32', '8q24.23', '', '', '', '', '', '', ''), ('16381', 'TopHat-Fusion', 'SRGAP1_GAB2', 'SRGAP1', 'chr12', '64480805', '+', 'GAB2', 'chr11', '77991946', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A0A9-01A', '', '102', '', 'Out-of-Frame', 'Inter-chr', '12q14.2', '11q14.1', '', '', '', '', '', '', ''), ('16382', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94035614', '+', 'COL1A1', 'chr17', '48272125', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A2LQ-01A', '', '100', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('16383', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94047863', '+', 'COL1A1', 'chr17', '48265961', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A2LQ-01A', '', '244', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('16384', 'TopHat-Fusion', 'PI4KB_SELENBP1', 'PI4KB', 'chr1', '151297220', '-', 'SELENBP1', 'chr1', '151342244', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A07C-01A', '', '102', '', 'In-Frame', 'Intra-chr', '1q21.3', '1q21.3', '', '', '', '', '', '', ''), ('16385', 'TopHat-Fusion', 'PI4KB_SELENBP1', 'PI4KB', 'chr1', '151298647', '-', 'SELENBP1', 'chr1', '151342244', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A07C-01A', '', '102', '', 'In-Frame', 'Intra-chr', '1q21.3', '1q21.3', '', '', '', '', '', '', ''), ('16386', 'TopHat-Fusion', 'RAB11FIP1_HTRA4', 'RAB11FIP1', 'chr8', '37727937', '-', 'HTRA4', 'chr8', '38836733', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0EI-01A', '', '138', '', 'In-Frame', 'Intra-chr', '8p11.23', '8p11.22', '', '', '', '', '', '', ''), ('16387', 'TopHat-Fusion', 'RAB11FIP1_HTRA4', 'RAB11FIP1', 'chr8', '37727937', '-', 'HTRA4', 'chr8', '38839171', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0EI-01A', '', '138', '', 'In-Frame', 'Intra-chr', '8p11.23', '8p11.22', '', '', '', '', '', '', ''), ('16388', 'TopHat-Fusion', 'APP_LOC101927973', 'APP', 'chr21', '27277335', '-', 'LOC101927973', 'chr21', '29549550', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A275-01A', '', '201', '', 'Out-of-Frame', 'Intra-chr', '21q21.3', '21q21.3', '', '', '', '', '', '', ''), ('16389', 'TopHat-Fusion', 'APP_LOC101927973', 'APP', 'chr21', '27277335', '-', 'LOC101927973', 'chr21', '29563903', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A275-01A', '', '279', '', 'Out-of-Frame', 'Intra-chr', '21q21.3', '21q21.3', '', '', '', '', '', '', ''), ('16390', 'TopHat-Fusion', 'NARS2_SERINC3', 'NARS2', 'chr11', '78154693', '-', 'SERINC3', 'chr20', '43150553', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A2FW-01A', '', '1087', '', '', 'Inter-chr', '11q14.1', '20q13.12', '', '', '', '', '', '', ''), ('16391', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48270000', '-', 'COL1A2', 'chr7', '94052286', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A2LQ-01A', '', '324', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16392', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48273303', '-', 'COL1A2', 'chr7', '94043531', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A2LQ-01A', '', '208', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16393', 'TopHat-Fusion', 'KIRREL3_GLB1L2', 'KIRREL3', 'chr11', '126851965', '-', 'GLB1L2', 'chr11', '134241721', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A2FW-01A', '', '137', '', 'In-Frame', 'Intra-chr', '11q24.2', '11q25', '', '', '', '', '', '', ''), ('16394', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189861943', '+', 'COL1A1', 'chr17', '48275118', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A2LQ-01A', '', '130', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16395', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189868187', '+', 'COL1A1', 'chr17', '48272674', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A2LQ-01A', '', '173', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16396', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189871715', '+', 'COL1A1', 'chr17', '48264897', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A2LQ-01A', '', '142', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16397', 'TopHat-Fusion', 'ZNF460_ELSPBP1', 'ZNF460', 'chr19', '57796044', '+', 'ELSPBP1', 'chr19', '48517427', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0EV-01A', '', '208', '', 'In-Frame', 'Intra-chr', '19q13.43', '19q13.33', '', '', '', '', '', '', ''), ('16398', 'TopHat-Fusion', 'ZNF460_ELSPBP1', 'ZNF460', 'chr19', '57796044', '+', 'ELSPBP1', 'chr19', '48519149', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0EV-01A', '', '213', '', 'In-Frame', 'Intra-chr', '19q13.43', '19q13.33', '', '', '', '', '', '', ''), ('16399', 'TopHat-Fusion', 'ZNF460_ELSPBP1', 'ZNF460', 'chr19', '57796044', '+', 'ELSPBP1', 'chr19', '48522975', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0EV-01A', '', '213', '', 'In-Frame', 'Intra-chr', '19q13.43', '19q13.33', '', '', '', '', '', '', ''), ('16400', 'TopHat-Fusion', 'ZNF460_ELSPBP1', 'ZNF460', 'chr19', '57796044', '+', 'ELSPBP1', 'chr19', '48525426', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0EV-01A', '', '213', '', 'In-Frame', 'Intra-chr', '19q13.43', '19q13.33', '', '', '', '', '', '', ''), ('16401', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A26F-01A', '', '1111', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16402', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AJ-01A', '', '331', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16403', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-LL-A5YO-01A', '', '1715', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16404', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A26F-01A', '', '133', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('16405', 'TopHat-Fusion', 'SKIV2L2_CETN3', 'SKIV2L2', 'chr5', '54662702', '+', 'CETN3', 'chr5', '89689923', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A27A-01A', '', '100', '', 'In-Frame', 'Intra-chr', '5q11.2', '5q14.3', '', '', '', '', '', '', ''), ('16406', 'TopHat-Fusion', 'SERINC5_LOC102467147', 'SERINC5', 'chr5', '79454658', '-', 'LOC102467147', 'chr5', '55753769', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A27A-01A', '', '147', '', 'Out-of-Frame', 'Intra-chr', '5q14.1', '5q11.2', '', '', '', '', '', '', ''), ('16407', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48270000', '-', 'COL1A2', 'chr7', '94052286', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A26F-01A', '', '141', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16408', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48271738', '-', 'COL1A2', 'chr7', '94054919', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A26F-01A', '', '130', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16409', 'TopHat-Fusion', 'ANO1_PLXDC1', 'ANO1', 'chr11', '69924819', '+', 'PLXDC1', 'chr17', '37228719', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A3QQ-01A', '', '103', '', 'Out-of-Frame', 'Inter-chr', '11q13.3', '17q12', '', '', '', '', '', '', ''), ('16410', 'TopHat-Fusion', 'ANO1_PLXDC1', 'ANO1', 'chr11', '69926717', '+', 'PLXDC1', 'chr17', '37224199', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A3QQ-01A', '', '103', '', 'In-Frame', 'Inter-chr', '11q13.3', '17q12', '', '', '', '', '', '', ''), ('16411', 'TopHat-Fusion', 'RMDN1_PDXDC1', 'RMDN1', 'chr8', '87494745', '+', 'PDXDC1', 'chr16', '15134937', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A3QQ-01A', '', '100', '', 'Out-of-Frame', 'Inter-chr', '8q21.3', '16p13.11', '', '', '', '', '', '', ''), ('16412', 'TopHat-Fusion', 'GMDS_LAMA1', 'GMDS', 'chr6', '2116004', '-', 'LAMA1', 'chr18', '7076816', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0HB-01A', '', '407', '', 'In-Frame', 'Inter-chr', '6p25.3', '18p11.31', '', '', '', '', '', '', ''), ('16413', 'TopHat-Fusion', 'GMDS_LAMA1', 'GMDS', 'chr6', '2116004', '-', 'LAMA1', 'chr18', '7079318', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0HB-01A', '', '402', '', 'In-Frame', 'Inter-chr', '6p25.3', '18p11.31', '', '', '', '', '', '', ''), ('16414', 'TopHat-Fusion', 'RHOC_RNF213', 'RHOC', 'chr1', '113244605', '-', 'RNF213', 'chr17', '78314104', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A3XZ-01A', '', '778', '', 'Out-of-Frame', 'Inter-chr', '1p13.2', '17q25.3', '', '', '', '', '', '', ''), ('16415', 'TopHat-Fusion', 'PCAT18_KCTD1', 'PCAT18', 'chr18', '24283355', '-', 'KCTD1', 'chr18', '24081213', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A3Q9-01A', '', '118', '', 'Out-of-Frame', 'Intra-chr', '18q11.2', '18q11.2', '', '', '', '', '', '', ''), ('16416', 'TopHat-Fusion', 'UTP18_BRIP1', 'UTP18', 'chr17', '49346264', '+', 'BRIP1', 'chr17', '59821541', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0HB-01A', '', '188', '', 'Out-of-Frame', 'Intra-chr', '17q21.33', '17q23.2', '', '', '', '', '', '', ''), ('16417', 'TopHat-Fusion', 'UTP18_BRIP1', 'UTP18', 'chr17', '49346264', '+', 'BRIP1', 'chr17', '59885842', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0HB-01A', '', '106', '', 'Out-of-Frame', 'Intra-chr', '17q21.33', '17q23.2', '', '', '', '', '', '', ''), ('16418', 'TopHat-Fusion', 'PILRA_PILRB', 'PILRA', 'chr7', '99972055', '+', 'PILRB', 'chr7', '99964715', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A13H-01A', '', '573', '', 'In-Frame', 'Intra-chr', '7q22.1', '7q22.1', '', '', '', '', '', '', ''), ('16419', 'TopHat-Fusion', 'PILRA_PILRB', 'PILRA', 'chr7', '99972055', '+', 'PILRB', 'chr7', '99964715', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1X8-01A', '', '135', '', 'In-Frame', 'Intra-chr', '7q22.1', '7q22.1', '', '', '', '', '', '', ''), ('16420', 'TopHat-Fusion', 'SVIL-AS1_SVILP1', 'SVIL-AS1', 'chr10', '29752420', '-', 'SVILP1', 'chr10', '31001486', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0BA-11A', '', '189', '', 'Out-of-Frame', 'Intra-chr', '10p11.23', '10p11.23', '', '', '', '', '', '', ''), ('16421', 'TopHat-Fusion', 'SVIL-AS1_SVILP1', 'SVIL-AS1', 'chr10', '29752420', '-', 'SVILP1', 'chr10', '31001486', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0DP-11A', '', '275', '', 'Out-of-Frame', 'Intra-chr', '10p11.23', '10p11.23', '', '', '', '', '', '', ''), ('16422', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0HB-01A', '', '301', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16423', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0HA-01A', '', '117', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16424', 'TopHat-Fusion', 'ANO6_IAPP', 'ANO6', 'chr12', '45816844', '+', 'IAPP', 'chr12', '21531170', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1L8-01A', '', '188', '', 'Out-of-Frame', 'Intra-chr', '12q12', '12p12.1', '', '', '', '', '', '', ''), ('16425', 'TopHat-Fusion', 'ACOT9_APOO', 'ACOT9', 'chrX', '23739997', '-', 'APOO', 'chrX', '23899068', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A13D-01A', '', '611', '', 'In-Frame', 'Intra-chr', 'Xp22.11', 'Xp22.11', '', '', '', '', '', '', ''), ('16426', 'TopHat-Fusion', 'CLDN9_HCFC1R1', 'CLDN9', 'chr16', '3063974', '-', 'HCFC1R1', 'chr16', '3072918', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A13D-01A', '', '391', '', 'Out-of-Frame', 'Intra-chr', '16p13.3', '16p13.3', '', '', '', '', '', '', ''), ('16427', 'TopHat-Fusion', 'KCNU1_CYP7B1', 'KCNU1', 'chr8', '36704930', '-', 'CYP7B1', 'chr8', '65571309', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0EX-01A', '', '185', '', 'Out-of-Frame', 'Intra-chr', '8p11.23', '8q12.3', '', '', '', '', '', '', ''), ('16428', 'TopHat-Fusion', 'TEAD2_PTOV1-AS1', 'TEAD2', 'chr19', '49844602', '-', 'PTOV1-AS1', 'chr19', '50351365', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A13D-01A', '', '221', '', 'CDS-5\'UTR', 'Intra-chr', '19q13.33', '19q13.33', '', '', '', '', '', '', ''), ('16429', 'TopHat-Fusion', 'APP_RCAN1', 'APP', 'chr21', '27484295', '-', 'RCAN1', 'chr21', '35896007', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A08P-01A', '', '119', '', 'In-Frame', 'Intra-chr', '21q21.3', '21q22.12', '', '', '', '', '', '', ''), ('16430', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0EX-01A', '', '131', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('16431', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48273303', '-', 'COL1A2', 'chr7', '94043531', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A09R-01A', '', '139', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16432', 'TopHat-Fusion', 'CD59_FBXO3', 'CD59', 'chr11', '33731751', '-', 'FBXO3', 'chr11', '33780146', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A13D-01A', '', '144', '', 'Out-of-Frame', 'Intra-chr', '11p13', '11p13', '', '', '', '', '', '', ''), ('16433', 'TopHat-Fusion', 'HEATR5A_NPAS3', 'HEATR5A', 'chr14', '31784975', '-', 'NPAS3', 'chr14', '33484228', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A06R-01A', '', '112', '', 'Out-of-Frame', 'Intra-chr', '14q12', '14q13.1', '', '', '', '', '', '', ''), ('16434', 'TopHat-Fusion', 'HEATR5A_NPAS3', 'HEATR5A', 'chr14', '31784975', '-', 'NPAS3', 'chr14', '33489607', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A06R-01A', '', '112', '', 'Out-of-Frame', 'Intra-chr', '14q12', '14q13.1', '', '', '', '', '', '', ''), ('16435', 'TopHat-Fusion', 'KCNU1_ERLIN2', 'KCNU1', 'chr8', '36705089', '+', 'ERLIN2', 'chr8', '37603530', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0EX-01A', '', '156', '', 'Out-of-Frame', 'Intra-chr', '8p11.23', '8p11.23', '', '', '', '', '', '', ''), ('16436', 'TopHat-Fusion', 'ZNF252P_TMED10', 'ZNF252P', 'chr8', '146220626', '+', 'TMED10', 'chr14', '75618828', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A06R-01A', '', '197', '', '3\'UTR-CDS', 'Inter-chr', '8q24.3', '14q24.3', '', '', '', '', '', '', ''), ('16437', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A09Z-01A', '', '134', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('16438', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A03R-01A', '', '109', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16439', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B3-11B', '', '112', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16440', 'TopHat-Fusion', 'KTN1_NADSYN1', 'KTN1', 'chr14', '56114806', '+', 'NADSYN1', 'chr11', '71180186', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0D4-01A', '', '283', '', '', 'Inter-chr', '14q22.3', '11q13.4', '', '', '', '', '', '', ''), ('16441', 'TopHat-Fusion', 'GATA3_TAF3', 'GATA3', 'chr10', '8111560', '+', 'TAF3', 'chr10', '8055693', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AP-01A', '', '597', '', 'In-Frame', 'Intra-chr', '10p14', '10p14', '', '', '', '', 'Transcription_Factor', '', ''), ('16442', 'TopHat-Fusion', 'DNAJC9-AS1_CFAP70', 'DNAJC9-AS1', 'chr10', '75010572', '-', 'CFAP70', 'chr10', '75016173', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A07W-01A', '', '176', '', 'Out-of-Frame', 'Intra-chr', '10q22.2', '10q22.2', '', '', '', '', '', '', ''), ('16443', 'TopHat-Fusion', 'DNAJC9-AS1_CFAP70', 'DNAJC9-AS1', 'chr10', '75010595', '-', 'CFAP70', 'chr10', '75016173', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A07W-01A', '', '176', '', 'Out-of-Frame', 'Intra-chr', '10q22.2', '10q22.2', '', '', '', '', '', '', ''), ('16444', 'TopHat-Fusion', 'DNAJC9-AS1_CFAP70', 'DNAJC9-AS1', 'chr10', '75010681', '-', 'CFAP70', 'chr10', '75016173', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A07W-01A', '', '176', '', 'Out-of-Frame', 'Intra-chr', '10q22.2', '10q22.2', '', '', '', '', '', '', ''), ('16445', 'TopHat-Fusion', 'DNAJC9-AS1_CFAP70', 'DNAJC9-AS1', 'chr10', '75011520', '-', 'CFAP70', 'chr10', '75016173', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A07W-01A', '', '176', '', 'Out-of-Frame', 'Intra-chr', '10q22.2', '10q22.2', '', '', '', '', '', '', ''), ('16446', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0D4-01A', '', '116', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('16447', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48270000', '-', 'COL1A2', 'chr7', '94052286', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XU-01A', '', '176', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16448', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48270000', '-', 'COL1A2', 'chr7', '94052286', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1NH-01A', '', '108', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16449', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48273303', '-', 'COL1A2', 'chr7', '94043531', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XU-01A', '', '123', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16450', 'TopHat-Fusion', 'LINC00930_CHD2', 'LINC00930', 'chr15', '93113460', '-', 'CHD2', 'chr15', '93552552', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XU-01A', '', '112', '', 'Out-of-Frame', 'Intra-chr', '15q26.1', '15q26.1', '', '', '', '', '', '', ''), ('16451', 'TopHat-Fusion', 'ZSWIM3_LOC101927770', 'ZSWIM3', 'chr20', '44491589', '-', 'LOC101927770', 'chr20', '52183897', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A105-01A', '', '322', '', 'Out-of-Frame', 'Intra-chr', '20q13.12', '20q13.2', '', '', '', '', '', '', ''), ('16452', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1LH-01A', '', '206', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16453', 'TopHat-Fusion', 'PILRA_PILRB', 'PILRA', 'chr7', '99972055', '+', 'PILRB', 'chr7', '99964715', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1NH-01A', '', '184', '', 'In-Frame', 'Intra-chr', '7q22.1', '7q22.1', '', '', '', '', '', '', ''), ('16454', 'TopHat-Fusion', 'LOC101928295_EEF1A2', 'LOC101928295', 'chr19', '49877973', '-', 'EEF1A2', 'chr20', '62121831', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XD-01A', '', '371', '', 'Out-of-Frame', 'Inter-chr', '19q13.33', '20q13.33', '', '', '', '', '', '', ''), ('16455', 'TopHat-Fusion', 'ESR1_CCDC170', 'ESR1', 'chr6', '152064277', '+', 'CCDC170', 'chr6', '151930152', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A4S3-01A', '', '271', '', '5\'UTR-CDS', 'Intra-chr', '6q25.1', '6q25.1', '', '', '', '', '', '', 'Pub'), ('16456', 'TopHat-Fusion', 'SLC22A5_SLC22A4', 'SLC22A5', 'chr5', '131724712', '+', 'SLC22A4', 'chr5', '131679452', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1RH-01A', '', '183', '', 'In-Frame', 'Intra-chr', '5q31.1', '5q31.1', '', '', '', '', '', '', ''), ('16457', 'TopHat-Fusion', 'SLC22A5_SLC22A4', 'SLC22A5', 'chr5', '131726595', '+', 'SLC22A4', 'chr5', '131679452', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1RH-01A', '', '183', '', 'Out-of-Frame', 'Intra-chr', '5q31.1', '5q31.1', '', '', '', '', '', '', ''), ('16458', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AQ-A1H3-01A', '', '509', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16459', 'TopHat-Fusion', 'DGKD_USP40', 'DGKD', 'chr2', '234299128', '+', 'USP40', 'chr2', '234431807', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1RH-01A', '', '136', '', 'Out-of-Frame', 'Intra-chr', '2q37.1', '2q37.1', 'Kinase', '', '', '', '', '', ''), ('16460', 'TopHat-Fusion', 'PBX1_COPG2', 'PBX1', 'chr1', '164532547', '+', 'COPG2', 'chr7', '130148499', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A1FW-01A', '', '1165', '', 'In-Frame', 'Inter-chr', '1q23.3', '7q32.2', '', '', '', '', '', '', ''), ('16461', 'TopHat-Fusion', 'PIH1D1_ALDH16A1', 'PIH1D1', 'chr19', '49954741', '-', 'ALDH16A1', 'chr19', '49961742', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XD-01A', '', '103', '', 'In-Frame', 'Intra-chr', '19q13.33', '19q13.33', '', '', '', '', '', '', ''), ('16462', 'TopHat-Fusion', 'LINC01237_LOC728323', 'LINC01237', 'chr2', '242853047', '+', 'LOC728323', 'chr2', '243037037', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A1EV-01A', '', '108', '', 'Out-of-Frame', 'Intra-chr', '2q37.3', '2q37.3', '', '', '', '', '', '', ''), ('16463', 'TopHat-Fusion', 'CYP4Z1_CYP4X1', 'CYP4Z1', 'chr1', '47550649', '+', 'CYP4X1', 'chr1', '47497107', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A255-01A', '', '325', '', 'In-Frame', 'Intra-chr', '1p33', '1p33', '', '', '', '', '', '', ''), ('16464', 'TopHat-Fusion', 'CPD_AATF', 'CPD', 'chr17', '28748000', '+', 'AATF', 'chr17', '35376303', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A1FW-01A', '', '445', '', 'In-Frame', 'Intra-chr', '17q11.2', '17q12', '', '', '', '', '', '', ''), ('16465', 'TopHat-Fusion', 'POGK_FMOD', 'POGK', 'chr1', '166810324', '+', 'FMOD', 'chr1', '203311621', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A1FW-01A', '', '117', '', 'Out-of-Frame', 'Intra-chr', '1q24.1', '1q32.1', '', '', '', '', '', '', ''), ('16466', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A1FW-01A', '', '120', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('16467', 'TopHat-Fusion', 'SRGAP2-AS1_STK35', 'SRGAP2-AS1', 'chr1', '121121667', '-', 'STK35', 'chr20', '2128570', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A1FW-01A', '', '232', '', 'Out-of-Frame', 'Inter-chr', '1p11.2', '20p13', '', '', '', '', '', '', ''), ('16468', 'TopHat-Fusion', 'DDX5_ART1', 'DDX5', 'chr17', '62499547', '-', 'ART1', 'chr11', '3685321', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1RH-01A', '', '223', '', 'In-Frame', 'Inter-chr', '17q23.3', '11p15.4', '', '', '', '', '', '', ''), ('16469', 'TopHat-Fusion', 'RAD21_HK1', 'RAD21', 'chr8', '117861126', '-', 'HK1', 'chr10', '71146173', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1RH-01A', '', '124', '', 'In-Frame', 'Inter-chr', '8q24.11', '10q22.1', 'Kinase', '', '', '', '', '', ''), ('16470', 'TopHat-Fusion', 'VMP1_RNFT1', 'VMP1', 'chr17', '57851245', '+', 'RNFT1', 'chr17', '58031506', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A1FW-01A', '', '131', '', 'In-Frame', 'Intra-chr', '17q23.1', '17q23.1', '', '', '', '', '', '', ''), ('16471', 'TopHat-Fusion', 'RALY-AS1_MAP1LC3A', 'RALY-AS1', 'chr20', '32581936', '+', 'MAP1LC3A', 'chr20', '33147011', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XD-01A', '', '253', '', 'Out-of-Frame', 'Intra-chr', '20q11.22', '20q11.22', '', '', '', '', '', '', ''), ('16472', 'TopHat-Fusion', 'RALY-AS1_MAP1LC3A', 'RALY-AS1', 'chr20', '32581936', '+', 'MAP1LC3A', 'chr20', '33147150', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XD-01A', '', '253', '', 'Out-of-Frame', 'Intra-chr', '20q11.22', '20q11.22', '', '', '', '', '', '', ''), ('16473', 'TopHat-Fusion', 'C17orf75_ZNF207', 'C17orf75', 'chr17', '30664939', '-', 'ZNF207', 'chr17', '30678930', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A1FW-01A', '', '101', '', 'Out-of-Frame', 'Intra-chr', '17q11.2', '17q11.2', '', '', '', '', '', '', ''), ('16474', 'TopHat-Fusion', 'LRRC59_MCM8-AS1', 'LRRC59', 'chr17', '48468559', '-', 'MCM8-AS1', 'chr20', '5985600', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A1FW-01A', '', '147', '', 'CDS-3\'UTR', 'Inter-chr', '17q21.33', '20p12.3', '', '', '', '', '', '', ''), ('16475', 'TopHat-Fusion', 'RASEF_FRMD3', 'RASEF', 'chr9', '85645598', '-', 'FRMD3', 'chr9', '86152999', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XD-01A', '', '179', '', 'Out-of-Frame', 'Intra-chr', '9q21.32', '9q21.32', '', '', '', '', '', '', ''), ('16476', 'TopHat-Fusion', 'RASEF_FRMD3', 'RASEF', 'chr9', '85651086', '-', 'FRMD3', 'chr9', '86152999', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XD-01A', '', '179', '', 'Out-of-Frame', 'Intra-chr', '9q21.32', '9q21.32', '', '', '', '', '', '', ''), ('16477', 'TopHat-Fusion', 'TUFT1_PRKCA', 'TUFT1', 'chr1', '151512901', '+', 'PRKCA', 'chr17', '64782984', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A1FW-01A', '', '395', '', 'In-Frame', 'Inter-chr', '1q21.3', '17q24.2', '', '', '', '', '', '', ''), ('16478', 'TopHat-Fusion', 'RAB3GAP2_CNIH4', 'RAB3GAP2', 'chr1', '220383729', '-', 'CNIH4', 'chr1', '224563496', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A1FW-01A', '', '176', '', 'Out-of-Frame', 'Intra-chr', '1q41', '1q42.11', '', '', '', '', '', '', ''), ('16479', 'TopHat-Fusion', 'FLOT2_KRT12', 'FLOT2', 'chr17', '27224543', '-', 'KRT12', 'chr17', '39022488', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A1EV-01A', '', '1634', '', 'Out-of-Frame', 'Intra-chr', '17q11.2', '17q21.2', '', '', '', '', '', '', ''), ('16480', 'TopHat-Fusion', 'FLOT2_KRT12', 'FLOT2', 'chr17', '27224543', '-', 'KRT12', 'chr17', '39023033', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A1EV-01A', '', '1634', '', 'Out-of-Frame', 'Intra-chr', '17q11.2', '17q21.2', '', '', '', '', '', '', ''), ('16481', 'TopHat-Fusion', 'PARK7_FAM186B', 'PARK7', 'chr1', '8025447', '+', 'FAM186B', 'chr12', '49988964', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IC-01A', '', '100', '', 'In-Frame', 'Inter-chr', '1p36.23', '12q13.12', '', '', '', '', '', '', ''), ('16482', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A3W5-01A', '', '236', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16483', 'TopHat-Fusion', 'WAC_APBB1IP', 'WAC', 'chr10', '28824685', '+', 'APBB1IP', 'chr10', '26849033', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A0JI-01A', '', '135', '', 'Out-of-Frame', 'Intra-chr', '10p12.1', '10p12.1', '', '', '', '', '', '', ''), ('16484', 'TopHat-Fusion', 'PPTC7_TCTN1', 'PPTC7', 'chr12', '110989593', '-', 'TCTN1', 'chr12', '111065980', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A26X-01A', '', '266', '', 'Out-of-Frame', 'Intra-chr', '12q24.11', '12q24.11', '', '', '', '', '', '', ''), ('16485', 'TopHat-Fusion', 'IDE_FRA10AC1', 'IDE', 'chr10', '94292613', '-', 'FRA10AC1', 'chr10', '95445787', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0HP-01A', '', '111', '', 'Out-of-Frame', 'Intra-chr', '10q23.33', '10q23.33', '', '', '', '', '', '', ''), ('16486', 'TopHat-Fusion', 'IDE_FRA10AC1', 'IDE', 'chr10', '94292613', '-', 'FRA10AC1', 'chr10', '95447159', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0HP-01A', '', '112', '', 'In-Frame', 'Intra-chr', '10q23.33', '10q23.33', '', '', '', '', '', '', ''), ('16487', 'TopHat-Fusion', 'CPD_MYO1D', 'CPD', 'chr17', '28706743', '+', 'MYO1D', 'chr17', '31122704', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A3W5-01A', '', '343', '', 'Out-of-Frame', 'Intra-chr', '17q11.2', '17q11.2', '', '', '', '', '', '', ''), ('16488', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B2-01A', '', '125', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('16489', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677320', '+', 'IGLL5', 'chr22', '23235959', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B2-01A', '', '301', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16490', 'TopHat-Fusion', 'TTC3_TMPRSS2', 'TTC3', 'chr21', '38480745', '+', 'TMPRSS2', 'chr21', '42840163', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A130-01A', '', '125', '', 'Out-of-Frame', 'Intra-chr', '21q22.13', '21q22.3', '', '', '', '', '', '', ''), ('16491', 'TopHat-Fusion', 'TTC3_TMPRSS2', 'TTC3', 'chr21', '38489250', '+', 'TMPRSS2', 'chr21', '42838699', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A130-01A', '', '113', '', 'In-Frame', 'Intra-chr', '21q22.13', '21q22.3', '', '', '', '', '', '', ''), ('16492', 'TopHat-Fusion', 'CTTN_SHANK2', 'CTTN', 'chr11', '70275304', '+', 'SHANK2', 'chr11', '70687785', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A3OD-01A', '', '183', '', 'Out-of-Frame', 'Intra-chr', '11q13.3', '11q13.4', '', '', '', '', '', '', ''), ('16493', 'TopHat-Fusion', 'CTTN_SHANK2', 'CTTN', 'chr11', '70275546', '+', 'SHANK2', 'chr11', '70683444', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A3OD-01A', '', '183', '', 'In-Frame', 'Intra-chr', '11q13.3', '11q13.4', '', '', '', '', '', '', ''), ('16494', 'TopHat-Fusion', 'NEU3_NDUFV1', 'NEU3', 'chr11', '74700198', '+', 'NDUFV1', 'chr11', '67375866', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A3OD-01A', '', '127', '', 'Out-of-Frame', 'Intra-chr', '11q13.4', '11q13.2', '', '', '', '', '', '', ''), ('16495', 'TopHat-Fusion', 'NEU3_NDUFV1', 'NEU3', 'chr11', '74700198', '+', 'NDUFV1', 'chr11', '67375870', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A3OD-01A', '', '127', '', 'Out-of-Frame', 'Intra-chr', '11q13.4', '11q13.2', '', '', '', '', '', '', ''), ('16496', 'TopHat-Fusion', 'SLF1_ZMYM2', 'SLF1', 'chr5', '93977098', '+', 'ZMYM2', 'chr13', '20641529', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A3OD-01A', '', '107', '', 'Out-of-Frame', 'Inter-chr', '5q15', '13q12.11', '', '', '', '', '', '', ''), ('16497', 'TopHat-Fusion', 'VWCE_RAB1B', 'VWCE', 'chr11', '61041071', '-', 'RAB1B', 'chr11', '66039930', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A27N-01A', '', '129', '', 'In-Frame', 'Intra-chr', '11q12.2', '11q13.2', '', '', '', '', '', '', ''), ('16498', 'TopHat-Fusion', 'VWCE_RAB1B', 'VWCE', 'chr11', '61045820', '-', 'RAB1B', 'chr11', '66039930', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A27N-01A', '', '129', '', 'In-Frame', 'Intra-chr', '11q12.2', '11q13.2', '', '', '', '', '', '', ''), ('16499', 'TopHat-Fusion', 'PHB_LSM1', 'PHB', 'chr17', '47490538', '-', 'LSM1', 'chr8', '38029550', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0CU-01A', '', '127', '', 'In-Frame', 'Inter-chr', '17q21.33', '8p11.23', '', '', '', '', '', '', ''), ('16500', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A3OD-01A', '', '173', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('16501', 'TopHat-Fusion', 'PILRA_PILRB', 'PILRA', 'chr7', '99972055', '+', 'PILRB', 'chr7', '99964715', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B2-01A', '', '189', '', 'In-Frame', 'Intra-chr', '7q22.1', '7q22.1', '', '', '', '', '', '', ''), ('16502', 'TopHat-Fusion', 'PILRA_PILRB', 'PILRA', 'chr7', '99972055', '+', 'PILRB', 'chr7', '99964715', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A27N-01A', '', '396', '', 'In-Frame', 'Intra-chr', '7q22.1', '7q22.1', '', '', '', '', '', '', ''), ('16503', 'TopHat-Fusion', 'ALDH3B2_ALDH3B1', 'ALDH3B2', 'chr11', '67434044', '-', 'ALDH3B1', 'chr11', '67786638', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A25C-01A', '', '782', '', 'Out-of-Frame', 'Intra-chr', '11q13.2', '11q13.2', '', '', '', '', '', '', ''), ('16504', 'TopHat-Fusion', 'HPRT1_CTPS2', 'HPRT1', 'chrX', '133609393', '+', 'CTPS2', 'chrX', '16657365', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24W-01A', '', '513', '', 'In-Frame', 'Intra-chr', 'Xq26.3', 'Xp22.2', '', '', '', '', '', '', ''), ('16505', 'TopHat-Fusion', 'BRWD1_DSCAM', 'BRWD1', 'chr21', '40636385', '-', 'DSCAM', 'chr21', '41607576', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1LG-01A', '', '236', '', 'Out-of-Frame', 'Intra-chr', '21q22.2', '21q22.2', '', '', '', '', '', '', ''), ('16506', 'TopHat-Fusion', 'MSI2_PCTP', 'MSI2', 'chr17', '55339552', '+', 'PCTP', 'chr17', '53844695', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A27F-01A', '', '174', '', 'In-Frame', 'Intra-chr', '17q22', '17q22', '', '', '', '', '', '', ''), ('16507', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IG-01A', '', '120', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16508', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677324', '+', 'IGLL5', 'chr22', '23235963', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1LG-01A', '', '803', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16509', 'TopHat-Fusion', 'GNAI3_SARS', 'GNAI3', 'chr1', '110091459', '+', 'SARS', 'chr1', '109766599', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14P-01A', '', '259', '', 'In-Frame', 'Intra-chr', '1p13.3', '1p13.3', '', '', '', '', '', '', ''), ('16510', 'TopHat-Fusion', 'WARS2_ASIC2', 'WARS2', 'chr1', '119618972', '-', 'ASIC2', 'chr17', '31749746', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IG-01A', '', '198', '', 'Out-of-Frame', 'Inter-chr', '1p12', '17q11.2', '', '', '', '', '', '', ''), ('16511', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A1KC-01B', '', '276', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('16512', 'TopHat-Fusion', 'TUT1_HNRNPUL2-BSCL2', 'TUT1', 'chr11', '62356502', '-', 'HNRNPUL2-BSCL2', 'chr11', '62462182', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I1-01A', '', '354', '', 'CDS-3\'UTR', 'Intra-chr', '11q12.3', '11q12.3', '', '', '', '', '', '', ''), ('16513', 'TopHat-Fusion', 'THBS1_FSIP1', 'THBS1', 'chr15', '39879521', '-', 'FSIP1', 'chr15', '39893126', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A26J-01B', '', '115', '', 'Out-of-Frame', 'Intra-chr', '15q14', '15q14', '', '', '', '', '', '', ''), ('16514', 'TopHat-Fusion', 'FNTA_NKAIN3', 'FNTA', 'chr8', '42927449', '+', 'NKAIN3', 'chr8', '63679968', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1LG-01A', '', '120', '', 'Out-of-Frame', 'Intra-chr', '8p11.21', '8q12.3', '', '', '', '', '', '', ''), ('16515', 'TopHat-Fusion', 'SMARCC1_DHX30', 'SMARCC1', 'chr3', '47770514', '-', 'DHX30', 'chr3', '47857642', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I1-01A', '', '139', '', 'Out-of-Frame', 'Intra-chr', '3p21.31', '3p21.31', '', '', '', '', '', '', ''), ('16516', 'TopHat-Fusion', 'KDM2A_RHOD', 'KDM2A', 'chr11', '67017816', '+', 'RHOD', 'chr11', '66833366', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IG-01A', '', '139', '', 'Out-of-Frame', 'Intra-chr', '11q13.2', '11q13.2', '', '', '', '', '', '', ''), ('16517', 'TopHat-Fusion', 'KDM2A_RHOD', 'KDM2A', 'chr11', '67018268', '+', 'RHOD', 'chr11', '66833366', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IG-01A', '', '139', '', 'Out-of-Frame', 'Intra-chr', '11q13.2', '11q13.2', '', '', '', '', '', '', ''), ('16518', 'TopHat-Fusion', 'ZNF703_EIF4EBP1', 'ZNF703', 'chr8', '37553739', '+', 'EIF4EBP1', 'chr8', '37914598', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A5QQ-01A', '', '285', '', 'Out-of-Frame', 'Intra-chr', '8p11.23', '8p11.23', '', '', '', '', 'Transcription_Factor', '', ''), ('16519', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A0AK-01A', '', '103', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('16520', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677320', '+', 'IGLL5', 'chr22', '23235959', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-LD-A66U-01A', '', '205', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16521', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1PA-01A', '', '261', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16522', 'TopHat-Fusion', 'TFAP2A_GCNT2', 'TFAP2A', 'chr6', '10400983', '-', 'GCNT2', 'chr6', '10530068', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12K-01A', '', '124', '', 'In-Frame', 'Intra-chr', '6p24.3', '6p24.3', '', '', '', '', '', '', ''), ('16523', 'TopHat-Fusion', 'CPD_GOSR1', 'CPD', 'chr17', '28756582', '+', 'GOSR1', 'chr17', '28819770', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12K-01A', '', '193', '', 'Out-of-Frame', 'Intra-chr', '17q11.2', '17q11.2', '', '', '', '', '', '', ''), ('16524', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0YJ-01A', '', '104', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16525', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14X-01A', '', '220', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16526', 'TopHat-Fusion', 'PILRA_PILRB', 'PILRA', 'chr7', '99972055', '+', 'PILRB', 'chr7', '99964715', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12K-01A', '', '349', '', 'In-Frame', 'Intra-chr', '7q22.1', '7q22.1', '', '', '', '', '', '', ''), ('16527', 'TopHat-Fusion', 'ELP2_MAPRE2', 'ELP2', 'chr18', '33734961', '+', 'MAPRE2', 'chr18', '32681909', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0D2-01A', '', '171', '', 'In-Frame', 'Intra-chr', '18q12.2', '18q12.1', '', '', '', '', '', '', ''), ('16528', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A0TU-01A', '', '131', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16529', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-LD-A9QF-01A', '', '295', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16530', 'TopHat-Fusion', 'CLSTN1_CTNNBIP1', 'CLSTN1', 'chr1', '9833329', '-', 'CTNNBIP1', 'chr1', '9910833', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A0TU-01A', '', '166', '', 'In-Frame', 'Intra-chr', '1p36.22', '1p36.22', '', '', '', '', '', '', ''), ('16531', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0D2-01A', '', '105', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('16532', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A09B-01A', '', '106', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('16533', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-GM-A2DH-01A', '', '105', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('16534', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0T0-01A', '', '111', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16535', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A09B-01A', '', '154', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16536', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A03U-01B', '', '107', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16537', 'TopHat-Fusion', 'PILRA_PILRB', 'PILRA', 'chr7', '99972055', '+', 'PILRB', 'chr7', '99964715', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A03U-01B', '', '234', '', 'In-Frame', 'Intra-chr', '7q22.1', '7q22.1', '', '', '', '', '', '', ''), ('16538', 'TopHat-Fusion', 'SEC61A2_MAPK14', 'SEC61A2', 'chr10', '12209809', '+', 'MAPK14', 'chr6', '36059929', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0T0-01A', '', '166', '', 'In-Frame', 'Inter-chr', '10p13', '6p21.31', '', '', '', '', '', '', ''), ('16539', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677324', '+', 'IGLL5', 'chr22', '23235963', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0EY-01A', '', '330', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16540', 'TopHat-Fusion', 'ATP8B1_NARS', 'ATP8B1', 'chr18', '55398858', '-', 'NARS', 'chr18', '55278938', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A03O-01A', '', '168', '', '', 'Intra-chr', '18q21.31', '18q21.31', '', '', '', '', '', '', ''), ('16541', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A0AT-01A', '', '105', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('16542', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A27W-01A', '', '153', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('16543', 'TopHat-Fusion', 'THADA_PPM1B', 'THADA', 'chr2', '43489476', '-', 'PPM1B', 'chr2', '44436465', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A0AT-01A', '', '127', '', 'Out-of-Frame', 'Intra-chr', '2p21', '2p21', '', '', '', '', '', '', ''), ('16544', 'TopHat-Fusion', 'DOCK5_KIF13B', 'DOCK5', 'chr8', '25168047', '+', 'KIF13B', 'chr8', '29113767', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A18I-01A', '', '263', '', 'Out-of-Frame', 'Intra-chr', '8p21.2', '8p12', '', '', '', '', '', '', ''), ('16545', 'TopHat-Fusion', 'DOCK5_KIF13B', 'DOCK5', 'chr8', '25168169', '+', 'KIF13B', 'chr8', '29120496', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A18I-01A', '', '240', '', 'In-Frame', 'Intra-chr', '8p21.2', '8p12', '', '', '', '', '', '', ''), ('16546', 'TopHat-Fusion', 'CAPZA2_CFTR', 'CAPZA2', 'chr7', '116552193', '+', 'CFTR', 'chr7', '117133981', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A2QH-01B', '', '182', '', 'Out-of-Frame', 'Intra-chr', '7q31.2', '7q31.2', '', '', '', '', '', '', ''), ('16547', 'TopHat-Fusion', 'CAPZA2_CFTR', 'CAPZA2', 'chr7', '116552193', '+', 'CFTR', 'chr7', '117137596', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A2QH-01B', '', '186', '', 'Out-of-Frame', 'Intra-chr', '7q31.2', '7q31.2', '', '', '', '', '', '', ''), ('16548', 'TopHat-Fusion', 'CAPZA2_CFTR', 'CAPZA2', 'chr7', '116552193', '+', 'CFTR', 'chr7', '117137734', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A2QH-01B', '', '206', '', 'Out-of-Frame', 'Intra-chr', '7q31.2', '7q31.2', '', '', '', '', '', '', ''), ('16549', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A0AT-01A', '', '136', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16550', 'TopHat-Fusion', 'NME1-NME2_CEP112', 'NME1-NME2', 'chr17', '49243041', '+', 'CEP112', 'chr17', '63637182', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A0JM-01A', '', '125', '', '3\'UTR-3\'UTR', 'Intra-chr', '17q21.33', '17q24.1', '', '', '', '', '', '', ''), ('16551', 'TopHat-Fusion', 'TCF3_JAK2', 'TCF3', 'chr19', '1615718', '-', 'JAK2', 'chr9', '5112398', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5S0-01A', '', '124', '', 'In-Frame', 'Inter-chr', '19p13.3', '9p24.1', 'Kinase', 'Oncogene', '', '', 'Transcription_Factor', '', ''), ('16552', 'TopHat-Fusion', 'RGS6_CETP', 'RGS6', 'chr14', '72632039', '+', 'CETP', 'chr16', '57009062', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A06U-01A', '', '196', '', 'In-Frame', 'Inter-chr', '14q24.2', '16q13', '', '', '', '', '', '', ''), ('16553', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A04D-01A', '', '129', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('16554', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A0J3-01A', '', '173', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('16555', 'TopHat-Fusion', 'MPDZ_B4GALT1', 'MPDZ', 'chr9', '13190160', '-', 'B4GALT1', 'chr9', '33135186', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A04D-01A', '', '690', '', 'In-Frame', 'Intra-chr', '9p23', '9p21.1', '', '', '', '', '', '', ''), ('16556', 'TopHat-Fusion', 'FRS2_MYRFL', 'FRS2', 'chr12', '69864309', '+', 'MYRFL', 'chr12', '70284750', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A08F-01A', '', '227', '', 'Out-of-Frame', 'Intra-chr', '12q15', '12q15', '', '', '', '', '', '', ''), ('16557', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48273303', '-', 'COL1A2', 'chr7', '94043531', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1N4-01A', '', '133', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16558', 'TopHat-Fusion', 'KIAA0100_UBE2Z', 'KIAA0100', 'chr17', '26961600', '-', 'UBE2Z', 'chr17', '47000298', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1LB-01A', '', '147', '', 'Out-of-Frame', 'Intra-chr', '17q11.2', '17q21.32', '', '', '', '', '', '', ''), ('16559', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94047863', '+', 'COL1A1', 'chr17', '48265961', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1N4-01A', '', '124', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('16560', 'TopHat-Fusion', 'TAOK1_NSRP1', 'TAOK1', 'chr17', '27718041', '+', 'NSRP1', 'chr17', '28499559', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1LB-01A', '', '142', '', '5\'UTR-CDS', 'Intra-chr', '17q11.2', '17q11.2', '', '', '', '', '', '', ''), ('16561', 'TopHat-Fusion', 'ADGRG1_LOC100996338', 'ADGRG1', 'chr16', '57653792', '+', 'LOC100996338', 'chr16', '54280873', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A06U-01A', '', '2195', '', 'Out-of-Frame', 'Intra-chr', '16q21', '16q12.2', '', '', '', '', '', '', ''), ('16562', 'TopHat-Fusion', 'ADGRG1_LOC100996338', 'ADGRG1', 'chr16', '57654047', '+', 'LOC100996338', 'chr16', '54280873', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A06U-01A', '', '2195', '', 'Out-of-Frame', 'Intra-chr', '16q21', '16q12.2', '', '', '', '', '', '', ''), ('16563', 'TopHat-Fusion', 'REEP5_XBP1', 'REEP5', 'chr5', '112221786', '-', 'XBP1', 'chr22', '29191199', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A08F-01A', '', '637', '', 'Out-of-Frame', 'Inter-chr', '5q22.2', '22q12.1', '', '', '', '', '', '', ''), ('16564', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677320', '+', 'IGLL5', 'chr22', '23235959', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-S3-AA17-01A', '', '3009', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16565', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677324', '+', 'IGLL5', 'chr22', '23235963', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0YH-01A', '', '583', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16566', 'TopHat-Fusion', 'SSH2_LBP', 'SSH2', 'chr17', '28022476', '-', 'LBP', 'chr20', '37002580', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A0FT-01A', '', '142', '', 'Out-of-Frame', 'Inter-chr', '17q11.2', '20q11.23', '', '', '', '', '', '', ''), ('16567', 'TopHat-Fusion', 'MRPL21_SSH3', 'MRPL21', 'chr11', '68663982', '-', 'SSH3', 'chr11', '67074308', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15O-01A', '', '116', '', 'In-Frame', 'Intra-chr', '11q13.3', '11q13.2', '', '', '', '', '', '', ''), ('16568', 'TopHat-Fusion', 'ERBB2_NARS2', 'ERBB2', 'chr17', '37866733', '+', 'NARS2', 'chr11', '78147859', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A1EN-01A', '', '1917', '', '', 'Inter-chr', '17q12', '11q14.1', '', '', '', '', '', '', ''), ('16569', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A049-01A', '', '117', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('16570', 'TopHat-Fusion', 'LOC101927318_AQP5', 'LOC101927318', 'chr12', '50356090', '-', 'AQP5', 'chr12', '50357274', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A1EN-01A', '', '104', '', 'Out-of-Frame', 'Intra-chr', '12q13.12', '12q13.12', '', '', '', '', '', '', ''), ('16571', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48270000', '-', 'COL1A2', 'chr7', '94052286', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A097-01A', '', '100', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16572', 'TopHat-Fusion', 'KDM3A_ANK3', 'KDM3A', 'chr2', '86684193', '+', 'ANK3', 'chr10', '61817353', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AN-01A', '', '116', '', 'In-Frame', 'Inter-chr', '2p11.2', '10q21.2', '', '', '', '', '', '', ''), ('16573', 'TopHat-Fusion', 'KDM3A_ANK3', 'KDM3A', 'chr2', '86684193', '+', 'ANK3', 'chr10', '61819091', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AN-01A', '', '125', '', 'In-Frame', 'Inter-chr', '2p11.2', '10q21.2', '', '', '', '', '', '', ''), ('16574', 'TopHat-Fusion', 'KDM3A_ANK3', 'KDM3A', 'chr2', '86687953', '+', 'ANK3', 'chr10', '61819091', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AN-01A', '', '125', '', 'In-Frame', 'Inter-chr', '2p11.2', '10q21.2', '', '', '', '', '', '', ''), ('16575', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48265892', '-', 'COL1A2', 'chr7', '94038658', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XY-01A', '', '166', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16576', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48273303', '-', 'COL1A2', 'chr7', '94043531', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XY-01A', '', '303', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16577', 'TopHat-Fusion', 'VMP1_C17orf64', 'VMP1', 'chr17', '57851245', '+', 'C17orf64', 'chr17', '58503143', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24R-01A', '', '236', '', 'In-Frame', 'Intra-chr', '17q23.1', '17q23.2', '', '', '', '', '', '', ''), ('16578', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94035614', '+', 'COL1A1', 'chr17', '48272460', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XY-01A', '', '151', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub');
INSERT INTO `ChimerSeq_dump` VALUES ('16579', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189856953', '+', 'COL1A1', 'chr17', '48266880', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XY-01A', '', '130', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16580', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189868187', '+', 'COL1A1', 'chr17', '48272674', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XY-01A', '', '230', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16581', 'TopHat-Fusion', 'COL1A2_COL3A1', 'COL1A2', 'chr7', '94051235', '+', 'COL3A1', 'chr2', '189867688', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XY-01A', '', '142', '', 'In-Frame', 'Inter-chr', '7q21.3', '2q32.2', '', '', '', '', '', '', ''), ('16582', 'TopHat-Fusion', 'BCAS3_PIGU', 'BCAS3', 'chr17', '58804920', '+', 'PIGU', 'chr20', '33244983', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24R-01A', '', '161', '', 'Out-of-Frame', 'Inter-chr', '17q23.2', '20q11.22', '', '', '', '', '', '', ''), ('16583', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0SX-01A', '', '100', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16584', 'TopHat-Fusion', 'SORL1_TECTA', 'SORL1', 'chr11', '121403260', '+', 'TECTA', 'chr11', '121058540', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A22G-01A', '', '358', '', 'In-Frame', 'Intra-chr', '11q24.1', '11q23.3', '', '', '', '', '', '', ''), ('16585', 'TopHat-Fusion', 'NUP214_AIF1L', 'NUP214', 'chr9', '134006222', '+', 'AIF1L', 'chr9', '133986983', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A22G-01A', '', '301', '', 'In-Frame', 'Intra-chr', '9q34.13', '9q34.12', '', '', '', '', '', '', ''), ('16586', 'TopHat-Fusion', 'CDH1_UTP4', 'CDH1', 'chr16', '68835795', '+', 'UTP4', 'chr16', '69170598', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A6VX-01A', '', '406', '', 'Out-of-Frame', 'Intra-chr', '16q22.1', '16q22.1', '', '', '', '', '', '', ''), ('16587', 'TopHat-Fusion', 'SUSD2_PTCHD1-AS', 'SUSD2', 'chr22', '24581061', '-', 'PTCHD1-AS', 'chrX', '23094145', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A247-01A', '', '191', '', 'CDS-5\'UTR', 'Inter-chr', '22q11.23', 'Xp22.11', '', '', '', '', '', '', ''), ('16588', 'TopHat-Fusion', 'TFG_ADGRG7', 'TFG', 'chr3', '100438901', '+', 'ADGRG7', 'chr3', '100348441', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A26I-01A', '', '275', '', 'Out-of-Frame', 'Intra-chr', '3q12.2', '3q12.2', '', '', '', '', '', '', ''), ('16589', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48270000', '-', 'COL1A2', 'chr7', '94052286', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IM-01A', '', '111', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16590', 'TopHat-Fusion', 'FAM3C_SUSD2', 'FAM3C', 'chr7', '121011353', '-', 'SUSD2', 'chr22', '24581061', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A247-01A', '', '137', '', 'In-Frame', 'Inter-chr', '7q31.31', '22q11.23', '', '', '', '', '', '', ''), ('16591', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A22G-01A', '', '130', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16592', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IM-01A', '', '111', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('16593', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0DV-01A', '', '104', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('16594', 'TopHat-Fusion', 'ROCK2_GREB1', 'ROCK2', 'chr2', '11363386', '-', 'GREB1', 'chr2', '11735530', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A0JD-01A', '', '356', '', 'In-Frame', 'Intra-chr', '2p25.1', '2p25.1', '', '', '', '', '', '', ''), ('16595', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677320', '+', 'IGLL5', 'chr22', '23235959', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A6S9-01A', '', '149', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16596', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235963', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A096-01A', '', '100', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16597', 'TopHat-Fusion', 'PTGFRN_TRIM45', 'PTGFRN', 'chr1', '117489862', '+', 'TRIM45', 'chr1', '117657228', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1LS-01A', '', '364', '', 'Out-of-Frame', 'Intra-chr', '1p13.1', '1p13.1', '', '', '', '', '', '', ''), ('16598', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94035614', '+', 'COL1A1', 'chr17', '48272460', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1NF-01A', '', '187', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('16599', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94049597', '+', 'COL1A1', 'chr17', '48265997', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1NF-01A', '', '422', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('16600', 'TopHat-Fusion', 'SPTBN4_NUMBL', 'SPTBN4', 'chr19', '41061000', '+', 'NUMBL', 'chr19', '41188632', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A18V-01A', '', '112', '', 'In-Frame', 'Intra-chr', '19q13.2', '19q13.2', '', '', '', '', '', '', ''), ('16601', 'TopHat-Fusion', 'SPTBN4_NUMBL', 'SPTBN4', 'chr19', '41063353', '+', 'NUMBL', 'chr19', '41188632', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A18V-01A', '', '112', '', 'Out-of-Frame', 'Intra-chr', '19q13.2', '19q13.2', '', '', '', '', '', '', ''), ('16602', 'TopHat-Fusion', 'PPP2CA_CDKL3', 'PPP2CA', 'chr5', '133561450', '-', 'CDKL3', 'chr5', '133640257', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A0JD-01A', '', '170', '', 'In-Frame', 'Intra-chr', '5q31.1', '5q31.1', 'Kinase', '', '', '', '', '', ''), ('16603', 'TopHat-Fusion', 'PPP2CA_CDKL3', 'PPP2CA', 'chr5', '133561450', '-', 'CDKL3', 'chr5', '133642392', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A0JD-01A', '', '170', '', 'Out-of-Frame', 'Intra-chr', '5q31.1', '5q31.1', 'Kinase', '', '', '', '', '', ''), ('16604', 'TopHat-Fusion', 'PPP2CA_CDKL3', 'PPP2CA', 'chr5', '133561450', '-', 'CDKL3', 'chr5', '133644156', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A0JD-01A', '', '170', '', 'In-Frame', 'Intra-chr', '5q31.1', '5q31.1', 'Kinase', '', '', '', '', '', ''), ('16605', 'TopHat-Fusion', 'PPP2CA_CDKL3', 'PPP2CA', 'chr5', '133561450', '-', 'CDKL3', 'chr5', '133644417', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A0JD-01A', '', '163', '', 'Out-of-Frame', 'Intra-chr', '5q31.1', '5q31.1', 'Kinase', '', '', '', '', '', ''), ('16606', 'TopHat-Fusion', 'SARS_KIAA1324', 'SARS', 'chr1', '109756749', '+', 'KIAA1324', 'chr1', '109704515', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A18V-01A', '', '147', '', 'Out-of-Frame', 'Intra-chr', '1p13.3', '1p13.3', '', '', '', '', '', '', ''), ('16607', 'TopHat-Fusion', 'SARS_KIAA1324', 'SARS', 'chr1', '109766669', '+', 'KIAA1324', 'chr1', '109704515', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A18V-01A', '', '125', '', 'In-Frame', 'Intra-chr', '1p13.3', '1p13.3', '', '', '', '', '', '', ''), ('16608', 'TopHat-Fusion', 'NGRN_IQGAP1', 'NGRN', 'chr15', '90809522', '+', 'IQGAP1', 'chr15', '90969497', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1NF-01A', '', '150', '', 'In-Frame', 'Intra-chr', '15q26.1', '15q26.1', '', '', '', '', '', '', ''), ('16609', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48265892', '-', 'COL1A2', 'chr7', '94038658', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1NF-01A', '', '241', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16610', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48273303', '-', 'COL1A2', 'chr7', '94043531', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1NF-01A', '', '359', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16611', 'TopHat-Fusion', 'PPM1D_TRIM37', 'PPM1D', 'chr17', '58711337', '+', 'TRIM37', 'chr17', '57060281', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14V-01A', '', '271', '', 'Out-of-Frame', 'Intra-chr', '17q23.2', '17q22', '', '', '', '', '', '', ''), ('16612', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189856953', '+', 'COL1A1', 'chr17', '48266880', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1NF-01A', '', '103', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16613', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189868187', '+', 'COL1A1', 'chr17', '48272674', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1NF-01A', '', '216', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16614', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189871715', '+', 'COL1A1', 'chr17', '48264897', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1NF-01A', '', '187', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16615', 'TopHat-Fusion', 'COL1A1_COL3A1', 'COL1A1', 'chr17', '48269148', '-', 'COL3A1', 'chr2', '189863408', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1NF-01A', '', '230', '', 'In-Frame', 'Inter-chr', '17q21.33', '2q32.2', '', '', '', '', '', '', ''), ('16616', 'TopHat-Fusion', 'PTEN_RPL11', 'PTEN', 'chr10', '89705770', '+', 'RPL11', 'chr1', '24022859', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1LS-01A', '', '202', '', 'Out-of-Frame', 'Inter-chr', '10q23.31', '1p36.11', '', '', '', '', '', '', ''), ('16617', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0DL-01A', '', '1675', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16618', 'TopHat-Fusion', 'CASC8_PVT1', 'CASC8', 'chr8', '128411137', '-', 'PVT1', 'chr8', '128903243', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A158-01A', '', '148', '', 'Out-of-Frame', 'Intra-chr', '8q24.21', '8q24.21', '', '', '', '', '', '', ''), ('16619', 'TopHat-Fusion', 'CASC8_PVT1', 'CASC8', 'chr8', '128411137', '-', 'PVT1', 'chr8', '128951921', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A158-01A', '', '493', '', 'Out-of-Frame', 'Intra-chr', '8q24.21', '8q24.21', '', '', '', '', '', '', ''), ('16620', 'TopHat-Fusion', 'WDR49_THSD4', 'WDR49', 'chr3', '167277784', '-', 'THSD4', 'chr15', '72022818', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15A-06A', '', '140', '', 'Out-of-Frame', 'Inter-chr', '3q26.1', '15q23', '', '', '', '', '', '', ''), ('16621', 'TopHat-Fusion', 'WDR49_THSD4', 'WDR49', 'chr3', '167279029', '-', 'THSD4', 'chr15', '72021062', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15A-06A', '', '140', '', 'Out-of-Frame', 'Inter-chr', '3q26.1', '15q23', '', '', '', '', '', '', ''), ('16622', 'TopHat-Fusion', 'ZFP91-CNTF_ANO1-AS2', 'ZFP91-CNTF', 'chr11', '58352356', '+', 'ANO1-AS2', 'chr11', '69919044', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0DL-01A', '', '113', '', 'CDS-3\'UTR', 'Intra-chr', '11q12.1', '11q13.3', '', '', '', '', '', '', ''), ('16623', 'TopHat-Fusion', 'CDC25C_ANKHD1-EIF4EBP3', 'CDC25C', 'chr5', '137661520', '-', 'ANKHD1-EIF4EBP3', 'chr5', '139866644', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15A-06A', '', '190', '', 'In-Frame', 'Intra-chr', '5q31.2', '5q31.3', '', '', '', '', '', '', ''), ('16624', 'TopHat-Fusion', 'RAB11FIP1_UNC5D', 'RAB11FIP1', 'chr8', '37734626', '-', 'UNC5D', 'chr8', '35647876', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-S3-A6ZH-01A', '', '133', '', 'Out-of-Frame', 'Intra-chr', '8p11.23', '8p12', '', '', '', '', '', '', ''), ('16625', 'TopHat-Fusion', 'THBS1_FSIP1', 'THBS1', 'chr15', '39886255', '-', 'FSIP1', 'chr15', '39910445', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15A-06A', '', '113', '', 'Out-of-Frame', 'Intra-chr', '15q14', '15q14', '', '', '', '', '', '', ''), ('16626', 'TopHat-Fusion', 'THBS1_FSIP1', 'THBS1', 'chr15', '39886255', '-', 'FSIP1', 'chr15', '39931613', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15A-06A', '', '125', '', 'In-Frame', 'Intra-chr', '15q14', '15q14', '', '', '', '', '', '', ''), ('16627', 'TopHat-Fusion', 'GUCD1_SNRPD3', 'GUCD1', 'chr22', '24938622', '-', 'SNRPD3', 'chr22', '24953767', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A158-01A', '', '137', '', 'Out-of-Frame', 'Intra-chr', '22q11.23', '22q11.23', '', '', '', '', '', '', ''), ('16628', 'TopHat-Fusion', 'GUCD1_SNRPD3', 'GUCD1', 'chr22', '24948042', '-', 'SNRPD3', 'chr22', '24953767', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A158-01A', '', '132', '', 'Out-of-Frame', 'Intra-chr', '22q11.23', '22q11.23', '', '', '', '', '', '', ''), ('16629', 'TopHat-Fusion', 'GUCD1_SNRPD3', 'GUCD1', 'chr22', '24948051', '-', 'SNRPD3', 'chr22', '24953767', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A158-01A', '', '132', '', 'Out-of-Frame', 'Intra-chr', '22q11.23', '22q11.23', '', '', '', '', '', '', ''), ('16630', 'TopHat-Fusion', 'KAT6A_ADAM2', 'KAT6A', 'chr8', '41905895', '-', 'ADAM2', 'chr8', '39624769', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15A-06A', '', '111', '', 'In-Frame', 'Intra-chr', '8p11.21', '8p11.22', '', '', '', '', 'Transcription_Factor', '', ''), ('16631', 'TopHat-Fusion', 'KAT6A_ADAM2', 'KAT6A', 'chr8', '41905895', '-', 'ADAM2', 'chr8', '39627093', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15A-06A', '', '111', '', 'Out-of-Frame', 'Intra-chr', '8p11.21', '8p11.22', '', '', '', '', 'Transcription_Factor', '', ''), ('16632', 'TopHat-Fusion', 'PILRA_PILRB', 'PILRA', 'chr7', '99972055', '+', 'PILRB', 'chr7', '99964715', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0SW-01A', '', '272', '', 'In-Frame', 'Intra-chr', '7q22.1', '7q22.1', '', '', '', '', '', '', ''), ('16633', 'TopHat-Fusion', 'PILRA_PILRB', 'PILRA', 'chr7', '99972055', '+', 'PILRB', 'chr7', '99964715', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A62Y-01A', '', '236', '', 'In-Frame', 'Intra-chr', '7q22.1', '7q22.1', '', '', '', '', '', '', ''), ('16634', 'TopHat-Fusion', 'ALDH3B2_ALDH3B1', 'ALDH3B2', 'chr11', '67434044', '-', 'ALDH3B1', 'chr11', '67786638', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0SW-01A', '', '694', '', 'Out-of-Frame', 'Intra-chr', '11q13.2', '11q13.2', '', '', '', '', '', '', ''), ('16635', 'TopHat-Fusion', 'ALDH3B2_ALDH3B1', 'ALDH3B2', 'chr11', '67434044', '-', 'ALDH3B1', 'chr11', '67786638', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15A-06A', '', '400', '', 'Out-of-Frame', 'Intra-chr', '11q13.2', '11q13.2', '', '', '', '', '', '', ''), ('16636', 'TopHat-Fusion', 'PTPRT_STK4', 'PTPRT', 'chr20', '41076859', '-', 'STK4', 'chr20', '43671079', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A106-01A', '', '382', '', 'Out-of-Frame', 'Intra-chr', '20q12', '20q13.12', 'Kinase', '', '', '', 'Transcription_Factor', '', ''), ('16637', 'TopHat-Fusion', 'PRRC2B_NUP214', 'PRRC2B', 'chr9', '134340464', '+', 'NUP214', 'chr9', '134050846', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A09N-01A', '', '162', '', 'In-Frame', 'Intra-chr', '9q34.13', '9q34.13', '', '', '', '', '', '', ''), ('16638', 'TopHat-Fusion', 'RPRD1A_ELP2', 'RPRD1A', 'chr18', '33580258', '-', 'ELP2', 'chr18', '33718388', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-GM-A2DB-01A', '', '153', '', 'Out-of-Frame', 'Intra-chr', '18q12.2', '18q12.2', '', '', '', '', '', '', ''), ('16639', 'TopHat-Fusion', 'RPRD1A_ELP2', 'RPRD1A', 'chr18', '33580258', '-', 'ELP2', 'chr18', '33726010', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-GM-A2DB-01A', '', '153', '', 'In-Frame', 'Intra-chr', '18q12.2', '18q12.2', '', '', '', '', '', '', ''), ('16640', 'TopHat-Fusion', 'TBCD_SLC9A3R1', 'TBCD', 'chr17', '80847572', '+', 'SLC9A3R1', 'chr17', '72758150', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A26G-01A', '', '126', '', 'In-Frame', 'Intra-chr', '17q25.3', '17q25.1', '', '', '', '', '', '', ''), ('16641', 'TopHat-Fusion', 'CHAF1A_CCDC94', 'CHAF1A', 'chr19', '4428886', '+', 'CCDC94', 'chr19', '4261990', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5D7-01A', '', '128', '', 'In-Frame', 'Intra-chr', '19p13.3', '19p13.3', '', '', '', '', '', '', ''), ('16642', 'TopHat-Fusion', 'EIF3A_GRK5', 'EIF3A', 'chr10', '120797912', '-', 'GRK5', 'chr10', '121060194', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5D7-01A', '', '286', '', 'In-Frame', 'Intra-chr', '10q26.11', '10q26.11', '', '', '', '', '', '', ''), ('16643', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A26G-01A', '', '822', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16644', 'TopHat-Fusion', 'LOC101929099_MAN1A2', 'LOC101929099', 'chr1', '117576481', '-', 'MAN1A2', 'chr1', '118009048', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5D7-01A', '', '115', '', 'Out-of-Frame', 'Intra-chr', '1p13.1', '1p12', '', '', '', '', '', '', ''), ('16645', 'TopHat-Fusion', 'CASC8_PVT1', 'CASC8', 'chr8', '128427132', '-', 'PVT1', 'chr8', '128806979', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A18T-01A', '', '222', '', 'Out-of-Frame', 'Intra-chr', '8q24.21', '8q24.21', '', '', '', '', '', '', ''), ('16646', 'TopHat-Fusion', 'DCAF6_MPZL1', 'DCAF6', 'chr1', '167974030', '+', 'MPZL1', 'chr1', '167734819', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A26G-01A', '', '154', '', 'In-Frame', 'Intra-chr', '1q24.2', '1q24.2', '', '', '', '', '', '', ''), ('16647', 'TopHat-Fusion', 'UBE2J2_GNB1', 'UBE2J2', 'chr1', '1203241', '-', 'GNB1', 'chr1', '1736019', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A18T-01A', '', '147', '', 'Out-of-Frame', 'Intra-chr', '1p36.33', '1p36.33', '', '', '', '', '', '', ''), ('16648', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A1KS-01A', '', '118', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('16649', 'TopHat-Fusion', 'ALDH3B2_ALDH3B1', 'ALDH3B2', 'chr11', '67434044', '-', 'ALDH3B1', 'chr11', '67786638', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0ER-01A', '', '181', '', 'Out-of-Frame', 'Intra-chr', '11q13.2', '11q13.2', '', '', '', '', '', '', ''), ('16650', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189873863', '-', 'COL1A1', 'chr17', '48263714', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1JE-01A', '', '106', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16651', 'TopHat-Fusion', 'PPARG_PEX5', 'PPARG', 'chr3', '12442160', '+', 'PEX5', 'chr12', '7354436', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A18T-01A', '', '121', '', 'Out-of-Frame', 'Inter-chr', '3p25.2', '12p13.31', '', '', '', '', '', '', ''), ('16652', 'TopHat-Fusion', 'PPARG_PEX5', 'PPARG', 'chr3', '12442160', '+', 'PEX5', 'chr12', '7355299', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A18T-01A', '', '121', '', 'In-Frame', 'Inter-chr', '3p25.2', '12p13.31', '', '', '', '', '', '', ''), ('16653', 'TopHat-Fusion', 'PSMD4_RIIAD1', 'PSMD4', 'chr1', '151234776', '+', 'RIIAD1', 'chr1', '151701869', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A18T-01A', '', '118', '', 'CDS-3\'UTR', 'Intra-chr', '1q21.3', '1q21.3', '', '', '', '', '', '', ''), ('16654', 'TopHat-Fusion', 'LRRFIP2_GOLGA4', 'LRRFIP2', 'chr3', '37170553', '-', 'GOLGA4', 'chr3', '37341837', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5D7-01A', '', '307', '', 'Out-of-Frame', 'Intra-chr', '3p22.2', '3p22.2', '', '', '', '', '', '', ''), ('16655', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677323', '+', 'IGLL5', 'chr22', '23235962', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A08X-01A', '', '4779', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16656', 'TopHat-Fusion', 'PALLD_NAA15', 'PALLD', 'chr4', '169589518', '+', 'NAA15', 'chr4', '140291364', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A04C-01A', '', '151', '', '', 'Intra-chr', '4q32.3', '4q31.1', '', '', '', '', '', '', ''), ('16657', 'TopHat-Fusion', 'PGAP3_STAC2', 'PGAP3', 'chr17', '37844086', '-', 'STAC2', 'chr17', '37373425', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A08X-01A', '', '320', '', 'In-Frame', 'Intra-chr', '17q12', '17q12', '', '', '', '', '', '', ''), ('16658', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0T3-01A', '', '120', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('16659', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0T6-01A', '', '110', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('16660', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189867764', '+', 'COL1A1', 'chr17', '48267088', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A22E-01A', '', '100', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16661', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94047863', '+', 'COL1A1', 'chr17', '48265961', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0T6-01A', '', '204', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('16662', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94047863', '+', 'COL1A1', 'chr17', '48265961', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A23E-01A', '', '121', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('16663', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94049586', '+', 'COL1A1', 'chr17', '48273890', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A23E-01A', '', '103', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('16664', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94052427', '+', 'COL1A1', 'chr17', '48266891', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A22E-01A', '', '174', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('16665', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94053754', '+', 'COL1A1', 'chr17', '48272460', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A23E-01A', '', '109', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('16666', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94053754', '+', 'COL1A1', 'chr17', '48272460', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A22E-01A', '', '155', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('16667', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48273303', '-', 'COL1A2', 'chr7', '94043531', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0T6-01A', '', '171', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16668', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48273303', '-', 'COL1A2', 'chr7', '94043531', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A23E-01A', '', '104', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16669', 'TopHat-Fusion', 'AP2B1_TOP2A', 'AP2B1', 'chr17', '34001339', '+', 'TOP2A', 'chr17', '38567244', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A08X-01A', '', '152', '', 'Out-of-Frame', 'Intra-chr', '17q12', '17q21.2', '', '', '', '', '', '', ''), ('16670', 'TopHat-Fusion', 'OPCML_NTM', 'OPCML', 'chr11', '132812820', '-', 'NTM', 'chr11', '132016175', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A23E-01A', '', '110', '', 'In-Frame', 'Intra-chr', '11q25', '11q25', '', '', '', '', '', '', ''), ('16671', 'TopHat-Fusion', 'SLFN11_MIEN1', 'SLFN11', 'chr17', '33700492', '-', 'MIEN1', 'chr17', '37886543', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A08X-01A', '', '148', '', '5\'UTR-CDS', 'Intra-chr', '17q12', '17q12', '', '', '', '', '', '', ''), ('16672', 'TopHat-Fusion', 'HCG17_HLA-C', 'HCG17', 'chr6', '30228110', '-', 'HLA-C', 'chr6', '31239375', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0T6-01A', '', '220', '', 'Out-of-Frame', 'Intra-chr', '6p22.1', '6p21.33', '', '', '', '', '', '', ''), ('16673', 'TopHat-Fusion', 'TDRD12_CEP89', 'TDRD12', 'chr19', '33262030', '+', 'CEP89', 'chr19', '33414344', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0T3-01A', '', '110', '', 'In-Frame', 'Intra-chr', '19q13.11', '19q13.11', '', '', '', '', '', '', ''), ('16674', 'TopHat-Fusion', 'FAM129B_OLFM1', 'FAM129B', 'chr9', '130331098', '-', 'OLFM1', 'chr9', '137982040', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A08X-01A', '', '108', '', 'In-Frame', 'Intra-chr', '9q34.11', '9q34.3', '', '', '', '', '', '', ''), ('16675', 'TopHat-Fusion', 'C11orf49_ASNA1', 'C11orf49', 'chr11', '47063161', '+', 'ASNA1', 'chr19', '12856311', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A5QP-01A', '', '149', '', 'In-Frame', 'Inter-chr', '11p11.2', '19p13.2', '', '', '', '', '', '', ''), ('16676', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677319', '+', 'IGLL5', 'chr22', '23235958', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-5L-AAT1-01A', '', '223', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16677', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A26F-01A', '', '158', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16678', 'TopHat-Fusion', 'PPP1R1B_ERBB2', 'PPP1R1B', 'chr17', '37783927', '+', 'ERBB2', 'chr17', '37879912', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-UL-AAZ6-01A', '', '404', '', 'In-Frame', 'Intra-chr', '17q12', '17q12', '', '', '', '', '', '', ''), ('16679', 'TopHat-Fusion', 'PPP1R1B_ERBB2', 'PPP1R1B', 'chr17', '37783962', '+', 'ERBB2', 'chr17', '37879912', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-UL-AAZ6-01A', '', '404', '', 'Out-of-Frame', 'Intra-chr', '17q12', '17q12', '', '', '', '', '', '', ''), ('16680', 'TopHat-Fusion', 'ADAM2_MAVS', 'ADAM2', 'chr8', '39626883', '-', 'MAVS', 'chr20', '3835387', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A256-01A', '', '127', '', 'In-Frame', 'Inter-chr', '8p11.22', '20p13', '', '', '', '', '', '', ''), ('16681', 'TopHat-Fusion', 'ADAM2_MAVS', 'ADAM2', 'chr8', '39626949', '-', 'MAVS', 'chr20', '3835387', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A256-01A', '', '127', '', 'Out-of-Frame', 'Inter-chr', '8p11.22', '20p13', '', '', '', '', '', '', ''), ('16682', 'TopHat-Fusion', 'MYRF_FADS2', 'MYRF', 'chr11', '61554279', '-', 'FADS2', 'chr11', '61621102', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A256-01A', '', '153', '', 'Out-of-Frame', 'Intra-chr', '11q12.2', '11q12.2', '', '', '', '', '', '', ''), ('16683', 'TopHat-Fusion', 'MYCBP2_NDFIP2', 'MYCBP2', 'chr13', '77641767', '-', 'NDFIP2', 'chr13', '80113909', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XK-01A', '', '123', '', 'Out-of-Frame', 'Intra-chr', '13q22.3', '13q31.1', '', '', '', '', '', '', ''), ('16684', 'TopHat-Fusion', 'MYCBP2_NDFIP2', 'MYCBP2', 'chr13', '77649652', '-', 'NDFIP2', 'chr13', '80113909', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XK-01A', '', '116', '', 'Out-of-Frame', 'Intra-chr', '13q22.3', '13q31.1', '', '', '', '', '', '', ''), ('16685', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XK-01A', '', '167', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16686', 'TopHat-Fusion', 'CASC21_CASC8', 'CASC21', 'chr8', '128302304', '+', 'CASC8', 'chr8', '128433073', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A256-01A', '', '1284', '', 'Out-of-Frame', 'Intra-chr', '8q24.21', '8q24.21', '', '', '', '', '', '', ''), ('16687', 'TopHat-Fusion', 'C17orf64_PLCG1-AS1', 'C17orf64', 'chr17', '58503143', '-', 'PLCG1-AS1', 'chr20', '39729992', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A273-01A', '', '219', '', 'CDS-5\'UTR', 'Inter-chr', '17q23.2', '20q12', '', '', '', '', '', '', ''), ('16688', 'TopHat-Fusion', 'BCAT1_GYG2', 'BCAT1', 'chr12', '24983722', '+', 'GYG2', 'chrX', '2799092', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0DG-01A', '', '129', '', 'Out-of-Frame', 'Inter-chr', '12p12.1', 'Xp22.33', '', '', '', '', '', '', ''), ('16689', 'TopHat-Fusion', 'ITGB6_RBMS1', 'ITGB6', 'chr2', '161030484', '-', 'RBMS1', 'chr2', '161159997', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XK-01A', '', '166', '', 'In-Frame', 'Intra-chr', '2q24.2', '2q24.2', '', '', '', '', '', '', ''), ('16690', 'TopHat-Fusion', 'EIF2S2_DEFB123', 'EIF2S2', 'chr20', '32699901', '-', 'DEFB123', 'chr20', '30037831', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A273-01A', '', '311', '', 'Out-of-Frame', 'Intra-chr', '20q11.22', '20q11.21', '', '', '', '', '', '', ''), ('16691', 'TopHat-Fusion', 'DDB1_TMEM258', 'DDB1', 'chr11', '61076454', '-', 'TMEM258', 'chr11', '61556706', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A256-01A', '', '181', '', 'Out-of-Frame', 'Intra-chr', '11q12.2', '11q12.2', '', '', '', '', '', '', ''), ('16692', 'TopHat-Fusion', 'WDR12_ASB7', 'WDR12', 'chr2', '203747458', '+', 'ASB7', 'chr15', '101185681', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A256-01A', '', '199', '', 'Out-of-Frame', 'Inter-chr', '2q33.2', '15q26.3', '', '', '', '', '', '', ''), ('16693', 'TopHat-Fusion', 'SEC61A2_MAPK14', 'SEC61A2', 'chr10', '12209809', '+', 'MAPK14', 'chr6', '36059929', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A256-01A', '', '108', '', 'In-Frame', 'Inter-chr', '10p13', '6p21.31', '', '', '', '', '', '', ''), ('16694', 'TopHat-Fusion', 'PILRA_PILRB', 'PILRA', 'chr7', '99972055', '+', 'PILRB', 'chr7', '99964715', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0BR-01A', '', '136', '', 'In-Frame', 'Intra-chr', '7q22.1', '7q22.1', '', '', '', '', '', '', ''), ('16695', 'TopHat-Fusion', 'PILRA_PILRB', 'PILRA', 'chr7', '99972055', '+', 'PILRB', 'chr7', '99964715', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0DG-01A', '', '191', '', 'In-Frame', 'Intra-chr', '7q22.1', '7q22.1', '', '', '', '', '', '', ''), ('16696', 'TopHat-Fusion', 'ITGB5_WAC-AS1', 'ITGB5', 'chr3', '124560229', '-', 'WAC-AS1', 'chr10', '28814936', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A09X-01A', '', '110', '', 'CDS-5\'UTR', 'Inter-chr', '3q21.2', '10p12.1', '', '', '', '', '', '', ''), ('16697', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0RT-01A', '', '1075', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16698', 'TopHat-Fusion', 'FGF10_BRCAT54', 'FGF10', 'chr5', '44388459', '-', 'BRCAT54', 'chr5', '44745509', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24L-01A', '', '1704', '', 'Out-of-Frame', 'Intra-chr', '5p12', '5p12', '', '', '', '', '', '', ''), ('16699', 'TopHat-Fusion', 'FGF10_BRCAT54', 'FGF10', 'chr5', '44388459', '-', 'BRCAT54', 'chr5', '44746139', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24L-01A', '', '1704', '', 'Out-of-Frame', 'Intra-chr', '5p12', '5p12', '', '', '', '', '', '', ''), ('16700', 'TopHat-Fusion', 'FGF10-AS1_BRCAT54', 'FGF10-AS1', 'chr5', '44395338', '-', 'BRCAT54', 'chr5', '44762259', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24L-01A', '', '169', '', 'Out-of-Frame', 'Intra-chr', '5p12', '5p12', '', '', '', '', '', '', ''), ('16701', 'TopHat-Fusion', 'FGF10-AS1_BRCAT54', 'FGF10-AS1', 'chr5', '44395338', '-', 'BRCAT54', 'chr5', '44762263', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24L-01A', '', '169', '', 'Out-of-Frame', 'Intra-chr', '5p12', '5p12', '', '', '', '', '', '', ''), ('16702', 'TopHat-Fusion', 'BCL2_GRIK5', 'BCL2', 'chr18', '60924775', '-', 'GRIK5', 'chr19', '42563500', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15E-06A', '', '330', '', 'Out-of-Frame', 'Inter-chr', '18q21.33', '19q13.2', '', '', '', '', 'Transcription_Factor', '', ''), ('16703', 'TopHat-Fusion', 'ETFB_LIM2', 'ETFB', 'chr19', '51857403', '-', 'LIM2', 'chr19', '51883892', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0RT-01A', '', '101', '', 'Out-of-Frame', 'Intra-chr', '19q13.41', '19q13.41', '', '', '', '', '', '', ''), ('16704', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A27V-01A', '', '101', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16705', 'TopHat-Fusion', 'SEMA4C_FAM178B', 'SEMA4C', 'chr2', '97530721', '-', 'FAM178B', 'chr2', '97559185', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14R-01A', '', '1896', '', 'Out-of-Frame', 'Intra-chr', '2q11.2', '2q11.2', '', '', '', '', '', '', ''), ('16706', 'TopHat-Fusion', 'SEMA4C_FAM178B', 'SEMA4C', 'chr2', '97530730', '-', 'FAM178B', 'chr2', '97544229', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14R-01A', '', '316', '', 'In-Frame', 'Intra-chr', '2q11.2', '2q11.2', '', '', '', '', '', '', ''), ('16707', 'TopHat-Fusion', 'ICMT_CAMTA1', 'ICMT', 'chr1', '6291961', '-', 'CAMTA1', 'chr1', '7252436', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0BZ-01A', '', '106', '', 'Out-of-Frame', 'Intra-chr', '1p36.31', '1p36.23', '', '', '', '', '', '', ''), ('16708', 'TopHat-Fusion', 'HCG17_HLA-C', 'HCG17', 'chr6', '30228110', '-', 'HLA-C', 'chr6', '31239375', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A8FY-01A', '', '186', '', 'Out-of-Frame', 'Intra-chr', '6p22.1', '6p21.33', '', '', '', '', '', '', ''), ('16709', 'TopHat-Fusion', 'RARA_SKAP1', 'RARA', 'chr17', '38487647', '+', 'SKAP1', 'chr17', '46214698', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IN-01A', '', '283', '', 'Out-of-Frame', 'Intra-chr', '17q21.2', '17q21.32', '', '', '', '', '', '', ''), ('16710', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A1FC-01A', '', '1423', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16711', 'TopHat-Fusion', 'PTBP2_KAZN', 'PTBP2', 'chr1', '97189149', '+', 'KAZN', 'chr1', '15361244', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A1FC-01A', '', '105', '', 'Out-of-Frame', 'Intra-chr', '1p21.3', '1p36.21', '', '', '', '', '', '', ''), ('16712', 'TopHat-Fusion', 'RNF11_TMEM61', 'RNF11', 'chr1', '51702550', '+', 'TMEM61', 'chr1', '55457508', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A1FC-01A', '', '126', '', 'Out-of-Frame', 'Intra-chr', '1p32.3', '1p32.3', '', '', '', '', '', '', ''), ('16713', 'TopHat-Fusion', 'GTF2I_GTF2IRD1', 'GTF2I', 'chr7', '74120763', '+', 'GTF2IRD1', 'chr7', '74009340', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A1FC-01A', '', '179', '', 'Out-of-Frame', 'Intra-chr', '7q11.23', '7q11.23', '', '', '', '', '', '', ''), ('16714', 'TopHat-Fusion', 'SLC39A3_PLPP2', 'SLC39A3', 'chr19', '2737045', '-', 'PLPP2', 'chr19', '288170', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A13E-01A', '', '118', '', 'Out-of-Frame', 'Intra-chr', '19p13.3', '19p13.3', '', '', '', '', '', '', ''), ('16715', 'TopHat-Fusion', 'INSR_PRKCSH', 'INSR', 'chr19', '7171405', '-', 'PRKCSH', 'chr19', '11552171', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12L-01A', '', '164', '', 'Out-of-Frame', 'Intra-chr', '19p13.2', '19p13.2', 'Kinase', '', '', '', '', '', ''), ('16716', 'TopHat-Fusion', 'INSR_PRKCSH', 'INSR', 'chr19', '7174537', '-', 'PRKCSH', 'chr19', '11552171', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12L-01A', '', '165', '', 'Out-of-Frame', 'Intra-chr', '19p13.2', '19p13.2', 'Kinase', '', '', '', '', '', ''), ('16717', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189856953', '+', 'COL1A1', 'chr17', '48266880', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A1-A0SH-01A', '', '262', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16718', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189861943', '+', 'COL1A1', 'chr17', '48275118', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A1-A0SH-01A', '', '325', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16719', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189864094', '+', 'COL1A1', 'chr17', '48266885', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-LL-A440-01A', '', '163', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16720', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189868187', '+', 'COL1A1', 'chr17', '48272674', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A1-A0SH-01A', '', '509', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16721', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189868187', '+', 'COL1A1', 'chr17', '48272674', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-LL-A440-01A', '', '164', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16722', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189871679', '+', 'COL1A1', 'chr17', '48270053', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-LL-A440-01A', '', '148', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16723', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189871709', '+', 'COL1A1', 'chr17', '48272959', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-LL-A440-01A', '', '140', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16724', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189871715', '+', 'COL1A1', 'chr17', '48264897', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-LL-A440-01A', '', '144', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16725', 'TopHat-Fusion', 'CLU_COL1A1', 'CLU', 'chr8', '27462579', '+', 'COL1A1', 'chr17', '48266613', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A1-A0SH-01A', '', '100', '', 'Out-of-Frame', 'Inter-chr', '8p21.1', '17q21.33', '', '', '', '', '', '', ''), ('16726', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48265892', '-', 'COL1A2', 'chr7', '94038658', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A1-A0SH-01A', '', '398', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16727', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48265892', '-', 'COL1A2', 'chr7', '94038658', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1NG-01A', '', '167', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16728', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48273303', '-', 'COL1A2', 'chr7', '94043531', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A1-A0SH-01A', '', '678', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16729', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48273303', '-', 'COL1A2', 'chr7', '94043531', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1NG-01A', '', '225', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16730', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48273303', '-', 'COL1A2', 'chr7', '94043531', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-LL-A440-01A', '', '147', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16731', 'TopHat-Fusion', 'OPCML_NTM', 'OPCML', 'chr11', '132812824', '-', 'NTM', 'chr11', '132016171', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1NG-01A', '', '150', '', 'Out-of-Frame', 'Intra-chr', '11q25', '11q25', '', '', '', '', '', '', ''), ('16732', 'TopHat-Fusion', 'TMEM14C_PAK1IP1', 'TMEM14C', 'chr6', '10725269', '+', 'PAK1IP1', 'chr6', '10709185', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A3U0-01A', '', '100', '', 'Out-of-Frame', 'Intra-chr', '6p24.2', '6p24.2', '', '', '', '', '', '', ''), ('16733', 'TopHat-Fusion', 'FZR1_MFSD12', 'FZR1', 'chr19', '3524189', '-', 'MFSD12', 'chr19', '3545107', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12L-01A', '', '105', '', 'Out-of-Frame', 'Intra-chr', '19p13.3', '19p13.3', '', '', '', '', '', '', ''), ('16734', 'TopHat-Fusion', 'FZR1_MFSD12', 'FZR1', 'chr19', '3524571', '-', 'MFSD12', 'chr19', '3544936', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12L-01A', '', '105', '', 'Out-of-Frame', 'Intra-chr', '19p13.3', '19p13.3', '', '', '', '', '', '', ''), ('16735', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94029587', '+', 'COL1A1', 'chr17', '48266898', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A1-A0SH-01A', '', '170', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('16736', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94035614', '+', 'COL1A1', 'chr17', '48272460', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1NG-01A', '', '143', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('16737', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94049586', '+', 'COL1A1', 'chr17', '48273890', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-LL-A440-01A', '', '160', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('16738', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94049753', '+', 'COL1A1', 'chr17', '48265963', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-LL-A440-01A', '', '178', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('16739', 'TopHat-Fusion', 'COL1A1_COL3A1', 'COL1A1', 'chr17', '48266781', '-', 'COL3A1', 'chr2', '189864058', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-LL-A440-01A', '', '175', '', 'In-Frame', 'Inter-chr', '17q21.33', '2q32.2', '', '', '', '', '', '', ''), ('16740', 'TopHat-Fusion', 'CPT1A_CHKA', 'CPT1A', 'chr11', '68529002', '-', 'CHKA', 'chr11', '67821513', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A08G-01A', '', '343', '', 'In-Frame', 'Intra-chr', '11q13.3', '11q13.2', 'Kinase', '', '', '', '', '', ''), ('16741', 'TopHat-Fusion', 'SLC39A11_ITGB4', 'SLC39A11', 'chr17', '71073900', '-', 'ITGB4', 'chr17', '73727288', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A23H-01A', '', '728', '', 'Out-of-Frame', 'Intra-chr', '17q25.1', '17q25.1', '', '', '', '', '', '', ''), ('16742', 'TopHat-Fusion', 'CDK6_VPS50', 'CDK6', 'chr7', '92295395', '-', 'VPS50', 'chr7', '92869246', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A134-01A', '', '117', '', 'Out-of-Frame', 'Intra-chr', '7q21.2', '7q21.3', '', '', '', '', '', '', ''), ('16743', 'TopHat-Fusion', 'CKAP5_VMP1', 'CKAP5', 'chr11', '46780472', '-', 'VMP1', 'chr17', '57842331', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A23H-01A', '', '105', '', 'In-Frame', 'Inter-chr', '11p11.2', '17q23.1', '', '', '', '', '', '', ''), ('16744', 'TopHat-Fusion', 'TFG_ADGRG7', 'TFG', 'chr3', '100438901', '+', 'ADGRG7', 'chr3', '100348441', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1JT-01A', '', '246', '', 'Out-of-Frame', 'Intra-chr', '3q12.2', '3q12.2', '', '', '', '', '', '', ''), ('16745', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A3XS-01A', '', '105', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('16746', 'TopHat-Fusion', 'KANSL1_ORMDL3', 'KANSL1', 'chr17', '44144914', '-', 'ORMDL3', 'chr17', '38080472', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A23H-01A', '', '197', '', 'CDS-5\'UTR', 'Intra-chr', '17q21.31', '17q12', '', '', '', '', '', '', ''), ('16747', 'TopHat-Fusion', 'KANSL1_ORMDL3', 'KANSL1', 'chr17', '44144914', '-', 'ORMDL3', 'chr17', '38080477', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A23H-01A', '', '197', '', 'CDS-5\'UTR', 'Intra-chr', '17q21.31', '17q12', '', '', '', '', '', '', ''), ('16748', 'TopHat-Fusion', 'DUSP8_DENND5A', 'DUSP8', 'chr11', '1585546', '-', 'DENND5A', 'chr11', '9199478', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A08G-01A', '', '239', '', 'Out-of-Frame', 'Intra-chr', '11p15.5', '11p15.4', '', '', '', '', '', '', ''), ('16749', 'TopHat-Fusion', 'MCUR1_S100A10', 'MCUR1', 'chr6', '13800572', '-', 'S100A10', 'chr1', '151958726', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A3QA-01A', '', '123', '', 'Out-of-Frame', 'Inter-chr', '6p23', '1q21.3', '', '', '', '', '', '', ''), ('16750', 'TopHat-Fusion', 'IPO7_RENBP', 'IPO7', 'chr11', '9430185', '+', 'RENBP', 'chrX', '153201028', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A08G-01A', '', '103', '', 'Out-of-Frame', 'Inter-chr', '11p15.4', 'Xq28', '', '', '', '', '', '', ''), ('16751', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0RG-01A', '', '201', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16752', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A18V-11A', '', '133', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16753', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A134-01A', '', '242', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16754', 'TopHat-Fusion', 'PILRA_PILRB', 'PILRA', 'chr7', '99972055', '+', 'PILRB', 'chr7', '99964715', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A08G-01A', '', '416', '', 'In-Frame', 'Intra-chr', '7q22.1', '7q22.1', '', '', '', '', '', '', ''), ('16755', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A08G-01A', '', '141', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('16756', 'TopHat-Fusion', 'RANBP10_RRP15', 'RANBP10', 'chr16', '67839330', '-', 'RRP15', 'chr1', '218504289', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A109-01A', '', '224', '', 'Out-of-Frame', 'Inter-chr', '16q22.1', '1q41', '', '', '', '', '', '', ''), ('16757', 'TopHat-Fusion', 'KDM2A_MAP3K3', 'KDM2A', 'chr11', '66999430', '+', 'MAP3K3', 'chr17', '61757470', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A1-A0SN-01A', '', '534', '', 'In-Frame', 'Inter-chr', '11q13.2', '17q23.3', 'Kinase', '', '', '', '', '', ''), ('16758', 'TopHat-Fusion', 'KDM2A_MAP3K3', 'KDM2A', 'chr11', '66999430', '+', 'MAP3K3', 'chr17', '61759125', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A1-A0SN-01A', '', '534', '', 'Out-of-Frame', 'Inter-chr', '11q13.2', '17q23.3', 'Kinase', '', '', '', '', '', ''), ('16759', 'TopHat-Fusion', 'TBC1D23_CMSS1', 'TBC1D23', 'chr3', '100002654', '+', 'CMSS1', 'chr3', '99890682', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A129-01A', '', '200', '', 'Out-of-Frame', 'Intra-chr', '3q12.2', '3q12.1', '', '', '', '', '', '', ''), ('16760', 'TopHat-Fusion', 'TRPS1_LINC00536', 'TRPS1', 'chr8', '116599227', '-', 'LINC00536', 'chr8', '117142504', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A140-01A', '', '129', '', 'CDS-3\'UTR', 'Intra-chr', '8q23.3', '8q23.3', '', '', '', '', '', '', ''), ('16761', 'TopHat-Fusion', 'TUBD1_CDK12', 'TUBD1', 'chr17', '57943969', '-', 'CDK12', 'chr17', '37667781', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A1-A0SN-01A', '', '110', '', 'In-Frame', 'Intra-chr', '17q23.1', '17q12', 'Kinase', '', '', '', '', '', ''), ('16762', 'TopHat-Fusion', 'TUBD1_CDK12', 'TUBD1', 'chr17', '57951899', '-', 'CDK12', 'chr17', '37667781', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A1-A0SN-01A', '', '131', '', 'Out-of-Frame', 'Intra-chr', '17q23.1', '17q12', 'Kinase', '', '', '', '', '', ''), ('16763', 'TopHat-Fusion', 'NCAPH2_TYMP', 'NCAPH2', 'chr22', '50960739', '-', 'TYMP', 'chr22', '50965112', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A129-01A', '', '157', '', 'Out-of-Frame', 'Intra-chr', '22q13.33', '22q13.33', '', '', '', '', '', '', ''), ('16764', 'TopHat-Fusion', 'NCAPH2_TYMP', 'NCAPH2', 'chr22', '50960771', '-', 'TYMP', 'chr22', '50964565', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A129-01A', '', '157', '', 'Out-of-Frame', 'Intra-chr', '22q13.33', '22q13.33', '', '', '', '', '', '', ''), ('16765', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A254-01A', '', '100', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16766', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A1FR-11B', '', '213', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16767', 'TopHat-Fusion', 'ERBB2_SLC29A3', 'ERBB2', 'chr17', '37883255', '+', 'SLC29A3', 'chr10', '73121710', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A254-01A', '', '1078', '', 'Out-of-Frame', 'Inter-chr', '17q12', '10q22.1', 'Kinase', '', '', '', '', '', ''), ('16768', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A129-01A', '', '120', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('16769', 'TopHat-Fusion', 'DDX42_RPS6KB1', 'DDX42', 'chr17', '61882534', '+', 'RPS6KB1', 'chr17', '57987922', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A1-A0SN-01A', '', '105', '', 'In-Frame', 'Intra-chr', '17q23.3', '17q23.1', '', '', '', '', '', '', ''), ('16770', 'TopHat-Fusion', 'DDX42_RPS6KB1', 'DDX42', 'chr17', '61882815', '+', 'RPS6KB1', 'chr17', '57989481', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A1-A0SN-01A', '', '105', '', 'Out-of-Frame', 'Intra-chr', '17q23.3', '17q23.1', '', '', '', '', '', '', ''), ('16771', 'TopHat-Fusion', 'LINC01111_MTDH', 'LINC01111', 'chr8', '77396309', '+', 'MTDH', 'chr8', '98657114', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A109-01A', '', '136', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q22.1', '', '', '', '', '', '', ''), ('16772', 'TopHat-Fusion', 'FBXL20_SOCS7', 'FBXL20', 'chr17', '37557613', '-', 'SOCS7', 'chr17', '36551561', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A254-01A', '', '111', '', 'Out-of-Frame', 'Intra-chr', '17q12', '17q12', '', '', '', '', '', '', ''), ('16773', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B3-01A', '', '246', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16774', 'TopHat-Fusion', 'HCG17_HLA-C', 'HCG17', 'chr6', '30228110', '-', 'HLA-C', 'chr6', '31239375', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A129-01A', '', '111', '', 'Out-of-Frame', 'Intra-chr', '6p22.1', '6p21.33', '', '', '', '', '', '', ''), ('16775', 'TopHat-Fusion', 'HCG17_HLA-C', 'HCG17', 'chr6', '30228110', '-', 'HLA-C', 'chr6', '31239375', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0W7-01A', '', '185', '', 'Out-of-Frame', 'Intra-chr', '6p22.1', '6p21.33', '', '', '', '', '', '', ''), ('16776', 'TopHat-Fusion', 'CPSF4_SARNP', 'CPSF4', 'chr7', '99040869', '-', 'SARNP', 'chr12', '56194367', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A6R8-01A', '', '127', '', 'Out-of-Frame', 'Inter-chr', '7q22.1', '12q13.2', '', '', '', '', '', '', ''), ('16777', 'TopHat-Fusion', 'ACTN4_FTO', 'ACTN4', 'chr19', '39138546', '+', 'FTO', 'chr16', '53844051', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A150-01A', '', '177', '', 'In-Frame', 'Inter-chr', '19q13.2', '16q12.2', '', '', '', '', 'Transcription_Factor', '', ''), ('16778', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1NE-01A', '', '319', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16779', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677323', '+', 'IGLL5', 'chr22', '23235959', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-GM-A3XL-01A', '', '749', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16780', 'TopHat-Fusion', 'CANX_LINC01082', 'CANX', 'chr5', '179147560', '+', 'LINC01082', 'chr16', '86233117', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-UU-A93S-01A', '', '765', '', 'Out-of-Frame', 'Inter-chr', '5q35.3', '16q24.1', '', '', '', '', '', '', ''), ('16781', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189864108', '+', 'COL1A1', 'chr17', '48266635', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1IO-01A', '', '128', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16782', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189868187', '+', 'COL1A1', 'chr17', '48272674', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1IO-01A', '', '133', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16783', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189871715', '+', 'COL1A1', 'chr17', '48264897', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1IO-01A', '', '113', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16784', 'TopHat-Fusion', 'SHROOM3_GRSF1', 'SHROOM3', 'chr4', '77507621', '+', 'GRSF1', 'chr4', '71702030', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1IO-01A', '', '109', '', 'Out-of-Frame', 'Intra-chr', '4q21.1', '4q13.3', '', '', '', '', '', '', ''), ('16785', 'TopHat-Fusion', 'COL1A1_COL3A1', 'COL1A1', 'chr17', '48269148', '-', 'COL3A1', 'chr2', '189863408', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1IO-01A', '', '128', '', 'In-Frame', 'Inter-chr', '17q21.33', '2q32.2', '', '', '', '', '', '', ''), ('16786', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48265892', '-', 'COL1A2', 'chr7', '94038658', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1IO-01A', '', '108', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16787', 'TopHat-Fusion', 'MBTPS1_ATP2C2', 'MBTPS1', 'chr16', '84095212', '-', 'ATP2C2', 'chr16', '84433347', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-GM-A3XL-01A', '', '165', '', 'Out-of-Frame', 'Intra-chr', '16q23.3', '16q24.1', '', '', '', '', '', '', ''), ('16788', 'TopHat-Fusion', 'SVIL-AS1_SVILP1', 'SVIL-AS1', 'chr10', '29752420', '-', 'SVILP1', 'chr10', '31001486', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A0FS-01A', '', '414', '', 'Out-of-Frame', 'Intra-chr', '10p11.23', '10p11.23', '', '', '', '', '', '', ''), ('16789', 'TopHat-Fusion', 'SPIDR_NSFL1C', 'SPIDR', 'chr8', '48424444', '+', 'NSFL1C', 'chr20', '1435753', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-Z7-A8R5-01A', '', '147', '', 'Out-of-Frame', 'Inter-chr', '8q11.21', '20p13', '', '', '', '', '', '', ''), ('16790', 'TopHat-Fusion', 'DFNB31_SERF2', 'DFNB31', 'chr9', '117253950', '-', 'SERF2', 'chr15', '44085934', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12X-01A', '', '148', '', 'Out-of-Frame', 'Inter-chr', '9q32', '15q15.3', '', '', '', '', '', '', ''), ('16791', 'TopHat-Fusion', 'EFHD1_EIF4E2', 'EFHD1', 'chr2', '233537152', '+', 'EIF4E2', 'chr2', '233428956', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A0JE-01A', '', '473', '', 'In-Frame', 'Intra-chr', '2q37.1', '2q37.1', '', '', '', '', '', '', ''), ('16792', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A13Z-01A', '', '204', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16793', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A03Y-01A', '', '147', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('16794', 'TopHat-Fusion', 'PDE10A_POLB', 'PDE10A', 'chr6', '165989899', '-', 'POLB', 'chr8', '42229080', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A13Z-01A', '', '133', '', 'In-Frame', 'Inter-chr', '6q27', '8p11.21', '', '', '', '', '', '', ''), ('16795', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48267687', '-', 'COL1A2', 'chr7', '94049852', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A06P-01A', '', '120', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16796', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48270000', '-', 'COL1A2', 'chr7', '94052286', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1R3-01A', '', '225', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16797', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48273303', '-', 'COL1A2', 'chr7', '94043531', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A0JE-01A', '', '138', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16798', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48273303', '-', 'COL1A2', 'chr7', '94043531', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1R3-01A', '', '131', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16799', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189864108', '+', 'COL1A1', 'chr17', '48266635', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1R3-01A', '', '107', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16800', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189868187', '+', 'COL1A1', 'chr17', '48272674', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1R3-01A', '', '102', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16801', 'TopHat-Fusion', 'MFF_PDE6A', 'MFF', 'chr2', '228212099', '+', 'PDE6A', 'chr5', '149311876', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A26E-01A', '', '125', '', 'Out-of-Frame', 'Inter-chr', '2q36.3', '5q32', '', '', '', '', '', '', ''), ('16802', 'TopHat-Fusion', 'RPS4Y2_RPS4Y1', 'RPS4Y2', 'chrY', '22930861', '+', 'RPS4Y1', 'chrY', '2733128', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A1KQ-01A', '', '111', '', 'CDS-5\'UTR', 'Intra-chr', 'Yq11.223', 'Yp11.31', '', '', '', '', '', '', ''), ('16803', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A06P-01A', '', '149', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16804', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A13Z-01A', '', '105', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('16805', 'TopHat-Fusion', 'RBM12_ERCC6-PGBD3', 'RBM12', 'chr20', '34252681', '-', 'ERCC6-PGBD3', 'chr10', '50732822', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A2KD-01A', '', '291', '', '5\'UTR-CDS', 'Inter-chr', '20q11.22', '10q11.23', '', '', '', '', '', '', ''), ('16806', 'TopHat-Fusion', 'RBM12_ERCC6-PGBD3', 'RBM12', 'chr20', '34252723', '-', 'ERCC6-PGBD3', 'chr10', '50732822', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A2KD-01A', '', '291', '', '5\'UTR-CDS', 'Inter-chr', '20q11.22', '10q11.23', '', '', '', '', '', '', ''), ('16807', 'TopHat-Fusion', 'ASAH1_IKBKB', 'ASAH1', 'chr8', '17940582', '-', 'IKBKB', 'chr8', '42147790', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A2KD-01A', '', '111', '', 'In-Frame', 'Intra-chr', '8p22', '8p11.21', '', '', '', '', '', '', ''), ('16808', 'TopHat-Fusion', 'ASAH1_IKBKB', 'ASAH1', 'chr8', '17941489', '-', 'IKBKB', 'chr8', '42144850', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A2KD-01A', '', '111', '', 'In-Frame', 'Intra-chr', '8p22', '8p11.21', '', '', '', '', '', '', ''), ('16809', 'TopHat-Fusion', 'GSE1_METTL23', 'GSE1', 'chr16', '85647003', '+', 'METTL23', 'chr17', '74729059', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A2KD-01A', '', '277', '', 'Out-of-Frame', 'Inter-chr', '16q24.1', '17q25.1', '', '', '', '', '', '', ''), ('16810', 'TopHat-Fusion', 'GSE1_METTL23', 'GSE1', 'chr16', '85647003', '+', 'METTL23', 'chr17', '74729374', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A2KD-01A', '', '277', '', 'Out-of-Frame', 'Inter-chr', '16q24.1', '17q25.1', '', '', '', '', '', '', ''), ('16811', 'TopHat-Fusion', 'ZNF136_RNASEH2A', 'ZNF136', 'chr19', '12274020', '+', 'RNASEH2A', 'chr19', '12917821', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A2KD-01A', '', '181', '', 'Out-of-Frame', 'Intra-chr', '19p13.2', '19p13.2', '', '', '', '', '', '', ''), ('16812', 'TopHat-Fusion', 'PILRA_PILRB', 'PILRA', 'chr7', '99972055', '+', 'PILRB', 'chr7', '99964715', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A1-A0SM-01A', '', '165', '', 'In-Frame', 'Intra-chr', '7q22.1', '7q22.1', '', '', '', '', '', '', ''), ('16813', 'TopHat-Fusion', 'PILRA_PILRB', 'PILRA', 'chr7', '99972055', '+', 'PILRB', 'chr7', '99964715', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A6IV-01A', '', '297', '', 'In-Frame', 'Intra-chr', '7q22.1', '7q22.1', '', '', '', '', '', '', ''), ('16814', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A27K-01A', '', '156', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16815', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677324', '+', 'IGLL5', 'chr22', '23235963', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A0TS-01A', '', '1181', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16816', 'TopHat-Fusion', 'CASP3_PRIMPOL', 'CASP3', 'chr4', '185559554', '-', 'PRIMPOL', 'chr4', '185587980', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A27R-01A', '', '169', '', 'Out-of-Frame', 'Intra-chr', '4q35.1', '4q35.1', '', '', '', '', '', '', ''), ('16817', 'TopHat-Fusion', 'ITSN2_NCOA1', 'ITSN2', 'chr2', '24535080', '-', 'NCOA1', 'chr2', '24914571', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A26Y-01A', '', '105', '', 'Out-of-Frame', 'Intra-chr', '2p23.3', '2p23.3', '', '', '', '', '', '', ''), ('16818', 'TopHat-Fusion', 'CD9_LOC100505666', 'CD9', 'chr12', '6333383', '+', 'LOC100505666', 'chr1', '155030204', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0RE-01A', '', '108', '', 'CDS-5\'UTR', 'Inter-chr', '12p13.31', '1q22', '', '', '', '', '', '', ''), ('16819', 'TopHat-Fusion', 'ITGA3_BCAS3', 'ITGA3', 'chr17', '48148293', '+', 'BCAS3', 'chr17', '58980011', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A250-01A', '', '625', '', 'Out-of-Frame', 'Intra-chr', '17q21.33', '17q23.2', '', '', '', '', 'Transcription_Factor', '', ''), ('16820', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A086-01A', '', '100', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('16821', 'TopHat-Fusion', 'PSPC1_LINC00544', 'PSPC1', 'chr13', '20325351', '-', 'LINC00544', 'chr13', '30513714', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A250-01A', '', '159', '', 'Out-of-Frame', 'Intra-chr', '13q12.11', '13q12.3', '', '', '', '', '', '', ''), ('16822', 'TopHat-Fusion', 'PSPC1_LINC00544', 'PSPC1', 'chr13', '20325410', '-', 'LINC00544', 'chr13', '30510694', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A250-01A', '', '191', '', 'Out-of-Frame', 'Intra-chr', '13q12.11', '13q12.3', '', '', '', '', '', '', ''), ('16823', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94049755', '+', 'COL1A1', 'chr17', '48267468', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A085-01A', '', '111', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('16824', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A1-A0SG-01A', '', '174', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16825', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A0TS-01A', '', '149', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16826', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0RE-01A', '', '116', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16827', 'TopHat-Fusion', 'GFM1_MLF1', 'GFM1', 'chr3', '158384174', '+', 'MLF1', 'chr3', '158310222', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12Q-01A', '', '140', '', 'In-Frame', 'Intra-chr', '3q25.32', '3q25.32', '', '', '', '', '', '', ''), ('16828', 'TopHat-Fusion', 'THSD4_LRRC49', 'THSD4', 'chr15', '71447270', '+', 'LRRC49', 'chr15', '71329517', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-GI-A2C8-01A', '', '143', '', 'Out-of-Frame', 'Intra-chr', '15q23', '15q23', '', '', '', '', '', '', ''), ('16829', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235963', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0WS-01A', '', '632', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16830', 'TopHat-Fusion', 'BRWD1_LINC00114', 'BRWD1', 'chr21', '40684766', '-', 'LINC00114', 'chr21', '40112337', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-GI-A2C8-01A', '', '124', '', 'CDS-3\'UTR', 'Intra-chr', '21q22.2', '21q22.2', '', '', '', '', '', '', ''), ('16831', 'TopHat-Fusion', 'NSMCE4A_ATE1', 'NSMCE4A', 'chr10', '123724800', '-', 'ATE1', 'chr10', '123503372', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A142-01A', '', '1848', '', 'Out-of-Frame', 'Intra-chr', '10q26.13', '10q26.13', '', '', '', '', '', '', ''), ('16832', 'TopHat-Fusion', 'NSMCE4A_ATE1', 'NSMCE4A', 'chr10', '123727169', '-', 'ATE1', 'chr10', '123503372', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A142-01A', '', '1848', '', 'Out-of-Frame', 'Intra-chr', '10q26.13', '10q26.13', '', '', '', '', '', '', ''), ('16833', 'TopHat-Fusion', 'EFHD1_EIF4E2', 'EFHD1', 'chr2', '233537152', '+', 'EIF4E2', 'chr2', '233431538', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12Q-01A', '', '371', '', 'In-Frame', 'Intra-chr', '2q37.1', '2q37.1', '', '', '', '', '', '', ''), ('16834', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48265892', '-', 'COL1A2', 'chr7', '94038658', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0H7-01A', '', '115', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16835', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48270000', '-', 'COL1A2', 'chr7', '94052286', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-GI-A2C8-01A', '', '132', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16836', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48273303', '-', 'COL1A2', 'chr7', '94043531', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0H7-01A', '', '167', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16837', 'TopHat-Fusion', 'ARFGEF3_LOC100507406', 'ARFGEF3', 'chr6', '138613189', '+', 'LOC100507406', 'chr6', '138051733', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12Q-01A', '', '115', '', 'Out-of-Frame', 'Intra-chr', '6q23.3', '6q23.3', '', '', '', '', '', '', '');
INSERT INTO `ChimerSeq_dump` VALUES ('16838', 'TopHat-Fusion', 'ARFGEF3_LOC100507406', 'ARFGEF3', 'chr6', '138615262', '+', 'LOC100507406', 'chr6', '138051733', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12Q-01A', '', '115', '', 'Out-of-Frame', 'Intra-chr', '6q23.3', '6q23.3', '', '', '', '', '', '', ''), ('16839', 'TopHat-Fusion', 'KLHL21_TNFRSF9', 'KLHL21', 'chr1', '6655544', '-', 'TNFRSF9', 'chr1', '7993240', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12Q-01A', '', '131', '', 'Out-of-Frame', 'Intra-chr', '1p36.31', '1p36.23', '', '', '', '', '', '', ''), ('16840', 'TopHat-Fusion', 'KLHL21_TNFRSF9', 'KLHL21', 'chr1', '6655544', '-', 'TNFRSF9', 'chr1', '7993269', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12Q-01A', '', '131', '', 'Out-of-Frame', 'Intra-chr', '1p36.31', '1p36.23', '', '', '', '', '', '', ''), ('16841', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189864108', '+', 'COL1A1', 'chr17', '48266635', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0H7-01A', '', '140', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16842', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189868187', '+', 'COL1A1', 'chr17', '48272674', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0H7-01A', '', '144', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16843', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94047863', '+', 'COL1A1', 'chr17', '48265961', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-GI-A2C8-01A', '', '121', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('16844', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94052427', '+', 'COL1A1', 'chr17', '48266891', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0H7-01A', '', '249', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('16845', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94053754', '+', 'COL1A1', 'chr17', '48272460', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0H7-01A', '', '232', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('16846', 'TopHat-Fusion', 'RTFDC1_TSHZ2', 'RTFDC1', 'chr20', '55059244', '+', 'TSHZ2', 'chr20', '52103682', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0H7-01A', '', '106', '', 'Out-of-Frame', 'Intra-chr', '20q13.31', '20q13.2', '', '', '', '', '', '', ''), ('16847', 'TopHat-Fusion', 'MYO1D_TEX2', 'MYO1D', 'chr17', '31203795', '-', 'TEX2', 'chr17', '62248558', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-GI-A2C8-01A', '', '181', '', 'Out-of-Frame', 'Intra-chr', '17q11.2', '17q23.3', '', '', '', '', '', '', ''), ('16848', 'TopHat-Fusion', 'PLEKHF2_NDUFAF6', 'PLEKHF2', 'chr8', '96146257', '+', 'NDUFAF6', 'chr8', '96044222', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12Q-01A', '', '442', '', 'Out-of-Frame', 'Intra-chr', '8q22.1', '8q22.1', '', '', '', '', '', '', ''), ('16849', 'TopHat-Fusion', 'ATP2A2_RRP1', 'ATP2A2', 'chr12', '110781238', '+', 'RRP1', 'chr21', '45211230', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0RH-01A', '', '103', '', 'In-Frame', 'Inter-chr', '12q24.11', '21q22.3', '', '', '', '', '', '', ''), ('16850', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A252-01A', '', '942', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16851', 'TopHat-Fusion', 'ARFGEF2_BRWD1', 'ARFGEF2', 'chr20', '47590183', '+', 'BRWD1', 'chr21', '40622721', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A252-01A', '', '2032', '', 'Out-of-Frame', 'Inter-chr', '20q13.13', '21q22.2', '', '', '', '', '', '', ''), ('16852', 'TopHat-Fusion', 'ARFGEF2_BRWD1', 'ARFGEF2', 'chr20', '47590236', '+', 'BRWD1', 'chr21', '40622721', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A252-01A', '', '2032', '', 'Out-of-Frame', 'Inter-chr', '20q13.13', '21q22.2', '', '', '', '', '', '', ''), ('16853', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0RH-01A', '', '107', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('16854', 'TopHat-Fusion', 'UBE2J2_ACAP3', 'UBE2J2', 'chr1', '1203241', '-', 'ACAP3', 'chr1', '1229578', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A66I-01A', '', '184', '', 'Out-of-Frame', 'Intra-chr', '1p36.33', '1p36.33', '', '', '', '', '', '', ''), ('16855', 'TopHat-Fusion', 'SLF1_ZMYM2', 'SLF1', 'chr5', '93977098', '+', 'ZMYM2', 'chr13', '20641529', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A3OD-01B', '', '234', '', 'Out-of-Frame', 'Inter-chr', '5q15', '13q12.11', '', '', '', '', '', '', ''), ('16856', 'TopHat-Fusion', 'PILRA_PILRB', 'PILRA', 'chr7', '99972055', '+', 'PILRB', 'chr7', '99964715', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A66I-01A', '', '465', '', 'In-Frame', 'Intra-chr', '7q22.1', '7q22.1', '', '', '', '', '', '', ''), ('16857', 'TopHat-Fusion', 'EIF4A2_FAM149B1', 'EIF4A2', 'chr3', '186502414', '+', 'FAM149B1', 'chr10', '74959593', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AC-A2BK-01A', '', '120', '', 'In-Frame', 'Inter-chr', '3q27.3', '10q22.2', '', '', '', '', '', '', ''), ('16858', 'TopHat-Fusion', 'DIP2A_PRH1-PRR4', 'DIP2A', 'chr21', '47910631', '+', 'PRH1-PRR4', 'chr12', '11001005', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A0J2-01A', '', '312', '', 'CDS-3\'UTR', 'Inter-chr', '21q22.3', '12p13.2', '', '', '', '', '', '', ''), ('16859', 'TopHat-Fusion', 'GRB7_PGAP3', 'GRB7', 'chr17', '37898708', '+', 'PGAP3', 'chr17', '37842271', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A202-01A', '', '226', '', 'Out-of-Frame', 'Intra-chr', '17q12', '17q12', '', '', '', '', '', '', ''), ('16860', 'TopHat-Fusion', 'GRB7_PGAP3', 'GRB7', 'chr17', '37898968', '+', 'PGAP3', 'chr17', '37842271', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A202-01A', '', '226', '', 'Out-of-Frame', 'Intra-chr', '17q12', '17q12', '', '', '', '', '', '', ''), ('16861', 'TopHat-Fusion', 'GRB7_PGAP3', 'GRB7', 'chr17', '37899306', '+', 'PGAP3', 'chr17', '37842271', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A202-01A', '', '226', '', 'In-Frame', 'Intra-chr', '17q12', '17q12', '', '', '', '', '', '', ''), ('16862', 'TopHat-Fusion', 'MAL2_ZMIZ1-AS1', 'MAL2', 'chr8', '120233996', '+', 'ZMIZ1-AS1', 'chr10', '80705745', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-LD-A7W5-01A', '', '244', '', 'CDS-5\'UTR', 'Inter-chr', '8q24.12', '10q22.3', '', '', '', '', '', '', ''), ('16863', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0W5-01A', '', '476', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16864', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-LL-A7T0-01A', '', '488', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16865', 'TopHat-Fusion', 'RARA_WIPF2', 'RARA', 'chr17', '38487647', '+', 'WIPF2', 'chr17', '38430041', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A202-01A', '', '203', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16866', 'TopHat-Fusion', 'APOL3_APOL4', 'APOL3', 'chr22', '36541520', '-', 'APOL4', 'chr22', '36587957', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A0J2-01A', '', '133', '', 'Out-of-Frame', 'Intra-chr', '22q12.3', '22q12.3', '', '', '', '', '', '', ''), ('16867', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A202-01A', '', '142', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('16868', 'TopHat-Fusion', 'QARS_USP19', 'QARS', 'chr3', '49135624', '-', 'USP19', 'chr3', '49150061', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A0J2-01A', '', '140', '', 'In-Frame', 'Intra-chr', '3p21.31', '3p21.31', '', '', '', '', '', '', ''), ('16869', 'TopHat-Fusion', 'TMEM65_KRT7', 'TMEM65', 'chr8', '125343325', '-', 'KRT7', 'chr12', '52641564', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A0J2-01A', '', '317', '', 'Out-of-Frame', 'Inter-chr', '8q24.13', '12q13.13', '', '', '', '', '', '', ''), ('16870', 'TopHat-Fusion', 'HCG17_HLA-C', 'HCG17', 'chr6', '30228110', '-', 'HLA-C', 'chr6', '31239375', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0BW-01A', '', '148', '', 'Out-of-Frame', 'Intra-chr', '6p22.1', '6p21.33', '', '', '', '', '', '', ''), ('16871', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94047863', '+', 'COL1A1', 'chr17', '48265961', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1Y1-01A', '', '100', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('16872', 'TopHat-Fusion', 'PILRA_PILRB', 'PILRA', 'chr7', '99972055', '+', 'PILRB', 'chr7', '99964715', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A1HI-01A', '', '192', '', 'In-Frame', 'Intra-chr', '7q22.1', '7q22.1', '', '', '', '', '', '', ''), ('16873', 'TopHat-Fusion', 'PILRA_PILRB', 'PILRA', 'chr7', '99972055', '+', 'PILRB', 'chr7', '99964715', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1Y1-01A', '', '341', '', 'In-Frame', 'Intra-chr', '7q22.1', '7q22.1', '', '', '', '', '', '', ''), ('16874', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A27T-01A', '', '149', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16875', 'TopHat-Fusion', 'LUC7L3_C17orf64', 'LUC7L3', 'chr17', '48814386', '+', 'C17orf64', 'chr17', '58506722', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A18R-01A', '', '137', '', 'Out-of-Frame', 'Intra-chr', '17q21.33', '17q23.2', '', '', '', '', '', '', ''), ('16876', 'TopHat-Fusion', 'PTPRK_HECA', 'PTPRK', 'chr6', '128841403', '-', 'HECA', 'chr6', '139487420', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1NA-01A', '', '320', '', 'In-Frame', 'Intra-chr', '6q22.33', '6q24.1', '', '', '', '', '', '', ''), ('16877', 'TopHat-Fusion', 'DNAJC1_LOC100507377', 'DNAJC1', 'chr10', '22193450', '-', 'LOC100507377', 'chr12', '74668732', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-LL-A5YM-01A', '', '162', '', 'CDS-3\'UTR', 'Inter-chr', '10p12.31', '12q21.1', '', '', '', '', '', '', ''), ('16878', 'TopHat-Fusion', 'SEPT9_SLC26A11', '9.Sep', 'chr17', '75277635', '+', 'SLC26A11', 'chr17', '78225186', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1NA-01A', '', '148', '', 'Out-of-Frame', 'Intra-chr', '17q25.2', '17q25.3', '', '', '', '', '', '', ''), ('16879', 'TopHat-Fusion', 'SEPT9_SLC26A11', '9.Sep', 'chr17', '75284291', '+', 'SLC26A11', 'chr17', '78225186', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1NA-01A', '', '160', '', 'Out-of-Frame', 'Intra-chr', '17q25.2', '17q25.3', '', '', '', '', '', '', ''), ('16880', 'TopHat-Fusion', 'STAG1_ISY1-RAB43', 'STAG1', 'chr3', '136471036', '-', 'ISY1-RAB43', 'chr3', '128859323', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A251-01A', '', '313', '', '5\'UTR-CDS', 'Intra-chr', '3q22.3', '3q21.3', '', '', '', '', '', '', ''), ('16881', 'TopHat-Fusion', 'STAG1_ISY1-RAB43', 'STAG1', 'chr3', '136471036', '-', 'ISY1-RAB43', 'chr3', '128859327', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A251-01A', '', '313', '', '5\'UTR-CDS', 'Intra-chr', '3q22.3', '3q21.3', '', '', '', '', '', '', ''), ('16882', 'TopHat-Fusion', 'DCAF7_VMP1', 'DCAF7', 'chr17', '61628175', '+', 'VMP1', 'chr17', '57808781', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A18R-01A', '', '430', '', 'CDS-5\'UTR', 'Intra-chr', '17q23.3', '17q23.1', '', '', '', '', '', '', ''), ('16883', 'TopHat-Fusion', 'ZNF232_RABEP1', 'ZNF232', 'chr17', '5014633', '-', 'RABEP1', 'chr17', '5276748', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0DK-01A', '', '130', '', 'In-Frame', 'Intra-chr', '17p13.2', '17p13.2', '', '', '', '', '', '', ''), ('16884', 'TopHat-Fusion', 'RPRD1A_ELP2', 'RPRD1A', 'chr18', '33580258', '-', 'ELP2', 'chr18', '33710033', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1NA-01A', '', '2442', '', 'Out-of-Frame', 'Intra-chr', '18q12.2', '18q12.2', '', '', '', '', '', '', ''), ('16885', 'TopHat-Fusion', 'RPRD1A_SLC39A6', 'RPRD1A', 'chr18', '33606862', '-', 'SLC39A6', 'chr18', '33702232', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1NA-01A', '', '2197', '', 'In-Frame', 'Intra-chr', '18q12.2', '18q12.2', '', '', '', '', '', '', ''), ('16886', 'TopHat-Fusion', 'SEMA4C_AFF3', 'SEMA4C', 'chr2', '97526697', '-', 'AFF3', 'chr2', '100274207', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1NA-01A', '', '796', '', 'In-Frame', 'Intra-chr', '2q11.2', '2q11.2', '', '', '', '', '', '', ''), ('16887', 'TopHat-Fusion', 'SEMA4C_AFF3', 'SEMA4C', 'chr2', '97527315', '-', 'AFF3', 'chr2', '100266127', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1NA-01A', '', '822', '', 'Out-of-Frame', 'Intra-chr', '2q11.2', '2q11.2', '', '', '', '', '', '', ''), ('16888', 'TopHat-Fusion', 'LIG3_CACNB1', 'LIG3', 'chr17', '33326874', '+', 'CACNB1', 'chr17', '37333456', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A18R-01A', '', '142', '', 'In-Frame', 'Intra-chr', '17q12', '17q12', '', '', '', '', '', '', ''), ('16889', 'TopHat-Fusion', 'LIG3_CACNB1', 'LIG3', 'chr17', '33328421', '+', 'CACNB1', 'chr17', '37333456', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A18R-01A', '', '142', '', 'In-Frame', 'Intra-chr', '17q12', '17q12', '', '', '', '', '', '', ''), ('16890', 'TopHat-Fusion', 'LIG3_CACNB1', 'LIG3', 'chr17', '33329122', '+', 'CACNB1', 'chr17', '37333456', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A18R-01A', '', '142', '', 'Out-of-Frame', 'Intra-chr', '17q12', '17q12', '', '', '', '', '', '', ''), ('16891', 'TopHat-Fusion', 'COL1A1_COL3A1', 'COL1A1', 'chr17', '48271933', '-', 'COL3A1', 'chr2', '189864019', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A1FH-01A', '', '234', '', 'In-Frame', 'Inter-chr', '17q21.33', '2q32.2', '', '', '', '', '', '', ''), ('16892', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48265892', '-', 'COL1A2', 'chr7', '94038658', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A1FH-01A', '', '140', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16893', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48270000', '-', 'COL1A2', 'chr7', '94052286', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1NA-01A', '', '112', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('16894', 'TopHat-Fusion', 'CCT8_LINC00189', 'CCT8', 'chr21', '30437288', '-', 'LINC00189', 'chr21', '30600925', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-LL-A5YM-01A', '', '143', '', 'CDS-5\'UTR', 'Intra-chr', '21q21.3', '21q21.3', '', '', '', '', '', '', ''), ('16895', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189856953', '+', 'COL1A1', 'chr17', '48266880', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A1FH-01A', '', '106', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16896', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189868187', '+', 'COL1A1', 'chr17', '48272674', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A1FH-01A', '', '200', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('16897', 'TopHat-Fusion', 'COL1A2_COL3A1', 'COL1A2', 'chr7', '94051235', '+', 'COL3A1', 'chr2', '189867688', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A1FH-01A', '', '117', '', 'In-Frame', 'Inter-chr', '7q21.3', '2q32.2', '', '', '', '', '', '', ''), ('16898', 'TopHat-Fusion', 'LIG1_NUCB1', 'LIG1', 'chr19', '48660270', '-', 'NUCB1', 'chr19', '49414430', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1NA-01A', '', '102', '', 'In-Frame', 'Intra-chr', '19q13.33', '19q13.33', '', '', '', '', '', '', ''), ('16899', 'TopHat-Fusion', 'SEC61A2_MAPK14', 'SEC61A2', 'chr10', '12209809', '+', 'MAPK14', 'chr6', '36059929', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A251-01A', '', '210', '', 'In-Frame', 'Inter-chr', '10p13', '6p21.31', '', '', '', '', '', '', ''), ('16900', 'TopHat-Fusion', 'PILRA_PILRB', 'PILRA', 'chr7', '99972055', '+', 'PILRB', 'chr7', '99964715', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-LL-A5YM-01A', '', '123', '', 'In-Frame', 'Intra-chr', '7q22.1', '7q22.1', '', '', '', '', '', '', ''), ('16901', 'TopHat-Fusion', 'CDH1_VPS50', 'CDH1', 'chr16', '68857528', '+', 'VPS50', 'chr7', '92952922', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A12E-01A', '', '333', '', 'Out-of-Frame', 'Inter-chr', '16q22.1', '7q21.3', '', '', '', '', '', '', ''), ('16902', 'TopHat-Fusion', 'SPAG5_BLMH', 'SPAG5', 'chr17', '26925527', '-', 'BLMH', 'chr17', '28576185', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A25B-01A', '', '110', '', 'Out-of-Frame', 'Intra-chr', '17q11.2', '17q11.2', '', '', '', '', '', '', ''), ('16903', 'TopHat-Fusion', 'KAT6B_CCDC172', 'KAT6B', 'chr10', '76741685', '+', 'CCDC172', 'chr10', '118100245', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AQ-A04L-01B', '', '530', '', 'Out-of-Frame', 'Intra-chr', '10q22.2', '10q25.3', '', '', '', '', '', '', ''), ('16904', 'TopHat-Fusion', 'CHAF1A_RPL36', 'CHAF1A', 'chr19', '4439504', '+', 'RPL36', 'chr19', '5690610', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A1FE-01A', '', '193', '', 'Out-of-Frame', 'Intra-chr', '19p13.3', '19p13.3', '', '', '', '', '', '', ''), ('16905', 'TopHat-Fusion', 'FAM129B_STXBP1', 'FAM129B', 'chr9', '130285957', '-', 'STXBP1', 'chr9', '130416036', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A25B-01A', '', '101', '', 'Out-of-Frame', 'Intra-chr', '9q33.3', '9q34.11', '', '', '', '', '', '', ''), ('16906', 'TopHat-Fusion', 'FAM129B_STXBP1', 'FAM129B', 'chr9', '130285957', '-', 'STXBP1', 'chr9', '130416280', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A25B-01A', '', '101', '', 'Out-of-Frame', 'Intra-chr', '9q33.3', '9q34.11', '', '', '', '', '', '', ''), ('16907', 'TopHat-Fusion', 'HDAC1_MARK1', 'HDAC1', 'chr1', '32796286', '+', 'MARK1', 'chr1', '220800187', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A25B-01A', '', '205', '', 'In-Frame', 'Intra-chr', '1p35.1', '1q41', 'Kinase', '', '', '', 'Transcription_Factor', '', ''), ('16908', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A147-01A', '', '132', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16909', 'TopHat-Fusion', 'TCF3_JAK2', 'TCF3', 'chr19', '1615718', '-', 'JAK2', 'chr9', '5112398', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0WZ-01A', '', '143', '', 'In-Frame', 'Inter-chr', '19p13.3', '9p24.1', 'Kinase', 'Oncogene', '', '', 'Transcription_Factor', '', ''), ('16910', 'TopHat-Fusion', 'GATA5_PRPF6', 'GATA5', 'chr20', '61049183', '+', 'PRPF6', 'chr20', '62632774', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0HL-01A', '', '305', '', 'In-Frame', 'Intra-chr', '20q13.33', '20q13.33', '', '', '', '', '', '', ''), ('16911', 'TopHat-Fusion', 'UBAC2_LOC101927437', 'UBAC2', 'chr13', '99890807', '+', 'LOC101927437', 'chr13', '100543571', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1JK-01A', '', '276', '', 'Out-of-Frame', 'Intra-chr', '13q32.3', '13q32.3', '', '', '', '', '', '', ''), ('16912', 'TopHat-Fusion', 'KXD1_TMEM59L', 'KXD1', 'chr19', '18675830', '+', 'TMEM59L', 'chr19', '18726111', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AN-A0FD-01A', '', '279', '', 'In-Frame', 'Intra-chr', '19p13.11', '19p13.11', '', '', '', '', '', '', ''), ('16913', 'TopHat-Fusion', 'SETDB2_ERH', 'SETDB2', 'chr13', '50042095', '+', 'ERH', 'chr14', '69847356', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0EE-01A', '', '383', '', 'In-Frame', 'Inter-chr', '13q14.2', '14q24.1', '', '', '', '', '', '', ''), ('16914', 'TopHat-Fusion', 'ASIC2_ACACA', 'ASIC2', 'chr17', '32233752', '-', 'ACACA', 'chr17', '35687112', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1J9-01A', '', '133', '', 'Out-of-Frame', 'Intra-chr', '17q12', '17q12', '', '', '', '', '', '', ''), ('16915', 'TopHat-Fusion', 'TMEM132E_FBXL20', 'TMEM132E', 'chr17', '32961452', '+', 'FBXL20', 'chr17', '37455242', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1J9-01A', '', '540', '', 'Out-of-Frame', 'Intra-chr', '17q12', '17q12', '', '', '', '', '', '', ''), ('16916', 'TopHat-Fusion', 'ANK1_IKBKB', 'ANK1', 'chr8', '41521604', '-', 'IKBKB', 'chr8', '42147790', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-XX-A899-01A', '', '174', '', 'In-Frame', 'Intra-chr', '8p11.21', '8p11.21', '', '', '', '', '', '', ''), ('16917', 'TopHat-Fusion', 'ANK1_IKBKB', 'ANK1', 'chr8', '41524554', '-', 'IKBKB', 'chr8', '42147790', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-XX-A899-01A', '', '174', '', 'Out-of-Frame', 'Intra-chr', '8p11.21', '8p11.21', '', '', '', '', '', '', ''), ('16918', 'TopHat-Fusion', 'SHANK2_EMSY', 'SHANK2', 'chr11', '70507700', '-', 'EMSY', 'chr11', '76246459', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-XX-A899-01A', '', '122', '', 'Out-of-Frame', 'Intra-chr', '11q13.4', '11q13.5', '', '', '', '', '', '', ''), ('16919', 'TopHat-Fusion', 'UVRAG_EMSY', 'UVRAG', 'chr11', '75610465', '+', 'EMSY', 'chr11', '76246461', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-XX-A899-01A', '', '103', '', 'Out-of-Frame', 'Intra-chr', '11q13.5', '11q13.5', '', '', '', '', '', '', ''), ('16920', 'TopHat-Fusion', 'KAT6A_ADAM5', 'KAT6A', 'chr8', '41905895', '-', 'ADAM5', 'chr8', '39258851', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A0D9-01A', '', '988', '', 'Out-of-Frame', 'Intra-chr', '8p11.21', '8p11.22', '', '', '', '', 'Transcription_Factor', '', ''), ('16921', 'TopHat-Fusion', 'KAT6A_ADAM5', 'KAT6A', 'chr8', '41906690', '-', 'ADAM5', 'chr8', '39258848', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A0D9-01A', '', '988', '', 'Out-of-Frame', 'Intra-chr', '8p11.21', '8p11.22', '', '', '', '', 'Transcription_Factor', '', ''), ('16922', 'TopHat-Fusion', 'KIAA0319L_PHC2', 'KIAA0319L', 'chr1', '35907846', '-', 'PHC2', 'chr1', '33790619', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XJ-01A', '', '118', '', 'Out-of-Frame', 'Intra-chr', '1p34.3', '1p35.1', '', '', '', '', '', '', ''), ('16923', 'TopHat-Fusion', 'KIAA0319L_PHC2', 'KIAA0319L', 'chr1', '35907846', '-', 'PHC2', 'chr1', '33793027', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XJ-01A', '', '118', '', 'In-Frame', 'Intra-chr', '1p34.3', '1p35.1', '', '', '', '', '', '', ''), ('16924', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1JL-01A', '', '211', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('16925', 'TopHat-Fusion', 'TADA2A_PSMD3', 'TADA2A', 'chr17', '35771476', '+', 'PSMD3', 'chr17', '38150652', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XJ-01A', '', '374', '', 'Out-of-Frame', 'Intra-chr', '17q12', '17q21.1', '', '', '', '', '', '', ''), ('16926', 'TopHat-Fusion', 'SOCS7_ARHGAP23', 'SOCS7', 'chr17', '36517657', '+', 'ARHGAP23', 'chr17', '36587074', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XJ-01A', '', '2514', '', 'Out-of-Frame', 'Intra-chr', '17q12', '17q12', '', '', '', '', '', '', ''), ('16927', 'TopHat-Fusion', 'WHSC1L1_RAB11FIP1', 'WHSC1L1', 'chr8', '38153313', '-', 'RAB11FIP1', 'chr8', '37735068', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A7-A0D9-01A', '', '371', '', 'In-Frame', 'Intra-chr', '8p11.23', '8p11.23', '', '', '', '', '', '', ''), ('16928', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677323', '+', 'IGLL5', 'chr22', '23235959', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A08R-01A', '', '356', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16929', 'TopHat-Fusion', 'AKAP8_VMP1', 'AKAP8', 'chr19', '15469777', '-', 'VMP1', 'chr17', '57842331', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A07L-01A', '', '101', '', 'In-Frame', 'Inter-chr', '19p13.12', '17q23.1', '', '', '', '', '', '', ''), ('16930', 'TopHat-Fusion', 'PLXDC1_ERBB2', 'PLXDC1', 'chr17', '37306531', '-', 'ERBB2', 'chr17', '37868700', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XJ-01A', '', '381', '', 'Out-of-Frame', 'Intra-chr', '17q12', '17q12', '', '', '', '', '', '', ''), ('16931', 'TopHat-Fusion', 'CCDC117_HSCB', 'CCDC117', 'chr22', '29179632', '+', 'HSCB', 'chr22', '29147228', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A07L-01A', '', '130', '', 'Out-of-Frame', 'Intra-chr', '22q12.1', '22q12.1', '', '', '', '', '', '', ''), ('16932', 'TopHat-Fusion', 'DPP3_LOC101929622', 'DPP3', 'chr11', '66261103', '+', 'LOC101929622', 'chr8', '37584677', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A1KT-01A', '', '114', '', 'Out-of-Frame', 'Inter-chr', '11q13.2', '8p11.23', '', '', '', '', '', '', ''), ('16933', 'TopHat-Fusion', 'GNAS_PVRL2', 'GNAS', 'chr20', '57470738', '+', 'PVRL2', 'chr19', '45385467', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XJ-01A', '', '167', '', 'Out-of-Frame', 'Inter-chr', '20q13.32', '19q13.32', '', '', '', '', '', '', ''), ('16934', 'TopHat-Fusion', 'STARD3_C17orf98', 'STARD3', 'chr17', '37810002', '+', 'C17orf98', 'chr17', '36991598', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XJ-01A', '', '170', '', 'Out-of-Frame', 'Intra-chr', '17q12', '17q12', '', '', '', '', '', '', ''), ('16935', 'TopHat-Fusion', 'STARD3_C17orf98', 'STARD3', 'chr17', '37810002', '+', 'C17orf98', 'chr17', '36993492', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1XJ-01A', '', '170', '', 'In-Frame', 'Intra-chr', '17q12', '17q12', '', '', '', '', '', '', ''), ('16936', 'TopHat-Fusion', 'RAB11FIP1_BBS1', 'RAB11FIP1', 'chr8', '37747981', '-', 'BBS1', 'chr11', '66294277', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A1KT-01A', '', '189', '', 'Out-of-Frame', 'Inter-chr', '8p11.23', '11q13.2', '', '', '', '', '', '', ''), ('16937', 'TopHat-Fusion', 'RAB11FIP1_BBS1', 'RAB11FIP1', 'chr8', '37748047', '-', 'BBS1', 'chr11', '66294277', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A1KT-01A', '', '189', '', 'Out-of-Frame', 'Inter-chr', '8p11.23', '11q13.2', '', '', '', '', '', '', ''), ('16938', 'TopHat-Fusion', 'RAB11FIP1_BBS1', 'RAB11FIP1', 'chr8', '37756588', '-', 'BBS1', 'chr11', '66288936', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A1KT-01A', '', '180', '', 'Out-of-Frame', 'Inter-chr', '8p11.23', '11q13.2', '', '', '', '', '', '', ''), ('16939', 'TopHat-Fusion', 'RAB11FIP1_BBS1', 'RAB11FIP1', 'chr8', '37756588', '-', 'BBS1', 'chr11', '66294476', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A1KT-01A', '', '180', '', 'In-Frame', 'Inter-chr', '8p11.23', '11q13.2', '', '', '', '', '', '', ''), ('16940', 'TopHat-Fusion', 'WISP3_PSMB1', 'WISP3', 'chr6', '112389527', '+', 'PSMB1', 'chr6', '170852688', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1LE-01A', '', '201', '', 'Out-of-Frame', 'Intra-chr', '6q21', '6q27', '', '', '', '', '', '', ''), ('16941', 'TopHat-Fusion', 'EMSY_INTS4', 'EMSY', 'chr11', '76175064', '+', 'INTS4', 'chr11', '77666987', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A1KT-01A', '', '209', '', 'Out-of-Frame', 'Intra-chr', '11q13.5', '11q14.1', '', '', '', '', '', '', ''), ('16942', 'TopHat-Fusion', 'EMSY_INTS4', 'EMSY', 'chr11', '76184667', '+', 'INTS4', 'chr11', '77666987', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A1KT-01A', '', '195', '', 'Out-of-Frame', 'Intra-chr', '11q13.5', '11q14.1', '', '', '', '', '', '', ''), ('16943', 'TopHat-Fusion', 'C11orf80_INTS4', 'C11orf80', 'chr11', '66556161', '+', 'INTS4', 'chr11', '77666987', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AO-A1KT-01A', '', '210', '', 'In-Frame', 'Intra-chr', '11q13.2', '11q14.1', '', '', '', '', '', '', ''), ('16944', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-A2-A0CP-01A', '', '165', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16945', 'TopHat-Fusion', 'WDR12_ASB7', 'WDR12', 'chr2', '203747458', '+', 'ASB7', 'chr15', '101185681', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-A8-A07L-01A', '', '103', '', 'Out-of-Frame', 'Inter-chr', '2q33.2', '15q26.3', '', '', '', '', '', '', ''), ('16946', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1JL-01A', '', '115', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('16947', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-77-A5GB-01B', '', '214', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16948', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677323', '+', 'IGLL5', 'chr22', '23235959', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-63-7020-01A', '', '883', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16949', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677324', '+', 'IGLL5', 'chr22', '23235963', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-92-8063-01A', '', '734', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16950', 'TopHat-Fusion', 'GMPS_PQLC2L', 'GMPS', 'chr3', '155588685', '+', 'PQLC2L', 'chr3', '157271018', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2766-01A', '', '567', '', 'Out-of-Frame', 'Intra-chr', '3q25.31', '3q25.32', '', '', '', '', '', '', ''), ('16951', 'TopHat-Fusion', 'KIAA0319L_CLSPN', 'KIAA0319L', 'chr1', '36019950', '-', 'CLSPN', 'chr1', '36204994', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2737-01A', '', '149', '', 'Out-of-Frame', 'Intra-chr', '1p34.3', '1p34.3', '', '', '', '', '', '', ''), ('16952', 'TopHat-Fusion', 'PLD3_DGKK', 'PLD3', 'chr19', '40877779', '+', 'DGKK', 'chrX', '50196671', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-22-4591-01A', '', '144', '', 'Out-of-Frame', 'Inter-chr', '19q13.2', 'Xp11.22', 'Kinase', '', '', '', '', '', ''), ('16953', 'TopHat-Fusion', 'PLD3_DGKK', 'PLD3', 'chr19', '40877779', '+', 'DGKK', 'chrX', '50196766', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-22-4591-01A', '', '144', '', 'In-Frame', 'Inter-chr', '19q13.2', 'Xp11.22', 'Kinase', '', '', '', '', '', ''), ('16954', 'TopHat-Fusion', 'PLD3_DGKK', 'PLD3', 'chr19', '40879956', '+', 'DGKK', 'chrX', '50195995', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-22-4591-01A', '', '144', '', 'In-Frame', 'Inter-chr', '19q13.2', 'Xp11.22', 'Kinase', '', '', '', '', '', ''), ('16955', 'TopHat-Fusion', 'RRP12_EXOSC1', 'RRP12', 'chr10', '99160061', '-', 'EXOSC1', 'chr10', '99197506', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2766-01A', '', '121', '', 'In-Frame', 'Intra-chr', '10q24.1', '10q24.1', '', '', '', '', '', '', ''), ('16956', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-18-3417-01A', '', '164', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16957', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-21-1079-01A', '', '118', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16958', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-21-1080-01A', '', '404', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16959', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-22-4591-01A', '', '556', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16960', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-34-5929-01A', '', '349', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16961', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-63-A5MY-01A', '', '828', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16962', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2737-01A', '', '346', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16963', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2766-01A', '', '415', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16964', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2785-01A', '', '115', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16965', 'TopHat-Fusion', 'ESYT2_VIPR2', 'ESYT2', 'chr7', '158580694', '-', 'VIPR2', 'chr7', '158852276', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-33-A4WN-01A', '', '217', '', 'Out-of-Frame', 'Intra-chr', '7q36.3', '7q36.3', '', '', '', '', '', '', ''), ('16966', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677320', '+', 'IGLL5', 'chr22', '23235962', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-18-3406-01A', '', '1391', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16967', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-18-3406-01A', '', '1391', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16968', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-22-5478-11A', '', '212', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16969', 'TopHat-Fusion', 'SKIL_FNDC3B', 'SKIL', 'chr3', '170079216', '+', 'FNDC3B', 'chr3', '172064116', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-7580-01A', '', '559', '', 'In-Frame', 'Intra-chr', '3q26.2', '3q26.31', '', '', '', '', '', '', ''), ('16970', 'TopHat-Fusion', 'SKIL_FNDC3B', 'SKIL', 'chr3', '170079216', '+', 'FNDC3B', 'chr3', '172065001', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-7580-01A', '', '559', '', 'In-Frame', 'Intra-chr', '3q26.2', '3q26.31', '', '', '', '', '', '', ''), ('16971', 'TopHat-Fusion', 'ATP11B_MCF2L2', 'ATP11B', 'chr3', '182547539', '+', 'MCF2L2', 'chr3', '182924246', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-A4BY-01A', '', '598', '', 'Out-of-Frame', 'Intra-chr', '3q26.33', '3q27.1', '', '', '', '', '', '', ''), ('16972', 'TopHat-Fusion', 'ATP11B_MCF2L2', 'ATP11B', 'chr3', '182547539', '+', 'MCF2L2', 'chr3', '182926005', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-A4BY-01A', '', '598', '', 'In-Frame', 'Intra-chr', '3q26.33', '3q27.1', '', '', '', '', '', '', ''), ('16973', 'TopHat-Fusion', 'ATP11B_MCF2L2', 'ATP11B', 'chr3', '182547539', '+', 'MCF2L2', 'chr3', '182932061', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-A4BY-01A', '', '597', '', 'Out-of-Frame', 'Intra-chr', '3q26.33', '3q27.1', '', '', '', '', '', '', ''), ('16974', 'TopHat-Fusion', 'ATP11B_KLHL6', 'ATP11B', 'chr3', '182547539', '+', 'KLHL6', 'chr3', '183269840', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-A4BY-01A', '', '159', '', 'Out-of-Frame', 'Intra-chr', '3q26.33', '3q27.1', '', '', '', '', '', '', ''), ('16975', 'TopHat-Fusion', 'YEATS2_ATP11B', 'YEATS2', 'chr3', '183495487', '+', 'ATP11B', 'chr3', '182590143', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-A4BY-01A', '', '971', '', 'In-Frame', 'Intra-chr', '3q27.1', '3q26.33', '', '', '', '', 'Transcription_Factor', '', ''), ('16976', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-7223-01A', '', '121', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('16977', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-79-5596-01A', '', '110', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('16978', 'TopHat-Fusion', 'RAB25_PMF1-BGLAP', 'RAB25', 'chr1', '156031233', '+', 'PMF1-BGLAP', 'chr1', '156202110', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-39-5037-01A', '', '553', '', 'Out-of-Frame', 'Intra-chr', '1q22', '1q22', '', '', '', '', '', '', ''), ('16979', 'TopHat-Fusion', 'CSMD1_DOCK5', 'CSMD1', 'chr8', '4812531', '-', 'DOCK5', 'chr8', '25101271', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-68-A59I-01A', '', '165', '', 'In-Frame', 'Intra-chr', '8p23.2', '8p21.2', '', '', '', '', '', '', ''), ('16980', 'TopHat-Fusion', 'SGK223_SGCZ', 'SGK223', 'chr8', '8239146', '-', 'SGCZ', 'chr8', '14237082', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2782-01A', '', '136', '', 'Out-of-Frame', 'Intra-chr', '8p23.1', '8p22', '', '', '', '', '', '', ''), ('16981', 'TopHat-Fusion', 'APOL3_APOL4', 'APOL3', 'chr22', '36541520', '-', 'APOL4', 'chr22', '36587957', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-22-5478-11A', '', '126', '', 'Out-of-Frame', 'Intra-chr', '22q12.3', '22q12.3', '', '', '', '', '', '', ''), ('16982', 'TopHat-Fusion', 'MCF2L2_YEATS2', 'MCF2L2', 'chr3', '182993864', '-', 'YEATS2', 'chr3', '183495487', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-A4BY-01A', '', '224', '', 'Out-of-Frame', 'Intra-chr', '3q27.1', '3q27.1', '', '', '', '', '', '', ''), ('16983', 'TopHat-Fusion', 'MCF2L2_YEATS2', 'MCF2L2', 'chr3', '182994052', '-', 'YEATS2', 'chr3', '183495487', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-A4BY-01A', '', '224', '', 'In-Frame', 'Intra-chr', '3q27.1', '3q27.1', '', '', '', '', '', '', ''), ('16984', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-22-5482-11A', '', '288', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16985', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677324', '+', 'IGLL5', 'chr22', '23235963', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-94-A5I4-01A', '', '359', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16986', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677324', '+', 'IGLL5', 'chr22', '23235963', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-98-A53D-01A', '', '197', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('16987', 'TopHat-Fusion', 'PACRG_PACRG-AS1', 'PACRG', 'chr6', '163510439', '+', 'PACRG-AS1', 'chr6', '163735858', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-8352-01A', '', '120', '', 'Out-of-Frame', 'Intra-chr', '6q26', '6q26', '', '', '', '', '', '', ''), ('16988', 'TopHat-Fusion', 'CASC21_CASC8', 'CASC21', 'chr8', '128302304', '+', 'CASC8', 'chr8', '128433073', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-8352-01A', '', '140', '', 'Out-of-Frame', 'Intra-chr', '8q24.21', '8q24.21', '', '', '', '', '', '', ''), ('16989', 'TopHat-Fusion', 'WHSC1L1_NUTM1', 'WHSC1L1', 'chr8', '38184247', '-', 'NUTM1', 'chr15', '34640169', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-60-2716-01A', '', '146', '', 'Out-of-Frame', 'Inter-chr', '8p11.23', '15q14', '', '', '', '', '', '', ''), ('16990', 'TopHat-Fusion', 'FAM73A_FUBP1', 'FAM73A', 'chr1', '78272098', '+', 'FUBP1', 'chr1', '78432567', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-22-5473-01A', '', '102', '', 'Out-of-Frame', 'Intra-chr', '1p31.1', '1p31.1', '', '', '', '', '', '', ''), ('16991', 'TopHat-Fusion', 'FAM73A_FUBP1', 'FAM73A', 'chr1', '78272098', '+', 'FUBP1', 'chr1', '78432732', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-22-5473-01A', '', '102', '', 'Out-of-Frame', 'Intra-chr', '1p31.1', '1p31.1', '', '', '', '', '', '', ''), ('16992', 'TopHat-Fusion', 'OPCML_NTM', 'OPCML', 'chr11', '132812824', '-', 'NTM', 'chr11', '132016171', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-22-4604-01A', '', '126', '', 'Out-of-Frame', 'Intra-chr', '11q25', '11q25', '', '', '', '', '', '', ''), ('16993', 'TopHat-Fusion', 'IRF6_DIEXF', 'IRF6', 'chr1', '209965613', '-', 'DIEXF', 'chr1', '210007360', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-22-4604-01A', '', '160', '', 'Out-of-Frame', 'Intra-chr', '1q32.2', '1q32.2', '', '', '', '', '', '', ''), ('16994', 'TopHat-Fusion', 'IRF6_DIEXF', 'IRF6', 'chr1', '209965613', '-', 'DIEXF', 'chr1', '210010798', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-22-4604-01A', '', '160', '', 'Out-of-Frame', 'Intra-chr', '1q32.2', '1q32.2', '', '', '', '', '', '', ''), ('16995', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-18-3410-01A', '', '232', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16996', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-22-4604-01A', '', '518', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16997', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-8626-01A', '', '366', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16998', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-A4ZJ-01A', '', '154', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('16999', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-60-2716-01A', '', '152', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17000', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-94-A5I4-01A', '', '874', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17001', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-68-7756-01A', '', '536', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17002', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677323', '+', 'IGLL5', 'chr22', '23235959', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-37-3789-01A', '', '164', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17003', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677324', '+', 'IGLL5', 'chr22', '23235963', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-60-2715-01A', '', '1585', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17004', 'TopHat-Fusion', 'RBM14-RBM4_LOC338694', 'RBM14-RBM4', 'chr11', '66384527', '+', 'LOC338694', 'chr11', '68915207', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-6771-01A', '', '824', '', 'CDS-3\'UTR', 'Intra-chr', '11q13.2', '11q13.3', '', '', '', '', '', '', ''), ('17005', 'TopHat-Fusion', 'CELF1_MTCH2', 'CELF1', 'chr11', '47494639', '-', 'MTCH2', 'chr11', '47660602', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-6771-01A', '', '159', '', 'Out-of-Frame', 'Intra-chr', '11p11.2', '11p11.2', '', '', '', '', '', '', ''), ('17006', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-7658-01A', '', '109', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('17007', 'TopHat-Fusion', 'HDAC1_TSSK3', 'HDAC1', 'chr1', '32796558', '-', 'TSSK3', 'chr1', '32829645', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-60-2721-01A', '', '131', '', 'In-Frame', 'Intra-chr', '1p35.1', '1p35.1', 'Kinase', '', '', '', 'Transcription_Factor', '', ''), ('17008', 'TopHat-Fusion', 'BSDC1_HDAC1', 'BSDC1', 'chr1', '32834047', '-', 'HDAC1', 'chr1', '32797074', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-60-2721-01A', '', '155', '', 'Out-of-Frame', 'Intra-chr', '1p35.1', '1p35.1', '', '', '', '', '', '', ''), ('17009', 'TopHat-Fusion', 'SNX18_GPBP1', 'SNX18', 'chr5', '53829991', '+', 'GPBP1', 'chr5', '56531858', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-60-2721-01A', '', '203', '', 'In-Frame', 'Intra-chr', '5q11.2', '5q11.2', '', '', '', '', '', '', ''), ('17010', 'TopHat-Fusion', 'SNX18_GPBP1', 'SNX18', 'chr5', '53839158', '+', 'GPBP1', 'chr5', '56531858', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-60-2721-01A', '', '203', '', 'Out-of-Frame', 'Intra-chr', '5q11.2', '5q11.2', '', '', '', '', '', '', ''), ('17011', 'TopHat-Fusion', 'SNX18_GPBP1', 'SNX18', 'chr5', '53839182', '+', 'GPBP1', 'chr5', '56531858', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-60-2721-01A', '', '203', '', 'Out-of-Frame', 'Intra-chr', '5q11.2', '5q11.2', '', '', '', '', '', '', ''), ('17012', 'TopHat-Fusion', 'CCAT1_CASC21', 'CCAT1', 'chr8', '128231054', '-', 'CASC21', 'chr8', '128302304', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-60-2715-01A', '', '101', '', 'Out-of-Frame', 'Intra-chr', '8q24.21', '8q24.21', '', '', '', '', '', '', ''), ('17013', 'TopHat-Fusion', 'LOC338694_ANO1', 'LOC338694', 'chr11', '68936581', '-', 'ANO1', 'chr11', '69978184', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-6771-01A', '', '232', '', 'Out-of-Frame', 'Intra-chr', '11q13.3', '11q13.3', '', '', '', '', '', '', ''), ('17014', 'TopHat-Fusion', 'TECR_PKN1', 'TECR', 'chr19', '14640522', '+', 'PKN1', 'chr19', '14574478', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-7658-01A', '', '263', '', 'In-Frame', 'Intra-chr', '19p13.12', '19p13.12', '', '', '', '', '', '', ''), ('17015', 'TopHat-Fusion', 'PUS10_RNF103-CHMP3', 'PUS10', 'chr2', '61244985', '+', 'RNF103-CHMP3', 'chr2', '86737601', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-60-2715-01A', '', '642', '', '5\'UTR-3\'UTR', 'Intra-chr', '2p16.1', '2p11.2', '', '', '', '', '', '', ''), ('17016', 'TopHat-Fusion', 'PUS10_RNF103-CHMP3', 'PUS10', 'chr2', '61245008', '+', 'RNF103-CHMP3', 'chr2', '86737601', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-60-2715-01A', '', '642', '', '5\'UTR-3\'UTR', 'Intra-chr', '2p16.1', '2p11.2', '', '', '', '', '', '', ''), ('17017', 'TopHat-Fusion', 'RSRC1_ATP11B', 'RSRC1', 'chr3', '157910606', '+', 'ATP11B', 'chr3', '182631781', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-39-5019-01A', '', '199', '', 'In-Frame', 'Intra-chr', '3q25.32', '3q26.33', '', '', '', '', '', '', ''), ('17018', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-18-3411-01A', '', '149', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('17019', 'TopHat-Fusion', 'OPCML_NTM', 'OPCML', 'chr11', '132812824', '-', 'NTM', 'chr11', '132016171', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-7222-11A', '', '147', '', 'Out-of-Frame', 'Intra-chr', '11q25', '11q25', '', '', '', '', '', '', ''), ('17020', 'TopHat-Fusion', 'HCG17_HLA-C', 'HCG17', 'chr6', '30228110', '-', 'HLA-C', 'chr6', '31239375', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-39-5019-01A', '', '331', '', 'Out-of-Frame', 'Intra-chr', '6p22.1', '6p21.33', '', '', '', '', '', '', ''), ('17021', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-39-5024-01A', '', '268', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17022', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-90-7766-01A', '', '1709', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17023', 'TopHat-Fusion', 'PITPNA_PRPF8', 'PITPNA', 'chr17', '1456297', '-', 'PRPF8', 'chr17', '1557309', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-8116-01A', '', '236', '', 'In-Frame', 'Intra-chr', '17p13.3', '17p13.3', '', '', '', '', '', '', ''), ('17024', 'TopHat-Fusion', 'ANO1_FGF3', 'ANO1', 'chr11', '69972300', '+', 'FGF3', 'chr11', '69631190', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-8083-01A', '', '114', '', 'Out-of-Frame', 'Intra-chr', '11q13.3', '11q13.3', '', '', '', '', '', '', ''), ('17025', 'TopHat-Fusion', 'N4BP1_LOC100506083', 'N4BP1', 'chr16', '48643685', '-', 'LOC100506083', 'chr16', '70358487', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-94-A4VJ-01A', '', '108', '', 'CDS-3\'UTR', 'Intra-chr', '16q12.1', '16q22.1', '', '', '', '', '', '', ''), ('17026', 'TopHat-Fusion', 'RPS19_CEACAM5', 'RPS19', 'chr19', '42365280', '+', 'CEACAM5', 'chr19', '42224841', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-58-8387-01A', '', '1017', '', 'In-Frame', 'Intra-chr', '19q13.2', '19q13.2', '', '', '', '', '', '', ''), ('17027', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-21-1082-01A', '', '285', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17028', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-39-5024-01A', '', '820', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17029', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-58-8391-01A', '', '221', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17030', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-34-2600-01A', '', '424', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17031', 'TopHat-Fusion', 'PLEKHA2_LOC100130964', 'PLEKHA2', 'chr8', '38775587', '+', 'LOC100130964', 'chr8', '39430762', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2727-01A', '', '289', '', 'CDS-5\'UTR', 'Intra-chr', '8p11.22', '8p11.22', '', '', '', '', '', '', ''), ('17032', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-34-2600-01A', '', '901', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17033', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-51-4080-01A', '', '135', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17034', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2727-01A', '', '621', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17035', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-8288-01A', '', '244', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17036', 'TopHat-Fusion', 'SHB_PAX5', 'SHB', 'chr9', '38016007', '-', 'PAX5', 'chr9', '37020797', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-22-4609-01A', '', '108', '', 'In-Frame', 'Intra-chr', '9p13.2', '9p13.2', '', '', '', '', '', '', ''), ('17037', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677320', '+', 'IGLL5', 'chr22', '23235959', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-NK-A5D1-01A', '', '105', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17038', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-34-5927-01A', '', '130', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('17039', 'TopHat-Fusion', 'TFG_ADGRG7', 'TFG', 'chr3', '100438901', '+', 'ADGRG7', 'chr3', '100348441', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-34-5927-01A', '', '110', '', 'Out-of-Frame', 'Intra-chr', '3q12.2', '3q12.2', '', '', '', '', '', '', ''), ('17040', 'TopHat-Fusion', 'PLXNB1_ATRIP', 'PLXNB1', 'chr3', '48458926', '-', 'ATRIP', 'chr3', '48499021', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-A53L-01A', '', '259', '', 'Out-of-Frame', 'Intra-chr', '3p21.31', '3p21.31', '', '', '', '', '', '', ''), ('17041', 'TopHat-Fusion', 'HEXA_BBS4', 'HEXA', 'chr15', '72668060', '-', 'BBS4', 'chr15', '72987517', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-L3-A524-01A', '', '181', '', 'Out-of-Frame', 'Intra-chr', '15q23', '15q24.1', '', '', '', '', '', '', ''), ('17042', 'TopHat-Fusion', 'HEXA_BBS4', 'HEXA', 'chr15', '72668060', '-', 'BBS4', 'chr15', '73002040', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-L3-A524-01A', '', '472', '', 'In-Frame', 'Intra-chr', '15q23', '15q24.1', '', '', '', '', '', '', ''), ('17043', 'TopHat-Fusion', 'RBM38_FRMD4B', 'RBM38', 'chr20', '55968388', '+', 'FRMD4B', 'chr3', '69267529', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-L3-A524-01A', '', '759', '', 'In-Frame', 'Inter-chr', '20q13.31', '3p14.1', '', '', '', '', '', '', ''), ('17044', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-6560-01A', '', '196', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('17045', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-A4QQ-01A', '', '109', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('17046', 'TopHat-Fusion', 'TARS2_VPS45', 'TARS2', 'chr1', '150464964', '+', 'VPS45', 'chr1', '150116886', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-6560-01A', '', '111', '', 'Out-of-Frame', 'Intra-chr', '1q21.3', '1q21.2', '', '', '', '', '', '', ''), ('17047', 'TopHat-Fusion', 'TARS2_VPS45', 'TARS2', 'chr1', '150469103', '+', 'VPS45', 'chr1', '150116886', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-6560-01A', '', '111', '', 'Out-of-Frame', 'Intra-chr', '1q21.3', '1q21.2', '', '', '', '', '', '', ''), ('17048', 'TopHat-Fusion', 'TARS2_VPS45', 'TARS2', 'chr1', '150469406', '+', 'VPS45', 'chr1', '150113135', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-6560-01A', '', '111', '', 'Out-of-Frame', 'Intra-chr', '1q21.3', '1q21.2', '', '', '', '', '', '', ''), ('17049', 'TopHat-Fusion', 'PPFIA1_RBFOX2', 'PPFIA1', 'chr11', '70118541', '+', 'RBFOX2', 'chr22', '36164395', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-A4QQ-01A', '', '106', '', 'In-Frame', 'Inter-chr', '11q13.3', '22q12.3', '', '', '', '', '', '', ''), ('17050', 'TopHat-Fusion', 'ITLN1_LOC101928372', 'ITLN1', 'chr1', '160849100', '-', 'LOC101928372', 'chr1', '160915081', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-7580-11A', '', '3260', '', 'Out-of-Frame', 'Intra-chr', '1q23.3', '1q23.3', '', '', '', '', '', '', ''), ('17051', 'TopHat-Fusion', 'LOC100996654_EGFR', 'LOC100996654', 'chr7', '54850035', '+', 'EGFR', 'chr7', '55087057', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-8351-01A', '', '175', '', 'Out-of-Frame', 'Intra-chr', '7p11.2', '7p11.2', '', '', '', '', '', '', ''), ('17052', 'TopHat-Fusion', 'INADL_ELDR', 'INADL', 'chr1', '62208226', '+', 'ELDR', 'chr7', '55306358', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-8351-01A', '', '221', '', 'Out-of-Frame', 'Inter-chr', '1p31.3', '7p11.2', '', '', '', '', '', '', ''), ('17053', 'TopHat-Fusion', 'GBAS_PSPH', 'GBAS', 'chr7', '56032842', '+', 'PSPH', 'chr7', '56082863', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-21-A5DI-01A', '', '340', '', 'In-Frame', 'Intra-chr', '7p11.2', '7p11.2', '', '', '', '', '', '', ''), ('17054', 'TopHat-Fusion', 'GBAS_PSPH', 'GBAS', 'chr7', '56032900', '+', 'PSPH', 'chr7', '56082864', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-21-A5DI-01A', '', '340', '', 'Out-of-Frame', 'Intra-chr', '7p11.2', '7p11.2', '', '', '', '', '', '', ''), ('17055', 'TopHat-Fusion', 'GBAS_PSPH', 'GBAS', 'chr7', '56032982', '+', 'PSPH', 'chr7', '56082863', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-21-A5DI-01A', '', '340', '', 'Out-of-Frame', 'Intra-chr', '7p11.2', '7p11.2', '', '', '', '', '', '', ''), ('17056', 'TopHat-Fusion', 'EGFR_LINC01445', 'EGFR', 'chr7', '55087057', '+', 'LINC01445', 'chr7', '54414986', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-8351-01A', '', '176', '', 'Out-of-Frame', 'Intra-chr', '7p11.2', '7p11.2', '', '', '', '', '', '', ''), ('17057', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-22-5479-01A', '', '205', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17058', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-60-2696-01A', '', '224', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17059', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2780-01A', '', '107', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17060', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-J1-A4AH-01A', '', '195', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17061', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-6560-01A', '', '170', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('17062', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-33-4586-01A', '', '153', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17063', 'TopHat-Fusion', 'C6orf132_TRERF1', 'C6orf132', 'chr6', '42071567', '-', 'TRERF1', 'chr6', '42200629', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-NC-A5HJ-01A', '', '269', '', 'Out-of-Frame', 'Intra-chr', '6p21.1', '6p21.1', '', '', '', '', '', '', ''), ('17064', 'TopHat-Fusion', 'TANK_MNAT1', 'TANK', 'chr2', '162036271', '+', 'MNAT1', 'chr14', '61434946', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-6545-01A', '', '203', '', 'Out-of-Frame', 'Inter-chr', '2q24.2', '14q23.1', '', '', '', '', '', '', ''), ('17065', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94056972', '-', 'COL1A1', 'chr17', '48266801', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-6647-01A', '', '131', '', 'Out-of-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('17066', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-6647-01A', '', '286', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17067', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-6545-01A', '', '194', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17068', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2793-01A', '', '124', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17069', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-77-A5G6-01A', '', '705', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17070', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-6798-01A', '', '237', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17071', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-98-A538-01A', '', '448', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17072', 'TopHat-Fusion', 'TFG_ADGRG7', 'TFG', 'chr3', '100438901', '+', 'ADGRG7', 'chr3', '100348441', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-98-A538-01A', '', '148', '', 'Out-of-Frame', 'Intra-chr', '3q12.2', '3q12.2', '', '', '', '', '', '', ''), ('17073', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48265892', '-', 'COL1A2', 'chr7', '94038658', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-6647-01A', '', '100', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('17074', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48273303', '-', 'COL1A2', 'chr7', '94043531', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-6647-01A', '', '153', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('17075', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48273303', '-', 'COL1A2', 'chr7', '94043531', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-6545-01A', '', '112', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('17076', 'TopHat-Fusion', 'MTMR1_CD99L2', 'MTMR1', 'chrX', '149924336', '+', 'CD99L2', 'chrX', '150038018', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-77-8136-01A', '', '126', '', 'Out-of-Frame', 'Intra-chr', 'Xq28', 'Xq28', '', '', '', '', '', '', ''), ('17077', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189868187', '+', 'COL1A1', 'chr17', '48272674', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-6647-01A', '', '150', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('17078', 'TopHat-Fusion', 'OPCML_NTM', 'OPCML', 'chr11', '132812824', '-', 'NTM', 'chr11', '132016171', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-6647-01A', '', '107', '', 'Out-of-Frame', 'Intra-chr', '11q25', '11q25', '', '', '', '', '', '', ''), ('17079', 'TopHat-Fusion', 'OPCML_NTM', 'OPCML', 'chr11', '132812824', '-', 'NTM', 'chr11', '132016171', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-6545-01A', '', '110', '', 'Out-of-Frame', 'Intra-chr', '11q25', '11q25', '', '', '', '', '', '', ''), ('17080', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94047863', '+', 'COL1A1', 'chr17', '48265961', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-6647-01A', '', '185', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('17081', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94047863', '+', 'COL1A1', 'chr17', '48265961', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-6545-01A', '', '122', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('17082', 'TopHat-Fusion', 'PJA2_ADGRV1', 'PJA2', 'chr5', '108745542', '-', 'ADGRV1', 'chr5', '90449037', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-6545-01A', '', '354', '', 'Out-of-Frame', 'Intra-chr', '5q21.3', '5q14.3', '', '', '', '', '', '', ''), ('17083', 'TopHat-Fusion', 'PJA2_ADGRV1', 'PJA2', 'chr5', '108745543', '-', 'ADGRV1', 'chr5', '90445845', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-6545-01A', '', '354', '', 'Out-of-Frame', 'Intra-chr', '5q21.3', '5q14.3', '', '', '', '', '', '', ''), ('17084', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-22-4599-01A', '', '1708', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17085', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-51-6867-01A', '', '187', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17086', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2771-01A', '', '1250', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17087', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677324', '+', 'IGLL5', 'chr22', '23235963', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-39-5021-01A', '', '2525', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17088', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677324', '+', 'IGLL5', 'chr22', '23235963', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2787-01A', '', '950', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17089', 'TopHat-Fusion', 'DLG1_WDR53', 'DLG1', 'chr3', '197009549', '-', 'WDR53', 'chr3', '196281677', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-51-6867-01A', '', '224', '', 'In-Frame', 'Intra-chr', '3q29', '3q29', '', '', '', '', '', '', ''), ('17090', 'TopHat-Fusion', 'FOSL2_BRE', 'FOSL2', 'chr2', '28627224', '+', 'BRE', 'chr2', '28561316', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2771-01A', '', '193', '', 'Out-of-Frame', 'Intra-chr', '2p23.2', '2p23.2', '', '', '', '', '', '', ''), ('17091', 'TopHat-Fusion', 'TYMS_YES1', 'TYMS', 'chr18', '662319', '+', 'YES1', 'chr18', '732964', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-8353-01A', '', '164', '', '3\'UTR-CDS', 'Intra-chr', '18p11.32', '18p11.32', 'Kinase', '', '', '', '', '', ''), ('17092', 'TopHat-Fusion', 'NEMF_LINC01588', 'NEMF', 'chr14', '50307435', '-', 'LINC01588', 'chr14', '50459590', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-37-3783-01A', '', '143', '', 'Out-of-Frame', 'Intra-chr', '14q21.3', '14q21.3', '', '', '', '', '', '', ''), ('17093', 'TopHat-Fusion', 'NEMF_LINC01588', 'NEMF', 'chr14', '50312857', '-', 'LINC01588', 'chr14', '50459590', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-37-3783-01A', '', '153', '', 'Out-of-Frame', 'Intra-chr', '14q21.3', '14q21.3', '', '', '', '', '', '', ''), ('17094', 'TopHat-Fusion', 'EHBP1_COMMD1', 'EHBP1', 'chr2', '62991495', '+', 'COMMD1', 'chr2', '62362965', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-63-A5MR-01A', '', '186', '', 'In-Frame', 'Intra-chr', '2p15', '2p15', '', '', '', '', '', '', ''), ('17095', 'TopHat-Fusion', 'KPNA1_P3H2', 'KPNA1', 'chr3', '122186168', '-', 'P3H2', 'chr3', '189706554', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-51-6867-01A', '', '114', '', 'Out-of-Frame', 'Intra-chr', '3q21.1', '3q28', '', '', '', '', '', '', ''), ('17096', 'TopHat-Fusion', 'KPNA1_P3H2', 'KPNA1', 'chr3', '122186168', '-', 'P3H2', 'chr3', '189709362', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-51-6867-01A', '', '114', '', 'Out-of-Frame', 'Intra-chr', '3q21.1', '3q28', '', '', '', '', '', '', '');
INSERT INTO `ChimerSeq_dump` VALUES ('17097', 'TopHat-Fusion', 'YEATS2_SCHIP1', 'YEATS2', 'chr3', '183526957', '+', 'SCHIP1', 'chr3', '159140277', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-34-8456-01A', '', '1605', '', 'In-Frame', 'Intra-chr', '3q27.1', '3q25.33', '', '', '', '', '', '', ''), ('17098', 'TopHat-Fusion', 'TFG_ADGRG7', 'TFG', 'chr3', '100438901', '+', 'ADGRG7', 'chr3', '100348441', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-37-3783-01A', '', '115', '', 'Out-of-Frame', 'Intra-chr', '3q12.2', '3q12.2', '', '', '', '', '', '', ''), ('17099', 'TopHat-Fusion', 'TFG_ADGRG7', 'TFG', 'chr3', '100438901', '+', 'ADGRG7', 'chr3', '100348441', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2787-01A', '', '162', '', 'Out-of-Frame', 'Intra-chr', '3q12.2', '3q12.2', '', '', '', '', '', '', ''), ('17100', 'TopHat-Fusion', 'ITLN1_LOC101928372', 'ITLN1', 'chr1', '160849100', '-', 'LOC101928372', 'chr1', '160915081', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-77-7142-11A', '', '4748', '', 'Out-of-Frame', 'Intra-chr', '1q23.3', '1q23.3', '', '', '', '', '', '', ''), ('17101', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48270000', '-', 'COL1A2', 'chr7', '94052286', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-6561-01A', '', '130', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('17102', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48272592', '-', 'COL1A2', 'chr7', '94054428', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-6561-01A', '', '123', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('17103', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-37-3783-01A', '', '170', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17104', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2771-01A', '', '334', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17105', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-6561-01A', '', '486', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17106', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-NC-A5HN-01A', '', '106', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17107', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-O2-A52V-01A', '', '545', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17108', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-21-1070-01A', '', '1451', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17109', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-58-A46L-01A', '', '819', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17110', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677324', '+', 'IGLL5', 'chr22', '23235963', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-63-A5MI-01A', '', '139', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17111', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-21-5783-01A', '', '107', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('17112', 'TopHat-Fusion', 'THSD4_WARS', 'THSD4', 'chr15', '71839819', '+', 'WARS', 'chr14', '100803538', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-63-A5MP-01A', '', '154', '', 'In-Frame', 'Inter-chr', '15q23', '14q32.2', '', '', '', '', '', '', ''), ('17113', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94049755', '+', 'COL1A1', 'chr17', '48267468', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-60-2724-01A', '', '100', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('17114', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-18-3414-01A', '', '690', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17115', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-21-1070-01A', '', '135', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17116', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-63-A5MI-01A', '', '932', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17117', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-63-A5MP-01A', '', '279', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17118', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2734-01A', '', '287', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17119', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2770-01A', '', '653', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17120', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-96-A4JL-01A', '', '250', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17121', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48270000', '-', 'COL1A2', 'chr7', '94052286', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-60-2724-01A', '', '109', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('17122', 'TopHat-Fusion', 'PPFIA1_FLJ42102', 'PPFIA1', 'chr11', '70194525', '+', 'FLJ42102', 'chr11', '71121304', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-7699-01A', '', '238', '', 'CDS-3\'UTR', 'Intra-chr', '11q13.3', '11q13.4', '', '', '', '', '', '', ''), ('17123', 'TopHat-Fusion', 'PPFIA1_FLJ42102', 'PPFIA1', 'chr11', '70196031', '+', 'FLJ42102', 'chr11', '71120082', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-7699-01A', '', '238', '', 'CDS-3\'UTR', 'Intra-chr', '11q13.3', '11q13.4', '', '', '', '', '', '', ''), ('17124', 'TopHat-Fusion', 'CTD-2201I18.1_SERINC5', 'CTD-2201I18.1', 'chr5', '79372677', '-', 'SERINC5', 'chr5', '79470776', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-77-7142-01A', '', '138', '', 'Out-of-Frame', 'Intra-chr', '5q14.1', '5q14.1', '', '', '', '', '', '', ''), ('17125', 'TopHat-Fusion', 'RGP1_MSMP', 'RGP1', 'chr9', '35752796', '+', 'MSMP', 'chr9', '35753766', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2765-01A', '', '193', '', 'Out-of-Frame', 'Intra-chr', '9p13.3', '9p13.3', '', '', '', '', '', '', ''), ('17126', 'TopHat-Fusion', 'ACACA_KRT33A', 'ACACA', 'chr17', '35453930', '-', 'KRT33A', 'chr17', '39504219', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-O2-A52S-01A', '', '112', '', 'Out-of-Frame', 'Intra-chr', '17q12', '17q21.2', '', '', '', '', '', '', ''), ('17127', 'TopHat-Fusion', 'CLTC_VMP1', 'CLTC', 'chr17', '57728676', '+', 'VMP1', 'chr17', '57915655', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-77-7142-01A', '', '286', '', 'Out-of-Frame', 'Intra-chr', '17q23.1', '17q23.1', '', '', '', '', '', '', ''), ('17128', 'TopHat-Fusion', 'DDX39A_ADGRE5', 'DDX39A', 'chr19', '14520545', '-', 'ADGRE5', 'chr19', '14519029', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-22-4607-01A', '', '129', '', 'Out-of-Frame', 'Intra-chr', '19p13.12', '19p13.12', '', '', '', '', '', '', ''), ('17129', 'TopHat-Fusion', 'DDX39A_ADGRE5', 'DDX39A', 'chr19', '14520553', '-', 'ADGRE5', 'chr19', '14519299', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-22-4607-01A', '', '129', '', 'Out-of-Frame', 'Intra-chr', '19p13.12', '19p13.12', '', '', '', '', '', '', ''), ('17130', 'TopHat-Fusion', 'NAALADL2_ABCC5', 'NAALADL2', 'chr3', '175345173', '+', 'ABCC5', 'chr3', '183643506', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-33-4538-01A', '', '165', '', '', 'Intra-chr', '3q26.31', '3q27.1', '', '', '', '', '', '', ''), ('17131', 'TopHat-Fusion', 'FAF1_THBS1', 'FAF1', 'chr1', '51416164', '-', 'THBS1', 'chr15', '39879736', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-70-6722-01A', '', '2121', '', 'In-Frame', 'Inter-chr', '1p32.3', '15q14', '', '', '', '', 'Transcription_Factor', '', ''), ('17132', 'TopHat-Fusion', 'OPCML_NTM', 'OPCML', 'chr11', '132812824', '-', 'NTM', 'chr11', '132016171', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-51-4079-11A', '', '138', '', 'Out-of-Frame', 'Intra-chr', '11q25', '11q25', '', '', '', '', '', '', ''), ('17133', 'TopHat-Fusion', 'HCG17_HLA-C', 'HCG17', 'chr6', '30228110', '-', 'HLA-C', 'chr6', '31239375', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2765-01A', '', '616', '', 'Out-of-Frame', 'Intra-chr', '6p22.1', '6p21.33', '', '', '', '', '', '', ''), ('17134', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-22-4607-01A', '', '597', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17135', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-33-4538-01A', '', '197', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17136', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-51-4081-01A', '', '318', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17137', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2790-01A', '', '200', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17138', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-70-6722-01A', '', '177', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17139', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-70-6723-01A', '', '151', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17140', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-7698-01A', '', '397', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17141', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-8052-01A', '', '356', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17142', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677324', '+', 'IGLL5', 'chr22', '23235963', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-A510-01A', '', '380', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17143', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-33-4587-01A', '', '178', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('17144', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-34-5928-01A', '', '101', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('17145', 'TopHat-Fusion', 'OPCML_NTM', 'OPCML', 'chr11', '132812824', '-', 'NTM', 'chr11', '132016171', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-22-5472-11A', '', '136', '', 'Out-of-Frame', 'Intra-chr', '11q25', '11q25', '', '', '', '', '', '', ''), ('17146', 'TopHat-Fusion', 'OPCML_NTM', 'OPCML', 'chr11', '132812824', '-', 'NTM', 'chr11', '132016171', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-34-5928-01A', '', '175', '', 'Out-of-Frame', 'Intra-chr', '11q25', '11q25', '', '', '', '', '', '', ''), ('17147', 'TopHat-Fusion', 'OPCML_NTM', 'OPCML', 'chr11', '132812824', '-', 'NTM', 'chr11', '132016171', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-6771-11A', '', '120', '', 'Out-of-Frame', 'Intra-chr', '11q25', '11q25', '', '', '', '', '', '', ''), ('17148', 'TopHat-Fusion', 'OPCML_NTM', 'OPCML', 'chr11', '132812824', '-', 'NTM', 'chr11', '132016171', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-77-8008-01A', '', '120', '', 'Out-of-Frame', 'Intra-chr', '11q25', '11q25', '', '', '', '', '', '', ''), ('17149', 'TopHat-Fusion', 'SFTPC_SFTPA1', 'SFTPC', 'chr8', '22021464', '-', 'SFTPA1', 'chr10', '81373772', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-22-5472-11A', '', '240', '', 'In-Frame', 'Inter-chr', '8p21.3', '10q22.3', '', '', '', '', '', '', ''), ('17150', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94047863', '+', 'COL1A1', 'chr17', '48265961', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-34-5928-01A', '', '150', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('17151', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48270000', '-', 'COL1A2', 'chr7', '94052286', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-34-5928-01A', '', '223', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('17152', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189868187', '+', 'COL1A1', 'chr17', '48272674', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-34-5928-01A', '', '149', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('17153', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189871706', '+', 'COL1A1', 'chr17', '48264482', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-34-5928-01A', '', '121', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('17154', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189871715', '+', 'COL1A1', 'chr17', '48264897', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-34-5928-01A', '', '123', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('17155', 'TopHat-Fusion', 'PPIE_PPIEL', 'PPIE', 'chr1', '40209595', '+', 'PPIEL', 'chr1', '40011528', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-33-4587-01A', '', '139', '', 'Out-of-Frame', 'Intra-chr', '1p34.2', '1p34.3', '', '', '', '', '', '', ''), ('17156', 'TopHat-Fusion', 'PPIE_PPIEL', 'PPIE', 'chr1', '40209595', '+', 'PPIEL', 'chr1', '40011528', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-60-2711-01A', '', '244', '', 'Out-of-Frame', 'Intra-chr', '1p34.2', '1p34.3', '', '', '', '', '', '', ''), ('17157', 'TopHat-Fusion', 'CREBBP_TCEB2', 'CREBBP', 'chr16', '3929832', '-', 'TCEB2', 'chr16', '2827127', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-33-4587-01A', '', '148', '', 'Out-of-Frame', 'Intra-chr', '16p13.3', '16p13.3', '', '', '', '', '', '', ''), ('17158', 'TopHat-Fusion', 'CREBBP_PRSS33', 'CREBBP', 'chr16', '3929832', '-', 'PRSS33', 'chr16', '2836121', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-33-4587-01A', '', '168', '', 'In-Frame', 'Intra-chr', '16p13.3', '16p13.3', '', '', '', '', 'Transcription_Factor', '', ''), ('17159', 'TopHat-Fusion', 'AOAH_ELMO1', 'AOAH', 'chr7', '36698770', '-', 'ELMO1', 'chr7', '36934621', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-77-7140-01A', '', '149', '', 'In-Frame', 'Intra-chr', '7p14.2', '7p14.2', '', '', '', '', '', '', ''), ('17160', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-8582-01A', '', '1472', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17161', 'TopHat-Fusion', 'TRAF7_LRRC1', 'TRAF7', 'chr16', '2215936', '+', 'LRRC1', 'chr6', '53743790', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-A4QR-01A', '', '117', '', 'In-Frame', 'Inter-chr', '16p13.3', '6p12.1', '', '', '', '', '', '', ''), ('17162', 'TopHat-Fusion', 'KIAA1191_NOP16', 'KIAA1191', 'chr5', '175777615', '-', 'NOP16', 'chr5', '175811283', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-94-8491-01A', '', '100', '', 'In-Frame', 'Intra-chr', '5q35.2', '5q35.2', '', '', '', '', '', '', ''), ('17163', 'TopHat-Fusion', 'KIAA1191_NOP16', 'KIAA1191', 'chr5', '175777615', '-', 'NOP16', 'chr5', '175811374', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-94-8491-01A', '', '100', '', 'In-Frame', 'Intra-chr', '5q35.2', '5q35.2', '', '', '', '', '', '', ''), ('17164', 'TopHat-Fusion', 'PARP8_CRYL1', 'PARP8', 'chr5', '49963958', '+', 'CRYL1', 'chr13', '20987525', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-7823-01B', '', '118', '', 'Out-of-Frame', 'Inter-chr', '5q11.1', '13q12.11', '', '', '', '', '', '', ''), ('17165', 'TopHat-Fusion', 'COL3A1_COL1A1', 'COL3A1', 'chr2', '189868187', '+', 'COL1A1', 'chr17', '48272674', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-8582-01A', '', '119', '', 'In-Frame', 'Inter-chr', '2q32.2', '17q21.33', '', '', '', '', '', '', ''), ('17166', 'TopHat-Fusion', 'COL1A1_COL3A1', 'COL1A1', 'chr17', '48266781', '-', 'COL3A1', 'chr2', '189864058', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-8582-01A', '', '136', '', 'In-Frame', 'Inter-chr', '17q21.33', '2q32.2', '', '', '', '', '', '', ''), ('17167', 'TopHat-Fusion', 'PRSS3_PRSS1', 'PRSS3', 'chr9', '33798078', '+', 'PRSS1', 'chr7', '142460280', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-7582-11A', '', '110', '', 'Out-of-Frame', 'Inter-chr', '9p13.3', '7q34', '', '', '', '', '', '', ''), ('17168', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48273303', '-', 'COL1A2', 'chr7', '94043531', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-8582-01A', '', '135', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('17169', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-60-2708-01A', '', '161', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17170', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-A4QR-01A', '', '2030', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17171', 'TopHat-Fusion', 'CELSR1_SEZ6L', 'CELSR1', 'chr22', '46929523', '-', 'SEZ6L', 'chr22', '26688371', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-46-6025-01A', '', '460', '', 'In-Frame', 'Intra-chr', '22q13.31', '22q12.1', '', '', '', '', '', '', ''), ('17172', 'TopHat-Fusion', 'OTUD7B_CTSS', 'OTUD7B', 'chr1', '149949360', '-', 'CTSS', 'chr1', '150705620', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-68-7755-01A', '', '291', '', 'Out-of-Frame', 'Intra-chr', '1q21.2', '1q21.3', '', '', '', '', '', '', ''), ('17173', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-18-5592-01A', '', '1010', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17174', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-21-5786-01A', '', '2670', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17175', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-8628-01A', '', '813', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17176', 'TopHat-Fusion', 'PACRG_PACRG-AS1', 'PACRG', 'chr6', '163510438', '+', 'PACRG-AS1', 'chr6', '163735857', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-37-4129-01A', '', '149', '', 'Out-of-Frame', 'Intra-chr', '6q26', '6q26', '', '', '', '', '', '', ''), ('17177', 'TopHat-Fusion', 'SENP2_VPS8', 'SENP2', 'chr3', '185307956', '+', 'VPS8', 'chr3', '184742123', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-8628-01A', '', '239', '', 'Out-of-Frame', 'Intra-chr', '3q27.2', '3q27.2', '', '', '', '', '', '', ''), ('17178', 'TopHat-Fusion', 'TPD52L1_RNF217', 'TPD52L1', 'chr6', '125475115', '+', 'RNF217', 'chr6', '125379087', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-68-7755-01A', '', '117', '', 'Out-of-Frame', 'Intra-chr', '6q22.31', '6q22.31', '', '', '', '', '', '', ''), ('17179', 'TopHat-Fusion', 'SHC1_CKS1B', 'SHC1', 'chr1', '154941853', '-', 'CKS1B', 'chr1', '154947694', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-46-6025-01A', '', '173', '', 'In-Frame', 'Intra-chr', '1q21.3', '1q21.3', 'Kinase', '', '', '', '', '', ''), ('17180', 'TopHat-Fusion', 'SHC1_CKS1B', 'SHC1', 'chr1', '154941853', '-', 'CKS1B', 'chr1', '154948284', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-46-6025-01A', '', '166', '', 'Out-of-Frame', 'Intra-chr', '1q21.3', '1q21.3', 'Kinase', '', '', '', '', '', ''), ('17181', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677320', '+', 'IGLL5', 'chr22', '23235959', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2786-01A', '', '1637', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17182', 'TopHat-Fusion', 'TFG_ADGRG7', 'TFG', 'chr3', '100438901', '+', 'ADGRG7', 'chr3', '100348441', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2792-01A', '', '365', '', 'Out-of-Frame', 'Intra-chr', '3q12.2', '3q12.2', '', '', '', '', '', '', ''), ('17183', 'TopHat-Fusion', 'CLTC_VMP1', 'CLTC', 'chr17', '57739003', '+', 'VMP1', 'chr17', '57915655', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-NC-A5HK-01A', '', '724', '', 'Out-of-Frame', 'Intra-chr', '17q23.1', '17q23.1', '', '', '', '', '', '', ''), ('17184', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-3394-11A', '', '115', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('17185', 'TopHat-Fusion', 'EIF4G1_ECE2', 'EIF4G1', 'chr3', '184039449', '+', 'ECE2', 'chr3', '184008184', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-7656-01A', '', '271', '', 'In-Frame', 'Intra-chr', '3q27.1', '3q27.1', '', '', '', '', '', '', ''), ('17186', 'TopHat-Fusion', 'EIF4G1_ECE2', 'EIF4G1', 'chr3', '184039451', '+', 'ECE2', 'chr3', '184008339', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-7656-01A', '', '271', '', 'Out-of-Frame', 'Intra-chr', '3q27.1', '3q27.1', '', '', '', '', '', '', ''), ('17187', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-18-4721-01A', '', '171', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17188', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-63-A5MM-01A', '', '181', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17189', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2786-01A', '', '142', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17190', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2792-01A', '', '568', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17191', 'TopHat-Fusion', 'ACTN4_EIF3K', 'ACTN4', 'chr19', '39138546', '+', 'EIF3K', 'chr19', '39123069', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-63-A5MM-01A', '', '270', '', 'In-Frame', 'Intra-chr', '19q13.2', '19q13.2', '', '', '', '', '', '', ''), ('17192', 'TopHat-Fusion', 'OPCML_NTM', 'OPCML', 'chr11', '132812820', '-', 'NTM', 'chr11', '132016175', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-92-7340-11A', '', '152', '', 'In-Frame', 'Intra-chr', '11q25', '11q25', '', '', '', '', '', '', ''), ('17193', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-3394-11A', '', '146', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('17194', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677320', '+', 'IGLL5', 'chr22', '23235959', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2759-01A', '', '2355', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17195', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-22-4593-11A', '', '318', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17196', 'TopHat-Fusion', 'GSG1L_KCTD13', 'GSG1L', 'chr16', '27992927', '-', 'KCTD13', 'chr16', '29934510', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-8629-01A', '', '525', '', 'In-Frame', 'Intra-chr', '16p12.1', '16p11.2', '', '', '', '', '', '', ''), ('17197', 'TopHat-Fusion', 'HGS_GNAO1', 'HGS', 'chr17', '79654124', '+', 'GNAO1', 'chr16', '56377674', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-37-3792-01A', '', '121', '', 'Out-of-Frame', 'Inter-chr', '17q25.3', '16q12.2', '', '', '', '', '', '', ''), ('17198', 'TopHat-Fusion', 'PLD3_HIPK4', 'PLD3', 'chr19', '40880526', '+', 'HIPK4', 'chr19', '40886460', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2759-01A', '', '704', '', 'Out-of-Frame', 'Intra-chr', '19q13.2', '19q13.2', 'Kinase', '', '', '', '', '', ''), ('17199', 'TopHat-Fusion', 'WDR45B_B3GNTL1', 'WDR45B', 'chr17', '80601824', '-', 'B3GNTL1', 'chr17', '80904858', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-90-6837-01A', '', '428', '', 'Out-of-Frame', 'Intra-chr', '17q25.3', '17q25.3', '', '', '', '', '', '', ''), ('17200', 'TopHat-Fusion', 'SFT2D2_SUCO', 'SFT2D2', 'chr1', '168208397', '+', 'SUCO', 'chr1', '172520651', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-2576-01A', '', '231', '', 'Out-of-Frame', 'Intra-chr', '1q24.2', '1q24.3', '', '', '', '', '', '', ''), ('17201', 'TopHat-Fusion', 'ADAM9_LOC100130964', 'ADAM9', 'chr8', '38948864', '+', 'LOC100130964', 'chr8', '39424224', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2759-01A', '', '147', '', '5\'UTR-5\'UTR', 'Intra-chr', '8p11.22', '8p11.22', '', '', '', '', '', '', ''), ('17202', 'TopHat-Fusion', 'RAD51AP1_SLCO1C1', 'RAD51AP1', 'chr12', '4653069', '+', 'SLCO1C1', 'chr12', '20885842', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-37-3792-01A', '', '128', '', 'Out-of-Frame', 'Intra-chr', '12p13.32', '12p12.2', '', '', '', '', '', '', ''), ('17203', 'TopHat-Fusion', 'RAD51AP1_SLCO1C1', 'RAD51AP1', 'chr12', '4653069', '+', 'SLCO1C1', 'chr12', '20890040', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-37-3792-01A', '', '131', '', 'In-Frame', 'Intra-chr', '12p13.32', '12p12.2', '', '', '', '', '', '', ''), ('17204', 'TopHat-Fusion', 'RAD51AP1_SLCO1C1', 'RAD51AP1', 'chr12', '4653076', '+', 'SLCO1C1', 'chr12', '20885842', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-37-3792-01A', '', '128', '', 'In-Frame', 'Intra-chr', '12p13.32', '12p12.2', '', '', '', '', '', '', ''), ('17205', 'TopHat-Fusion', 'ITLN1_LOC101928372', 'ITLN1', 'chr1', '160849100', '-', 'LOC101928372', 'chr1', '160915081', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-22-4593-11A', '', '746', '', 'Out-of-Frame', 'Intra-chr', '1q23.3', '1q23.3', '', '', '', '', '', '', ''), ('17206', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-33-A5GW-01A', '', '1734', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17207', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-46-6026-01A', '', '472', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17208', 'TopHat-Fusion', 'IRF2_LOC728175', 'IRF2', 'chr4', '185395532', '-', 'LOC728175', 'chr4', '185263205', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-46-6026-01A', '', '100', '', '5\'UTR-3\'UTR', 'Intra-chr', '4q35.1', '4q35.1', '', '', '', '', '', '', ''), ('17209', 'TopHat-Fusion', 'HCG17_HLA-C', 'HCG17', 'chr6', '30228110', '-', 'HLA-C', 'chr6', '31239375', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-2576-01A', '', '248', '', 'Out-of-Frame', 'Intra-chr', '6p22.1', '6p21.33', '', '', '', '', '', '', ''), ('17210', 'TopHat-Fusion', 'HCG17_HLA-C', 'HCG17', 'chr6', '30228110', '-', 'HLA-C', 'chr6', '31239375', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-52-7809-01A', '', '123', '', 'Out-of-Frame', 'Intra-chr', '6p22.1', '6p21.33', '', '', '', '', '', '', ''), ('17211', 'TopHat-Fusion', 'HCG17_HLA-C', 'HCG17', 'chr6', '30228110', '-', 'HLA-C', 'chr6', '31239375', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-7579-11A', '', '279', '', 'Out-of-Frame', 'Intra-chr', '6p22.1', '6p21.33', '', '', '', '', '', '', ''), ('17212', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-77-7463-01A', '', '161', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('17213', 'TopHat-Fusion', 'TFG_ADGRG7', 'TFG', 'chr3', '100438901', '+', 'ADGRG7', 'chr3', '100348441', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-7697-01A', '', '217', '', 'Out-of-Frame', 'Intra-chr', '3q12.2', '3q12.2', '', '', '', '', '', '', ''), ('17214', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-7697-01A', '', '859', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17215', 'TopHat-Fusion', 'MRPL21_ANO1', 'MRPL21', 'chr11', '68670891', '-', 'ANO1', 'chr11', '69945838', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-34-5239-01A', '', '144', '', 'Out-of-Frame', 'Intra-chr', '11q13.3', '11q13.3', '', '', '', '', '', '', ''), ('17216', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-77-6845-01A', '', '104', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('17217', 'TopHat-Fusion', 'OPCML_NTM', 'OPCML', 'chr11', '132812824', '-', 'NTM', 'chr11', '132016171', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-34-5239-01A', '', '131', '', 'Out-of-Frame', 'Intra-chr', '11q25', '11q25', '', '', '', '', '', '', ''), ('17218', 'TopHat-Fusion', 'OPCML_NTM', 'OPCML', 'chr11', '132812824', '-', 'NTM', 'chr11', '132016171', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-77-7337-11A', '', '143', '', 'Out-of-Frame', 'Intra-chr', '11q25', '11q25', '', '', '', '', '', '', ''), ('17219', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94047863', '+', 'COL1A1', 'chr17', '48265961', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-22-4593-01A', '', '128', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('17220', 'TopHat-Fusion', 'COL1A1_COL1A2', 'COL1A1', 'chr17', '48270000', '-', 'COL1A2', 'chr7', '94052286', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-22-4593-01A', '', '120', '', 'In-Frame', 'Inter-chr', '17q21.33', '7q21.3', '', '', '', '', '', '', ''), ('17221', 'TopHat-Fusion', 'TXNIP_NBPF20', 'TXNIP', 'chr1', '145439258', '+', 'NBPF20', 'chr1', '145431359', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-77-6845-01A', '', '132', '', 'Out-of-Frame', 'Intra-chr', '1q21.1', '1q21.1', '', '', '', '', '', '', ''), ('17222', 'TopHat-Fusion', 'LAMA5_RBBP8NL', 'LAMA5', 'chr20', '60905543', '-', 'RBBP8NL', 'chr20', '60994785', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-O2-A52N-01A', '', '499', '', 'Out-of-Frame', 'Intra-chr', '20q13.33', '20q13.33', '', '', '', '', '', '', ''), ('17223', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-6143-01A', '', '316', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('17224', 'TopHat-Fusion', 'MBOAT1_CDKAL1', 'MBOAT1', 'chr6', '20151415', '-', 'CDKAL1', 'chr6', '21000591', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-6143-01A', '', '1001', '', 'Out-of-Frame', 'Intra-chr', '6p22.3', '6p22.3', '', '', '', '', '', '', ''), ('17225', 'TopHat-Fusion', 'MBOAT1_CDKAL1', 'MBOAT1', 'chr6', '20154882', '-', 'CDKAL1', 'chr6', '21000602', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-6143-01A', '', '954', '', 'In-Frame', 'Intra-chr', '6p22.3', '6p22.3', '', '', '', '', '', '', ''), ('17226', 'TopHat-Fusion', 'EGFR_ELDR', 'EGFR', 'chr7', '55087057', '+', 'ELDR', 'chr7', '55306358', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-O2-A52N-01A', '', '125', '', 'Out-of-Frame', 'Intra-chr', '7p11.2', '7p11.2', '', '', '', '', '', '', ''), ('17227', 'TopHat-Fusion', 'ELMO1_SCIN', 'ELMO1', 'chr7', '37136223', '-', 'SCIN', 'chr7', '12684208', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-77-6842-01A', '', '108', '', 'In-Frame', 'Intra-chr', '7p14.2', '7p21.3', '', '', '', '', '', '', ''), ('17228', 'TopHat-Fusion', 'SMARCB1_SYN3', 'SMARCB1', 'chr22', '24135874', '+', 'SYN3', 'chr22', '32913289', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-6143-01A', '', '133', '', 'In-Frame', 'Intra-chr', '22q11.23', '22q12.3', '', '', '', '', '', '', ''), ('17229', 'TopHat-Fusion', 'SMARCB1_SYN3', 'SMARCB1', 'chr22', '24135874', '+', 'SYN3', 'chr22', '32913656', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-6143-01A', '', '133', '', 'Out-of-Frame', 'Intra-chr', '22q11.23', '22q12.3', '', '', '', '', '', '', ''), ('17230', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-33-6737-11A', '', '133', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('17231', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-6143-01A', '', '187', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('17232', 'TopHat-Fusion', 'AP2A2_AP2A1', 'AP2A2', 'chr11', '988691', '+', 'AP2A1', 'chr19', '50303227', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-77-6842-01A', '', '107', '', 'Out-of-Frame', 'Inter-chr', '11p15.5', '19q13.33', '', '', '', '', '', '', ''), ('17233', 'TopHat-Fusion', 'BTN3A3_BTN3A1', 'BTN3A3', 'chr6', '26449915', '+', 'BTN3A1', 'chr6', '26411782', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-O2-A52N-01A', '', '136', '', 'In-Frame', 'Intra-chr', '6p22.2', '6p22.2', '', '', '', '', '', '', ''), ('17234', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-18-3421-01A', '', '978', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17235', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-37-4133-01A', '', '154', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17236', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-6143-01A', '', '103', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17237', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2767-01A', '', '116', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17238', 'TopHat-Fusion', 'KIF13A_F13A1', 'KIF13A', 'chr6', '17987284', '-', 'F13A1', 'chr6', '6197558', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-37-A5EM-01A', '', '427', '', 'In-Frame', 'Intra-chr', '6p22.3', '6p25.1', '', '', '', '', '', '', ''), ('17239', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-22-5477-01A', '', '361', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17240', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-33-4532-01A', '', '216', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17241', 'TopHat-Fusion', 'HIRA_MYH9', 'HIRA', 'chr22', '19370427', '-', 'MYH9', 'chr22', '36737414', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-98-7454-01A', '', '230', '', 'In-Frame', 'Intra-chr', '22q11.21', '22q12.3', '', '', '', '', '', '', ''), ('17242', 'TopHat-Fusion', 'ITLN1_LOC101928372', 'ITLN1', 'chr1', '160849100', '-', 'LOC101928372', 'chr1', '160915081', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-39-5040-11A', '', '354', '', 'Out-of-Frame', 'Intra-chr', '1q23.3', '1q23.3', '', '', '', '', '', '', ''), ('17243', 'TopHat-Fusion', 'DRG1_MYO18B', 'DRG1', 'chr22', '31799189', '+', 'MYO18B', 'chr22', '26317223', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-33-4532-01A', '', '128', '', 'In-Frame', 'Intra-chr', '22q12.2', '22q12.1', '', '', '', '', '', '', ''), ('17244', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2757-01A', '', '124', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('17245', 'TopHat-Fusion', 'MKKS_JAG1', 'MKKS', 'chr20', '10390663', '-', 'JAG1', 'chr20', '10622773', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-77-8133-01A', '', '213', '', 'In-Frame', 'Intra-chr', '20p12.2', '20p12.2', '', '', '', '', 'Transcription_Factor', '', ''), ('17246', 'TopHat-Fusion', 'MKKS_JAG1', 'MKKS', 'chr20', '10393859', '-', 'JAG1', 'chr20', '10623135', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-77-8133-01A', '', '218', '', 'In-Frame', 'Intra-chr', '20p12.2', '20p12.2', '', '', '', '', 'Transcription_Factor', '', ''), ('17247', 'TopHat-Fusion', 'F13A1_GMDS-AS1', 'F13A1', 'chr6', '6167690', '-', 'GMDS-AS1', 'chr6', '2352572', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-37-A5EM-01A', '', '154', '', 'CDS-5\'UTR', 'Intra-chr', '6p25.1', '6p25.2', '', '', '', '', '', '', ''), ('17248', 'TopHat-Fusion', 'ATP11A_CUL4A', 'ATP11A', 'chr13', '113344768', '+', 'CUL4A', 'chr13', '113907395', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-21-1081-01A', '', '150', '', 'In-Frame', 'Intra-chr', '13q34', '13q34', '', '', '', '', '', '', ''), ('17249', 'TopHat-Fusion', 'SAMD12-AS1_RTN1', 'SAMD12-AS1', 'chr8', '119634042', '-', 'RTN1', 'chr14', '60074209', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-22-4594-01A', '', '149', '', 'Out-of-Frame', 'Inter-chr', '8q24.12', '14q23.1', '', '', '', '', '', '', ''), ('17250', 'TopHat-Fusion', 'HCG17_HLA-C', 'HCG17', 'chr6', '30228110', '-', 'HLA-C', 'chr6', '31239375', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2757-01A', '', '112', '', 'Out-of-Frame', 'Intra-chr', '6p22.1', '6p21.33', '', '', '', '', '', '', ''), ('17251', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-34-8454-11A', '', '1168', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17252', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-39-5040-01A', '', '543', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17253', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-68-8250-01A', '', '610', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17254', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-94-7943-01A', '', '500', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17255', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2756-01A', '', '225', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('17256', 'TopHat-Fusion', 'PIK3CB_BFSP2', 'PIK3CB', 'chr3', '138452202', '-', 'BFSP2', 'chr3', '133185671', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2756-01A', '', '165', '', 'In-Frame', 'Intra-chr', '3q22.3', '3q22.1', '', '', '', '', '', '', ''), ('17257', 'TopHat-Fusion', 'GPR39_MGAT5', 'GPR39', 'chr2', '133392020', '+', 'MGAT5', 'chr2', '135028120', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2756-01A', '', '443', '', 'Out-of-Frame', 'Intra-chr', '2q21.2', '2q21.2', '', '', '', '', '', '', ''), ('17258', 'TopHat-Fusion', 'PHGDH_HMGCS2', 'PHGDH', 'chr1', '120283140', '+', 'HMGCS2', 'chr1', '120295296', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-8277-01A', '', '294', '', 'In-Frame', 'Intra-chr', '1p12', '1p12', '', '', '', '', '', '', ''), ('17259', 'TopHat-Fusion', 'ITGB4_SMIM6', 'ITGB4', 'chr17', '73729772', '+', 'SMIM6', 'chr17', '73642734', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-3394-01A', '', '251', '', 'Out-of-Frame', 'Intra-chr', '17q25.1', '17q25.1', '', '', '', '', '', '', ''), ('17260', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-63-A5MS-01A', '', '361', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17261', 'TopHat-Fusion', 'CLTC_VMP1', 'CLTC', 'chr17', '57746300', '+', 'VMP1', 'chr17', '57886156', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2781-01A', '', '105', '', 'In-Frame', 'Intra-chr', '17q23.1', '17q23.1', '', '', '', '', '', '', ''), ('17262', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-21-1083-01A', '', '110', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('17263', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2788-01A', '', '128', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('17264', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-22-5472-01A', '', '186', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17265', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-22-5480-01A', '', '297', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17266', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-3394-01A', '', '317', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17267', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2781-01A', '', '162', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17268', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2788-01A', '', '422', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17269', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-77-8150-01A', '', '140', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17270', 'TopHat-Fusion', 'ALDH3B2_ALDH3B1', 'ALDH3B2', 'chr11', '67434044', '-', 'ALDH3B1', 'chr11', '67786638', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-22-5472-01A', '', '217', '', 'Out-of-Frame', 'Intra-chr', '11q13.2', '11q13.2', '', '', '', '', '', '', ''), ('17271', 'TopHat-Fusion', 'HCG17_HLA-C', 'HCG17', 'chr6', '30228110', '-', 'HLA-C', 'chr6', '31239375', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-33-AASD-01A', '', '100', '', 'Out-of-Frame', 'Intra-chr', '6p22.1', '6p21.33', '', '', '', '', '', '', ''), ('17272', 'TopHat-Fusion', 'FN1_PECR', 'FN1', 'chr2', '216242897', '-', 'PECR', 'chr2', '216931240', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-37-4130-01A', '', '135', '', 'In-Frame', 'Intra-chr', '2q35', '2q35', '', '', '', '', '', '', ''), ('17273', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677320', '+', 'IGLL5', 'chr22', '23235959', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-77-7139-01A', '', '436', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17274', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-33-4566-01A', '', '218', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17275', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677323', '+', 'IGLL5', 'chr22', '23235962', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-22-5482-01A', '', '972', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17276', 'TopHat-Fusion', 'U2AF2_NLRP9', 'U2AF2', 'chr19', '56181057', '+', 'NLRP9', 'chr19', '56220409', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-33-4547-01A', '', '210', '', 'Out-of-Frame', 'Intra-chr', '19q13.42', '19q13.42', '', '', '', '', '', '', ''), ('17277', 'TopHat-Fusion', 'NUB1_ABCB8', 'NUB1', 'chr7', '151042551', '+', 'ABCB8', 'chr7', '150742295', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2800-01A', '', '102', '', 'In-Frame', 'Intra-chr', '7q36.1', '7q36.1', '', '', '', '', '', '', ''), ('17278', 'TopHat-Fusion', 'RARS_SLIT3', 'RARS', 'chr5', '167944921', '+', 'SLIT3', 'chr5', '168311725', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-68-8251-01A', '', '141', '', 'Out-of-Frame', 'Intra-chr', '5q34', '5q34', '', '', '', '', '', '', ''), ('17279', 'TopHat-Fusion', 'ITM2B_RB1', 'ITM2B', 'chr13', '48828071', '+', 'RB1', 'chr13', '49027128', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-8307-01A', '', '132', '', 'In-Frame', 'Intra-chr', '13q14.2', '13q14.2', '', '', '', '', '', '', ''), ('17280', 'TopHat-Fusion', 'EPN1_U2AF2', 'EPN1', 'chr19', '56190220', '+', 'U2AF2', 'chr19', '56185299', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-33-4547-01A', '', '379', '', 'In-Frame', 'Intra-chr', '19q13.42', '19q13.42', '', '', '', '', '', '', ''), ('17281', 'TopHat-Fusion', 'SPIRE1_PTPN2', 'SPIRE1', 'chr18', '12592487', '-', 'PTPN2', 'chr18', '12830942', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-68-8251-01A', '', '106', '', 'Out-of-Frame', 'Intra-chr', '18p11.21', '18p11.21', '', '', '', '', '', '', ''), ('17282', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-22-5478-01A', '', '139', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17283', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-33-4547-01A', '', '109', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17284', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-1622-01A', '', '169', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17285', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-8307-01A', '', '184', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17286', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2800-01A', '', '125', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17287', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-8664-01A', '', '108', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17288', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-98-A53H-01A', '', '155', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17289', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-NC-A5HD-01A', '', '366', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17290', 'TopHat-Fusion', 'PCGF3_FANCI', 'PCGF3', 'chr4', '738475', '+', 'FANCI', 'chr15', '89856134', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-6770-01A', '', '302', '', 'In-Frame', 'Inter-chr', '4p16.3', '15q26.1', '', '', '', '', '', '', ''), ('17291', 'TopHat-Fusion', 'CLTC_VMP1', 'CLTC', 'chr17', '57697533', '+', 'VMP1', 'chr17', '57842331', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-33-6737-01A', '', '367', '', 'In-Frame', 'Intra-chr', '17q23.1', '17q23.1', '', '', '', '', '', '', ''), ('17292', 'TopHat-Fusion', 'PVT1_CASC11', 'PVT1', 'chr8', '128806979', '+', 'CASC11', 'chr8', '128746204', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-5898-01A', '', '654', '', 'Out-of-Frame', 'Intra-chr', '8q24.21', '8q24.21', '', '', '', '', '', '', ''), ('17293', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-68-A59J-01A', '', '224', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17294', 'TopHat-Fusion', 'KDM2A_RHOD', 'KDM2A', 'chr11', '66888828', '+', 'RHOD', 'chr11', '66833366', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-33-6737-01A', '', '324', '', 'In-Frame', 'Intra-chr', '11q13.2', '11q13.2', '', '', '', '', '', '', ''), ('17295', 'TopHat-Fusion', 'ERGIC1_RANBP17', 'ERGIC1', 'chr5', '172341840', '+', 'RANBP17', 'chr5', '170720886', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-33-6737-01A', '', '925', '', 'In-Frame', 'Intra-chr', '5q35.1', '5q35.1', '', '', '', '', '', '', ''), ('17296', 'TopHat-Fusion', 'USP48_MAN1C1', 'USP48', 'chr1', '22109316', '-', 'MAN1C1', 'chr1', '26110153', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-8070-01A', '', '932', '', 'In-Frame', 'Intra-chr', '1p36.12', '1p36.11', '', '', '', '', '', '', ''), ('17297', 'TopHat-Fusion', 'TXNRD1_CHST11', 'TXNRD1', 'chr12', '104733050', '+', 'CHST11', 'chr12', '104858480', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-63-A5MJ-01A', '', '2043', '', 'In-Frame', 'Intra-chr', '12q23.3', '12q23.3', '', '', '', '', '', '', ''), ('17298', 'TopHat-Fusion', 'MCF2L2_ALG3', 'MCF2L2', 'chr3', '182971259', '+', 'ALG3', 'chr3', '183963599', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-5898-01A', '', '206', '', 'Out-of-Frame', 'Intra-chr', '3q27.1', '3q27.1', '', '', '', '', '', '', ''), ('17299', 'TopHat-Fusion', 'ECE2_MCF2L2', 'ECE2', 'chr3', '183999552', '+', 'MCF2L2', 'chr3', '182971259', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-5898-01A', '', '282', '', 'In-Frame', 'Intra-chr', '3q27.1', '3q27.1', '', '', '', '', '', '', ''), ('17300', 'TopHat-Fusion', 'ECE2_MCF2L2', 'ECE2', 'chr3', '184000600', '+', 'MCF2L2', 'chr3', '182971259', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-5898-01A', '', '282', '', 'Out-of-Frame', 'Intra-chr', '3q27.1', '3q27.1', '', '', '', '', '', '', ''), ('17301', 'TopHat-Fusion', 'TBL1XR1_KCNMB2-AS1', 'TBL1XR1', 'chr3', '176914908', '-', 'KCNMB2-AS1', 'chr3', '178244412', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-5898-01A', '', '142', '', '5\'UTR-5\'UTR', 'Intra-chr', '3q26.32', '3q26.32', '', '', '', '', '', '', ''), ('17302', 'TopHat-Fusion', 'TBL1XR1_KCNMB2-AS1', 'TBL1XR1', 'chr3', '176914908', '-', 'KCNMB2-AS1', 'chr3', '178253686', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-5898-01A', '', '163', '', '5\'UTR-5\'UTR', 'Intra-chr', '3q26.32', '3q26.32', '', '', '', '', '', '', ''), ('17303', 'TopHat-Fusion', 'TBL1Y_TBL1X', 'TBL1Y', 'chrY', '6938901', '+', 'TBL1X', 'chrX', '9661188', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-6770-01A', '', '145', '', 'In-Frame', 'Inter-chr', 'Yp11.2', 'Xp22.2', '', '', '', '', 'Transcription_Factor', '', ''), ('17304', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-6770-01A', '', '290', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17305', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-5898-01A', '', '320', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17306', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-60-2707-01A', '', '607', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17307', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2755-01A', '', '410', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17308', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-85-8070-01A', '', '369', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17309', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-94-7033-01A', '', '197', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17310', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-34-5231-01A', '', '2543', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17311', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-A4ZK-01A', '', '441', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17312', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-A5DS-01A', '', '1128', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17313', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-L3-A4E7-01A', '', '1222', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17314', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677322', '+', 'IGLL5', 'chr22', '23235958', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-96-8170-01A', '', '910', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17315', 'TopHat-Fusion', 'PCID2_GRK1', 'PCID2', 'chr13', '113857779', '-', 'GRK1', 'chr13', '114322947', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-A4ZK-01A', '', '140', '', 'In-Frame', 'Intra-chr', '13q34', '13q34', 'Kinase', '', '', 'Receptor', '', '', ''), ('17316', 'TopHat-Fusion', 'PCID2_ATP4B', 'PCID2', 'chr13', '113862912', '-', 'ATP4B', 'chr13', '114309256', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-A4ZK-01A', '', '2271', '', 'Out-of-Frame', 'Intra-chr', '13q34', '13q34', '', '', '', '', '', '', ''), ('17317', 'TopHat-Fusion', 'SFTPC_CD68', 'SFTPC', 'chr8', '22020192', '-', 'CD68', 'chr17', '7483251', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-51-4080-11A', '', '112', '', 'Out-of-Frame', 'Inter-chr', '8p21.3', '17p13.1', '', '', '', '', '', '', ''), ('17318', 'TopHat-Fusion', 'APOL3_APOL4', 'APOL3', 'chr22', '36541520', '-', 'APOL4', 'chr22', '36587957', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-51-4080-11A', '', '226', '', 'Out-of-Frame', 'Intra-chr', '22q12.3', '22q12.3', '', '', '', '', '', '', ''), ('17319', 'TopHat-Fusion', 'CUL4A_TMEM255B', 'CUL4A', 'chr13', '113893864', '+', 'TMEM255B', 'chr13', '114502311', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-A4ZK-01A', '', '112', '', 'Out-of-Frame', 'Intra-chr', '13q34', '13q34', '', '', '', '', '', '', ''), ('17320', 'TopHat-Fusion', 'CUL4A_TMEM255B', 'CUL4A', 'chr13', '113897358', '+', 'TMEM255B', 'chr13', '114502311', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-A4ZK-01A', '', '112', '', 'Out-of-Frame', 'Intra-chr', '13q34', '13q34', '', '', '', '', '', '', ''), ('17321', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-21-1077-01A', '', '1412', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17322', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-22-4595-01A', '', '3987', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17323', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-5670-11A', '', '230', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17324', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-5897-01A', '', '6826', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17325', 'TopHat-Fusion', 'PACRG_PACRG-AS1', 'PACRG', 'chr6', '163510438', '+', 'PACRG-AS1', 'chr6', '163735857', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-5670-11A', '', '129', '', 'Out-of-Frame', 'Intra-chr', '6q26', '6q26', '', '', '', '', '', '', ''), ('17326', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-39-5034-01A', '', '170', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('17327', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-O2-A52W-01A', '', '100', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('17328', 'TopHat-Fusion', 'MBD4_LNX1', 'MBD4', 'chr3', '129151940', '-', 'LNX1', 'chr4', '54389156', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-7657-01A', '', '101', '', 'In-Frame', 'Inter-chr', '3q21.3', '4q12', '', '', '', '', '', '', ''), ('17329', 'TopHat-Fusion', 'MBD4_LNX1', 'MBD4', 'chr3', '129151940', '-', 'LNX1', 'chr4', '54390361', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-7657-01A', '', '101', '', 'In-Frame', 'Inter-chr', '3q21.3', '4q12', '', '', '', '', '', '', ''), ('17330', 'TopHat-Fusion', 'COL1A2_COL1A1', 'COL1A2', 'chr7', '94047863', '+', 'COL1A1', 'chr17', '48265961', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-5897-01A', '', '100', '', 'In-Frame', 'Inter-chr', '7q21.3', '17q21.33', '', '', '', '', '', '', 'Pub'), ('17331', 'TopHat-Fusion', 'GPBP1L1_EFCAB14', 'GPBP1L1', 'chr1', '46124362', '-', 'EFCAB14', 'chr1', '47166111', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-94-7557-01A', '', '137', '', 'Out-of-Frame', 'Intra-chr', '1p34.1', '1p33', '', '', '', '', '', '', ''), ('17332', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-21-1077-01A', '', '112', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17333', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-7657-01A', '', '591', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17334', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-5897-01A', '', '512', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17335', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-A62T-01A', '', '465', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17336', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-58-8392-01A', '', '1027', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17337', 'TopHat-Fusion', 'TAF8_SLC22A16', 'TAF8', 'chr6', '42023751', '+', 'SLC22A16', 'chr6', '110763977', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-A475-01A', '', '367', '', 'Out-of-Frame', 'Intra-chr', '6p21.1', '6q21', '', '', '', '', 'Transcription_Factor', '', ''), ('17338', 'TopHat-Fusion', 'TAF8_SLC22A16', 'TAF8', 'chr6', '42023769', '+', 'SLC22A16', 'chr6', '110763979', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-A475-01A', '', '367', '', 'In-Frame', 'Intra-chr', '6p21.1', '6q21', '', '', '', '', 'Transcription_Factor', '', ''), ('17339', 'TopHat-Fusion', 'LINC01006_RNF32', 'LINC01006', 'chr7', '156265404', '+', 'RNF32', 'chr7', '156450148', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2763-01A', '', '118', '', 'Out-of-Frame', 'Intra-chr', '7q36.3', '7q36.3', '', '', '', '', '', '', ''), ('17340', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2763-01A', '', '120', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', ''), ('17341', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-21-5784-01A', '', '633', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17342', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-5668-01A', '', '112', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17343', 'TopHat-Fusion', 'KRT15_KRT16', 'KRT15', 'chr17', '39672355', '-', 'KRT16', 'chr17', '39767230', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2742-01A', '', '314', '', 'In-Frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('17344', 'TopHat-Fusion', 'HCG17_HLA-C', 'HCG17', 'chr6', '30228110', '-', 'HLA-C', 'chr6', '31239375', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-56-A4BW-01A', '', '374', '', 'Out-of-Frame', 'Intra-chr', '6p22.1', '6p21.33', '', '', '', '', '', '', ''), ('17345', 'TopHat-Fusion', 'B4GALT5_SLC9A8', 'B4GALT5', 'chr20', '48273104', '-', 'SLC9A8', 'chr20', '48430005', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-18-3419-01A', '', '477', '', 'Out-of-Frame', 'Intra-chr', '20q13.13', '20q13.13', '', '', '', '', '', '', ''), ('17346', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-18-3419-01A', '', '9291', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17347', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-22-4609-11A', '', '253', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17348', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-43-6647-11A', '', '557', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17349', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-77-8139-01A', '', '2226', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17350', 'TopHat-Fusion', 'B4GALT1_B4GALT1-AS1', 'B4GALT1', 'chr9', '33135186', '-', 'B4GALT1-AS1', 'chr9', '33177417', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-66-2778-01A', '', '381', '', 'Out-of-Frame', 'Intra-chr', '9p21.1', '9p21.1', '', '', '', '', '', '', ''), ('17351', 'TopHat-Fusion', 'MRC2_VMP1', 'MRC2', 'chr17', '60751530', '+', 'VMP1', 'chr17', '57917128', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-58-8386-01A', '', '144', '', 'In-Frame', 'Intra-chr', '17q23.2', '17q23.1', '', '', '', '', '', '', ''), ('17352', 'TopHat-Fusion', 'RDH10_NEDD4', 'RDH10', 'chr8', '74233166', '-', 'NEDD4', 'chr15', '56253150', '-', 'Exonic', 'hg19', 'LUSC', 'TCGA-60-2698-01A', '', '102', '', 'Out-of-Frame', 'Inter-chr', '8q21.11', '15q21.3', '', '', '', '', '', '', ''), ('17353', 'TopHat-Fusion', 'SFTPB_SFTPC', 'SFTPB', 'chr2', '85889170', '+', 'SFTPC', 'chr8', '22019355', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-51-4081-11A', '', '173', '', 'Out-of-Frame', 'Inter-chr', '2p11.2', '8p21.3', '', '', '', '', '', '', ''), ('17354', 'TopHat-Fusion', 'BMS1P20_IGLL5', 'BMS1P20', 'chr22', '22677321', '+', 'IGLL5', 'chr22', '23235960', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-60-2709-01A', '', '3363', '', 'Out-of-Frame', 'Intra-chr', '22q11.22', '22q11.22', '', '', '', '', '', '', ''), ('17355', 'TopHat-Fusion', 'STAU2-AS1_STAU2', 'STAU2-AS1', 'chr8', '74334936', '+', 'STAU2', 'chr8', '74464246', '+', 'Exonic', 'hg19', 'LUSC', 'TCGA-77-7141-01A', '', '102', '', 'Out-of-Frame', 'Intra-chr', '8q21.11', '8q21.11', '', '', '', '', '', '', '');
