INSERT INTO `ChimerSeq_dump` VALUES ('41845', 'PRADA', 'PHTF2_RAB1A', 'PHTF2', 'chr7', '77469617', '+', 'RAB1A', 'chr2', '65316204', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A0U4-01A', '', '17', '2', 'In-frame', 'Inter-chr', '7q11.23', '2p14', '', '', '', '', '', '', ''), ('41846', 'PRADA', 'BCL3_ATP9B', 'BCL3', 'chr19', '45251385', '+', 'ATP9B', 'chr18', '77013381', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A0U4-01A', '', '2', '1', 'Out-of-frame', 'Inter-chr', '19q13.32', '18q23', '', '', '', '', 'Transcription_Factor', '', ''), ('41847', 'PRADA', 'C9orf5_C9orf4', 'C9orf5', 'chr9', '111868788', '-', 'C9orf4', 'chr9', '111912000', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A0U4-01A', '', '27', '2', 'In-frame', 'Intra-chr', '9q31.3', '9q31.3', '', '', '', '', '', '', ''), ('41848', 'PRADA', 'WSB2_VSIG10', 'WSB2', 'chr12', '118490115', '-', 'VSIG10', 'chr12', '118520234', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A0U4-01A', '', '41', '2', 'Out-of-frame', 'Intra-chr', '12q24.23', '12q24.23', '', '', '', '', '', '', ''), ('41849', 'PRADA', 'PRMT2_DIP2A', 'PRMT2', 'chr21', '48064400', '+', 'DIP2A', 'chr21', '47985626', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A0U4-01A', '', '12', '1', 'In-frame', 'Intra-chr', '21q22.3', '21q22.3', '', '', '', '', 'Transcription_Factor', '', ''), ('41850', 'PRADA', 'FTSJ3_SCN4A', 'FTSJ3', 'chr17', '61897439', '-', 'SCN4A', 'chr17', '62019353', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A0U4-01A', '', '7', '1', 'Out-of-frame', 'Intra-chr', '17q23.3', '17q23.3', '', '', '', '', '', '', ''), ('41851', 'PRADA', 'LIMA1_TRAPPC9', 'LIMA1', 'chr12', '50642416', '-', 'TRAPPC9', 'chr8', '140999044', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A0U4-01A', '', '6', '1', 'In-frame', 'Inter-chr', '12q13.12', '8q24.3', '', '', '', '', '', '', ''), ('41852', 'PRADA', 'TRAPPC9_LIMA1', 'TRAPPC9', 'chr8', '140998934', '-', 'LIMA1', 'chr12', '50625493', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A0U4-01A', '', '3', '1', 'In-frame', 'Inter-chr', '8q24.3', '12q13.12', '', '', '', '', '', '', ''), ('41853', 'PRADA', 'LRRC16A_MRS2', 'LRRC16A', 'chr6', '25285137', '+', 'MRS2', 'chr6', '24405396', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A0U4-01A', '', '4', '2', 'Out-of-frame', 'Intra-chr', '6p22.2', '6p22.3', '', '', '', '', '', '', ''), ('41854', 'PRADA', 'RAB1A_PHTF2', 'RAB1A', 'chr2', '65325105', '-', 'PHTF2', 'chr7', '77522925', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A0U4-01A', '', '12', '2', 'In-frame', 'Inter-chr', '2p14', '7q21.11', '', '', '', '', '', '', ''), ('41855', 'PRADA', 'IQGAP3_ETV3', 'IQGAP3', 'chr1', '156539168', '-', 'ETV3', 'chr1', '157095771', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A0U4-01A', '', '4', '1', 'Out-of-frame', 'Intra-chr', '1q23.1', '1q23.1', '', '', '', '', '', '', ''), ('41856', 'PRADA', 'ZKSCAN5_SMO', 'ZKSCAN5', 'chr7', '99110214', '+', 'SMO', 'chr7', '128843225', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A0U4-01A', '', '28', '1', 'In-frame', 'Intra-chr', '7q22.1', '7q32.1', '', '', '', '', '', '', ''), ('41857', 'PRADA', 'HERC4_RUFY2', 'HERC4', 'chr10', '69792535', '-', 'RUFY2', 'chr10', '70105668', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A0U4-01A', '', '21', '1', 'In-frame', 'Intra-chr', '10q21.3', '10q21.3', '', '', '', '', '', '', ''), ('41858', 'PRADA', 'TAF4_TCFL5', 'TAF4', 'chr20', '60572606', '-', 'TCFL5', 'chr20', '61490878', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AH-01A', '', '39', '4', 'In-frame', 'Intra-chr', '20q13.33', '20q13.33', '', '', '', '', '', '', ''), ('41859', 'PRADA', 'ASB1_TRAF3IP1', 'ASB1', 'chr2', '239335760', '+', 'TRAF3IP1', 'chr2', '239306100', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AH-01A', '', '2', '2', 'Out-of-frame', 'Intra-chr', '2q37.3', '2q37.3', '', '', '', '', '', '', ''), ('41860', 'PRADA', 'NEBL_DNAJC1', 'NEBL', 'chr10', '21177026', '-', 'DNAJC1', 'chr10', '22055238', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AH-01A', '', '6', '1', 'In-frame', 'Intra-chr', '10p12.31', '10p12.31', '', '', '', '', '', '', ''), ('41861', 'PRADA', 'PCNXL2_TAOK3', 'PCNXL2', 'chr1', '233270759', '-', 'TAOK3', 'chr12', '118639268', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AH-01A', '', '13', '1', 'In-frame', 'Inter-chr', '1q42.2', '12q24.23', '', '', '', '', '', '', ''), ('41862', 'PRADA', 'CCDC91_LYRM5', 'CCDC91', 'chr12', '28544344', '+', 'LYRM5', 'chr12', '25357025', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AH-01A', '', '8', '2', 'In-frame', 'Intra-chr', '12p11.22', '12p12.1', '', '', '', '', '', '', ''), ('41863', 'PRADA', 'TNPO3_RCAN1', 'TNPO3', 'chr7', '128614922', '-', 'RCAN1', 'chr21', '35896008', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AI-01A', '', '2', '1', 'Out-of-frame', 'Inter-chr', '7q32.1', '21q22.12', '', '', '', '', '', '', ''), ('41864', 'PRADA', 'ZNRF2_C7orf41', 'ZNRF2', 'chr7', '30363353', '+', 'C7orf41', 'chr7', '30197054', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AJ-01A', '', '6', '1', 'Out-of-frame', 'Intra-chr', '7p14.3', '7p14.3', '', '', '', '', '', '', ''), ('41865', 'PRADA', 'RNF170_GOLGA7', 'RNF170', 'chr8', '42725147', '-', 'GOLGA7', 'chr8', '41355028', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AJ-01A', '', '8', '1', 'Out-of-frame', 'Intra-chr', '8p11.21', '8p11.21', '', '', '', '', '', '', ''), ('41866', 'PRADA', 'CHD9_DLC1', 'CHD9', 'chr16', '53308214', '+', 'DLC1', 'chr8', '13162811', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AN-01A', '', '3', '1', 'Out-of-frame', 'Inter-chr', '16q12.2', '8p22', '', '', '', '', '', '', ''), ('41867', 'PRADA', 'TTC6_MIPOL1', 'TTC6', 'chr14', '38152169', '+', 'MIPOL1', 'chr14', '38016110', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AN-01A', '', '9', '2', 'Out-of-frame', 'Intra-chr', '14q21.1', '14q21.1', '', '', '', '', '', '', ''), ('41868', 'PRADA', 'ELMO2_STAP1', 'ELMO2', 'chr20', '45008892', '-', 'STAP1', 'chr4', '68441103', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AN-01A', '', '44', '1', 'In-frame', 'Inter-chr', '20q13.12', '4q13.2', '', '', '', '', '', '', ''), ('41869', 'PRADA', 'CAPZA2_MET', 'CAPZA2', 'chr7', '116550365', '+', 'MET', 'chr7', '116409699', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AN-01A', '', '24', '1', 'In-frame', 'Intra-chr', '7q31.2', '7q31.2', '', '', '', '', '', '', ''), ('41870', 'PRADA', 'SFRP1_ARMC5', 'SFRP1', 'chr8', '41160980', '-', 'ARMC5', 'chr16', '31473243', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AN-01A', '', '8', '1', 'In-frame', 'Inter-chr', '8p11.21', '16p11.2', '', '', '', '', '', '', ''), ('41871', 'PRADA', 'C10orf26_ARL3', 'C10orf26', 'chr10', '104503900', '+', 'ARL3', 'chr10', '104465246', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AO-01A', '', '6', '1', 'In-frame', 'Intra-chr', '10q24.32', '10q24.32', '', '', '', '', '', '', ''), ('41872', 'PRADA', 'EHBP1_COMMD1', 'EHBP1', 'chr2', '62998527', '+', 'COMMD1', 'chr2', '62362966', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AO-01A', '', '26', '1', 'In-frame', 'Intra-chr', '2p15', '2p15', '', '', '', '', '', '', ''), ('41873', 'PRADA', 'C20orf194_CEACAM16', 'C20orf194', 'chr20', '3274785', '-', 'CEACAM16', 'chr19', '45208860', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AO-01A', '', '2', '1', 'Out-of-frame', 'Inter-chr', '20p13', '19q13.32', '', '', '', '', '', '', ''), ('41874', 'PRADA', 'GCFC1_TP53I3', 'GCFC1', 'chr21', '34131391', '-', 'TP53I3', 'chr2', '24300631', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AO-01A', '', '2', '1', 'In-frame', 'Inter-chr', '21q22.11', '2p23.3', '', '', '', '', '', '', ''), ('41875', 'PRADA', 'GATA3_TAF3', 'GATA3', 'chr10', '8111561', '+', 'TAF3', 'chr10', '8055694', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AP-01A', '', '357', '2', 'In-frame', 'Intra-chr', '10p14', '10p14', '', '', '', '', 'Transcription_Factor', '', ''), ('41876', 'PRADA', 'TTLL5_TSHR', 'TTLL5', 'chr14', '76286504', '+', 'TSHR', 'chr14', '81528492', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AP-01A', '', '15', '1', 'In-frame', 'Intra-chr', '14q24.3', '14q31.1', '', '', '', '', '', '', ''), ('41877', 'PRADA', 'TTC6_MIPOL1', 'TTC6', 'chr14', '38092208', '+', 'MIPOL1', 'chr14', '38016110', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AP-01A', '', '18', '4', 'Out-of-frame', 'Intra-chr', '14q21.1', '14q21.1', '', '', '', '', '', '', ''), ('41878', 'PRADA', 'UBN1_MGRN1', 'UBN1', 'chr16', '4911103', '+', 'MGRN1', 'chr16', '4700366', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AQ-01A', '', '5', '1', 'Out-of-frame', 'Intra-chr', '16p13.3', '16p13.3', '', '', '', '', '', '', ''), ('41879', 'PRADA', 'FUBP1_SLC44A5', 'FUBP1', 'chr1', '78444569', '-', 'SLC44A5', 'chr1', '75766370', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AR-01A', '', '3', '1', 'Out-of-frame', 'Intra-chr', '1p31.1', '1p31.1', '', '', '', '', '', '', ''), ('41880', 'PRADA', 'SPAG17_PCF11', 'SPAG17', 'chr1', '118727694', '-', 'PCF11', 'chr11', '82872369', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AU-01A', '', '7', '2', 'In-frame', 'Inter-chr', '1p12', '11q14.1', '', '', '', '', '', '', ''), ('41881', 'PRADA', 'CHD7_ASPH', 'CHD7', 'chr8', '61655656', '+', 'ASPH', 'chr8', '62596747', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AU-01A', '', '9', '1', 'Out-of-frame', 'Intra-chr', '8q12.2', '8q12.3', '', '', '', '', '', '', ''), ('41882', 'PRADA', 'C2CD3_RNF169', 'C2CD3', 'chr11', '73879389', '-', 'RNF169', 'chr11', '74500671', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AV-01A', '', '7', '2', 'In-frame', 'Intra-chr', '11q13.4', '11q13.4', '', '', '', '', '', '', ''), ('41883', 'PRADA', 'ARID2_ZNF641', 'ARID2', 'chr12', '46125097', '+', 'ZNF641', 'chr12', '48741898', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AV-01A', '', '23', '1', 'In-frame', 'Intra-chr', '12q12', '12q13.11', '', '', '', '', '', '', ''), ('41884', 'PRADA', 'NSMCE2_DCLRE1C', 'NSMCE2', 'chr8', '126114729', '+', 'DCLRE1C', 'chr10', '14941311', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AW-01A', '', '27', '1', 'In-frame', 'Inter-chr', '8q24.13', '10p13', '', '', '', '', '', '', ''), ('41885', 'PRADA', 'MBD2_DOCK2', 'MBD2', 'chr18', '51715244', '-', 'DOCK2', 'chr5', '169502951', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AY-01A', '', '120', '1', 'In-frame', 'Inter-chr', '18q21.2', '5q35.1', '', '', '', '', '', '', ''), ('41886', 'PRADA', 'DDX39B_PRPH2', 'DDX39B', 'chr6', '31506540', '-', 'PRPH2', 'chr6', '42672349', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A1AY-01A', '', '35', '2', 'Out-of-frame', 'Intra-chr', '6p21.33', '6p21.1', '', '', '', '', '', '', ''), ('41887', 'PRADA', 'ASXL2_HSPH1', 'ASXL2', 'chr2', '26101035', '-', 'HSPH1', 'chr13', '31733000', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24H-01A', '', '13', '1', 'Out-of-frame', 'Inter-chr', '2p23.3', '13q12.3', '', '', '', '', '', '', ''), ('41888', 'PRADA', 'MCFD2_SRBD1', 'MCFD2', 'chr2', '47134949', '-', 'SRBD1', 'chr2', '45647033', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24H-01A', '', '16', '5', 'In-frame', 'Intra-chr', '2p21', '2p21', '', '', '', '', '', '', ''), ('41889', 'PRADA', 'PCF11_SPON1', 'PCF11', 'chr11', '82868673', '+', 'SPON1', 'chr11', '14264878', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24H-01A', '', '79', '1', 'In-frame', 'Intra-chr', '11q14.1', '11p15.2', '', '', '', '', '', '', ''), ('41890', 'PRADA', 'LMBR1_PTPRN2', 'LMBR1', 'chr7', '156516806', '-', 'PTPRN2', 'chr7', '157997965', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24K-01A', '', '54', '1', 'In-frame', 'Intra-chr', '7q36.3', '7q36.3', '', '', '', '', '', '', ''), ('41891', 'PRADA', 'PLEKHA7_SMPD1', 'PLEKHA7', 'chr11', '17035536', '-', 'SMPD1', 'chr11', '6414446', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24K-01A', '', '4', '2', 'In-frame', 'Intra-chr', '11p15.1', '11p15.4', '', '', '', '', '', '', ''), ('41892', 'PRADA', 'CLPB_MTUS2', 'CLPB', 'chr11', '72069924', '-', 'MTUS2', 'chr13', '29674910', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24K-01A', '', '10', '1', 'In-frame', 'Inter-chr', '11q13.4', '13q12.3', '', '', '', '', '', '', ''), ('41893', 'PRADA', 'TOX3_ITFG1', 'TOX3', 'chr16', '52479906', '-', 'ITFG1', 'chr16', '47196575', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24K-01A', '', '27', '1', 'Out-of-frame', 'Intra-chr', '16q12.1', '16q12.1', '', '', '', '', '', '', ''), ('41894', 'PRADA', 'EIF2B3_HYI', 'EIF2B3', 'chr1', '45392300', '-', 'HYI', 'chr1', '43917990', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24L-01A', '', '10', '1', 'In-frame', 'Intra-chr', '1p34.1', '1p34.2', '', '', '', '', '', '', ''), ('41895', 'PRADA', 'LIN52_C14orf45', 'LIN52', 'chr14', '74567941', '+', 'C14orf45', 'chr14', '74522287', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24L-01A', '', '2', '2', 'Out-of-frame', 'Intra-chr', '14q24.3', '14q24.3', '', '', '', '', '', '', ''), ('41896', 'PRADA', 'LTBP1_BIRC6', 'LTBP1', 'chr2', '33246273', '+', 'BIRC6', 'chr2', '32631567', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24N-01A', '', '37', '1', 'In-frame', 'Intra-chr', '2p22.3', '2p22.3', 'Kinase', '', '', '', '', '', ''), ('41897', 'PRADA', 'IQCB1_ILDR1', 'IQCB1', 'chr3', '121508920', '-', 'ILDR1', 'chr3', '121707255', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24O-01A', '', '3', '1', 'Out-of-frame', 'Intra-chr', '3q13.33', '3q13.33', '', '', '', '', '', '', ''), ('41898', 'PRADA', 'LMBR1_EPHA1', 'LMBR1', 'chr7', '156589083', '-', 'EPHA1', 'chr7', '143098698', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24Q-01A', '', '2', '1', 'In-frame', 'Intra-chr', '7q36.3', '7q34', '', '', '', '', '', '', ''), ('41899', 'PRADA', 'UVRAG_RAD51B', 'UVRAG', 'chr11', '75827059', '+', 'RAD51B', 'chr14', '69061202', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24Q-01A', '', '5', '3', 'Out-of-frame', 'Inter-chr', '11q13.5', '14q24.1', '', '', '', '', '', '', ''), ('41900', 'PRADA', 'GALNTL4_DENND5B', 'GALNTL4', 'chr11', '11642906', '-', 'DENND5B', 'chr12', '31579358', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24Q-01A', '', '2', '1', 'Out-of-frame', 'Inter-chr', '11p15.3', '12p11.21', '', '', '', '', '', '', ''), ('41901', 'PRADA', 'RAD51B_UVRAG', 'RAD51B', 'chr14', '68934967', '+', 'UVRAG', 'chr11', '75851755', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24Q-01A', '', '2', '1', 'Out-of-frame', 'Inter-chr', '14q24.1', '11q13.5', '', '', '', '', '', '', ''), ('41902', 'PRADA', 'SOX6_GALNTL4', 'SOX6', 'chr11', '16339992', '-', 'GALNTL4', 'chr11', '11400811', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24Q-01A', '', '8', '1', 'In-frame', 'Intra-chr', '11p15.1', '11p15.3', '', '', '', '', '', '', ''), ('41903', 'PRADA', 'GNAI3_CASQ2', 'GNAI3', 'chr1', '110091460', '+', 'CASQ2', 'chr1', '116287533', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24Q-01A', '', '11', '1', 'Out-of-frame', 'Intra-chr', '1p13.3', '1p13.1', '', '', '', '', '', '', ''), ('41904', 'PRADA', 'ESR1_C6orf97', 'ESR1', 'chr6', '152129499', '+', 'C6orf97', 'chr6', '151857453', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24R-01A', '', '36', '5', 'Out-of-frame', 'Intra-chr', '6q25.1', '6q25.1', '', '', '', '', '', '', ''), ('41905', 'PRADA', 'USP1_SGIP1', 'USP1', 'chr1', '62914337', '+', 'SGIP1', 'chr1', '67091530', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24S-01A', '', '14', '1', 'Out-of-frame', 'Intra-chr', '1p31.3', '1p31.3', '', '', '', '', '', '', ''), ('41906', 'PRADA', 'ZNF431_WIZ', 'ZNF431', 'chr19', '21326446', '+', 'WIZ', 'chr19', '15540900', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24S-01A', '', '22', '3', 'Out-of-frame', 'Intra-chr', '19p12', '19p13.12', '', '', '', '', '', '', ''), ('41907', 'PRADA', 'AC011997.1_LRRC69', 'AC011997.1', 'chr2', '198557940', '+', 'LRRC69', 'chr8', '92212841', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24U-01A', '', '2', '1', 'Out-of-frame', 'Inter-chr', '2q33.1', '8q21.3', '', '', '', '', '', '', ''), ('41908', 'PRADA', 'SKAP1_IKZF3', 'SKAP1', 'chr17', '46423267', '-', 'IKZF3', 'chr17', '37922746', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24U-01A', '', '16', '1', 'In-frame', 'Intra-chr', '17q21.32', '17q12', '', '', '', '', '', '', ''), ('41909', 'PRADA', 'FSTL4_SLIT3', 'FSTL4', 'chr5', '132537625', '-', 'SLIT3', 'chr5', '168114121', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24V-01A', '', '9', '1', 'In-frame', 'Intra-chr', '5q31.1', '5q34', '', '', '', '', '', '', ''), ('41910', 'PRADA', 'FAM122B_GPC4', 'FAM122B', 'chrX', '133915851', '-', 'GPC4', 'chrX', '132458564', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24W-01A', '', '3', '1', 'Out-of-frame', 'Intra-chr', 'Xq26.3', 'Xq26.2', '', '', '', '', '', '', ''), ('41911', 'PRADA', 'HPRT1_CTPS2', 'HPRT1', 'chrX', '133609394', '+', 'CTPS2', 'chrX', '16657366', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24W-01A', '', '483', '3', 'In-frame', 'Intra-chr', 'Xq26.3', 'Xp22.2', '', '', '', '', '', '', ''), ('41912', 'PRADA', 'IQGAP2_ACOT12', 'IQGAP2', 'chr5', '75866482', '+', 'ACOT12', 'chr5', '80626759', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24Z-01A', '', '2', '1', 'Out-of-frame', 'Intra-chr', '5q13.3', '5q14.1', '', '', '', '', '', '', ''), ('41913', 'PRADA', 'RARS2_SMAP1', 'RARS2', 'chr6', '88299640', '-', 'SMAP1', 'chr6', '71508360', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24Z-01A', '', '3', '1', 'In-frame', 'Intra-chr', '6q15', '6q13', '', '', '', '', '', '', ''), ('41914', 'PRADA', 'PLXNA2_DUSP10', 'PLXNA2', 'chr1', '208383625', '-', 'DUSP10', 'chr1', '221879808', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24Z-01A', '', '5', '1', 'Out-of-frame', 'Intra-chr', '1q32.2', '1q41', '', '', '', '', '', '', ''), ('41915', 'PRADA', 'DOCK7_PPP1R12B', 'DOCK7', 'chr1', '62958375', '-', 'PPP1R12B', 'chr1', '202457661', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24Z-01A', '', '3', '1', 'Out-of-frame', 'Intra-chr', '1p31.3', '1q32.1', '', '', '', '', '', '', ''), ('41916', 'PRADA', 'SORBS2_AIF1', 'SORBS2', 'chr4', '186605908', '-', 'AIF1', 'chr6', '31584121', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24Z-01A', '', '26', '1', 'In-frame', 'Inter-chr', '4q35.1', '6p21.33', '', '', '', '', '', '', ''), ('41917', 'PRADA', 'DOCK7_INADL', 'DOCK7', 'chr1', '62958375', '-', 'INADL', 'chr1', '62626580', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24Z-01A', '', '13', '1', 'Out-of-frame', 'Intra-chr', '1p31.3', '1p31.3', '', '', '', '', '', '', ''), ('41918', 'PRADA', 'CDK19_ZFAND3', 'CDK19', 'chr6', '111136212', '-', 'ZFAND3', 'chr6', '38120011', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24Z-01A', '', '10', '1', 'Out-of-frame', 'Intra-chr', '6q21', '6p21.2', '', '', '', '', '', '', ''), ('41919', 'PRADA', 'PDE4B_MOBKL2C', 'PDE4B', 'chr1', '66731770', '+', 'MOBKL2C', 'chr1', '47079043', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24Z-01A', '', '4', '1', 'In-frame', 'Intra-chr', '1p31.3', '1p33', '', '', '', '', '', '', ''), ('41920', 'PRADA', 'PACSIN2_ZNF823', 'PACSIN2', 'chr22', '43308027', '-', 'ZNF823', 'chr19', '11836142', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A24Z-01A', '', '19', '2', 'In-frame', 'Inter-chr', '22q13.2', '19p13.2', '', '', '', '', '', '', ''), ('41921', 'PRADA', 'BCAS3_KAT7', 'BCAS3', 'chr17', '59161925', '+', 'KAT7', 'chr17', '47893165', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A250-01A', '', '6', '1', 'Out-of-frame', 'Intra-chr', '17q23.2', '17q21.33', '', '', '', '', 'Transcription_Factor', '', ''), ('41922', 'PRADA', 'SMURF2_NGFR', 'SMURF2', 'chr17', '62657947', '-', 'NGFR', 'chr17', '47579425', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A250-01A', '', '14', '1', 'Out-of-frame', 'Intra-chr', '17q24.1', '17q21.33', '', '', '', '', '', '', ''), ('41923', 'PRADA', 'SMURF2_IKZF3', 'SMURF2', 'chr17', '62657947', '-', 'IKZF3', 'chr17', '37949186', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A250-01A', '', '4', '1', 'In-frame', 'Intra-chr', '17q24.1', '17q12', '', '', '', '', '', '', ''), ('41924', 'PRADA', 'PDK2_CDK12', 'PDK2', 'chr17', '48182806', '+', 'CDK12', 'chr17', '37627132', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A250-01A', '', '24', '1', 'In-frame', 'Intra-chr', '17q21.33', '17q12', 'Kinase', '', '', '', '', '', ''), ('41925', 'PRADA', 'FUT10_GAB2', 'FUT10', 'chr8', '33310734', '-', 'GAB2', 'chr11', '77961446', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A250-01A', '', '49', '1', 'In-frame', 'Inter-chr', '8p12', '11q14.1', '', '', '', '', '', '', ''), ('41926', 'PRADA', 'IKZF3_BCAS3', 'IKZF3', 'chr17', '37933904', '-', 'BCAS3', 'chr17', '58945937', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A250-01A', '', '10', '1', 'Out-of-frame', 'Intra-chr', '17q12', '17q23.2', '', '', '', '', '', '', ''), ('41927', 'PRADA', 'PRUNE2_GNAQ', 'PRUNE2', 'chr9', '79438548', '-', 'GNAQ', 'chr9', '80412564', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A251-01A', '', '2', '1', 'Out-of-frame', 'Intra-chr', '9q21.2', '9q21.2', '', '', '', '', '', '', ''), ('41928', 'PRADA', 'MAP3K4_FNDC1', 'MAP3K4', 'chr6', '161471011', '+', 'FNDC1', 'chr6', '159618463', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A251-01A', '', '40', '4', 'Out-of-frame', 'Intra-chr', '6q26', '6q25.3', '', '', '', '', '', '', ''), ('41929', 'PRADA', 'PRPSAP1_ST6GALNAC2', 'PRPSAP1', 'chr17', '74344610', '-', 'ST6GALNAC2', 'chr17', '74574898', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A251-01A', '', '16', '1', 'Out-of-frame', 'Intra-chr', '17q25.1', '17q25.1', '', '', '', '', '', '', ''), ('41930', 'PRADA', 'ELK3_AMDHD1', 'ELK3', 'chr12', '96617551', '+', 'AMDHD1', 'chr12', '96346495', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A251-01A', '', '16', '2', 'Out-of-frame', 'Intra-chr', '12q23.1', '12q23.1', '', '', '', '', '', '', ''), ('41931', 'PRADA', 'NF1_CLTC', 'NF1', 'chr17', '29563039', '+', 'CLTC', 'chr17', '57721637', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A252-01A', '', '22', '1', 'Out-of-frame', 'Intra-chr', '17q11.2', '17q23.1', '', '', '', '', '', '', ''), ('41932', 'PRADA', 'MED13_TANC2', 'MED13', 'chr17', '60042367', '-', 'TANC2', 'chr17', '61151304', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A252-01A', '', '3', '1', 'Out-of-frame', 'Intra-chr', '17q23.2', '17q23.3', '', '', '', '', '', '', ''), ('41933', 'PRADA', 'GTF2B_BPI', 'GTF2B', 'chr1', '89357166', '-', 'BPI', 'chr20', '36959450', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A254-01A', '', '59', '3', 'In-frame', 'Inter-chr', '1p22.2', '20q11.23', '', '', '', '', 'Transcription_Factor', '', ''), ('41934', 'PRADA', 'ERBB2_SLC29A3', 'ERBB2', 'chr17', '37883256', '+', 'SLC29A3', 'chr10', '73121711', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A254-01A', '', '724', '3', 'Out-of-frame', 'Inter-chr', '17q12', '10q22.1', 'Kinase', '', '', '', '', '', ''), ('41935', 'PRADA', 'CHM_ABCB7', 'CHM', 'chrX', '85282495', '-', 'ABCB7', 'chrX', '74334666', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A255-01A', '', '6', '1', 'Out-of-frame', 'Intra-chr', 'Xq21.2', 'Xq13.3', '', '', '', '', '', '', ''), ('41936', 'PRADA', 'C16orf62_TMC5', 'C16orf62', 'chr16', '19603196', '+', 'TMC5', 'chr16', '19505584', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A256-01A', '', '2', '2', 'Out-of-frame', 'Intra-chr', '16p12.3', '16p12.3', '', '', '', '', '', '', ''), ('41937', 'PRADA', 'WWP2_TSEN54', 'WWP2', 'chr16', '69820983', '+', 'TSEN54', 'chr17', '73517490', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A256-01A', '', '12', '1', 'Out-of-frame', 'Inter-chr', '16q22.1', '17q25.1', '', '', '', '', '', '', ''), ('41938', 'PRADA', 'TIA1_TGFA', 'TIA1', 'chr2', '70475537', '-', 'TGFA', 'chr2', '70692865', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A256-01A', '', '38', '2', 'Out-of-frame', 'Intra-chr', '2p13.3', '2p13.3', '', '', '', '', '', '', ''), ('41939', 'PRADA', 'CA3_MYBL1', 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'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A256-01A', '', '57', '2', 'Out-of-frame', 'Inter-chr', '11q24.3', '7q31.2', '', '', '', '', '', '', ''), ('41952', 'PRADA', 'WDPCP_VPS54', 'WDPCP', 'chr2', '63660879', '-', 'VPS54', 'chr2', '64176297', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A256-01A', '', '4', '1', 'Out-of-frame', 'Intra-chr', '2p15', '2p14', '', '', '', '', '', '', ''), ('41953', 'PRADA', 'C17orf76_PEMT', 'C17orf76', 'chr17', '16395059', '-', 'PEMT', 'chr17', '17480341', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A2LJ-01A', '', '73', '1', 'In-frame', 'Intra-chr', '17p11.2', '17p11.2', '', '', '', '', '', '', ''), ('41954', 'PRADA', 'MLLT6_KIRREL3', 'MLLT6', 'chr17', '36865828', '+', 'KIRREL3', 'chr11', '126343361', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A2LJ-01A', '', '8', '1', 'Out-of-frame', 'Inter-chr', '17q12', '11q24.2', '', '', '', '', '', '', ''), ('41955', 'PRADA', 'UVRAG_KIRREL3', 'UVRAG', 'chr11', '75728024', '+', 'KIRREL3', 'chr11', '126432807', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A2LJ-01A', '', '14', '1', 'Out-of-frame', 'Intra-chr', '11q13.5', '11q24.2', '', '', '', '', '', '', ''), ('41956', 'PRADA', 'NCOR1_ACER3', 'NCOR1', 'chr17', '15995177', '-', 'ACER3', 'chr11', '76637601', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A2LJ-01A', '', '25', '1', 'In-frame', 'Inter-chr', '17p12', '11q13.5', '', '', '', '', '', '', ''), ('41957', 'PRADA', 'IKBKB_FADD', 'IKBKB', 'chr8', '42166543', '+', 'FADD', 'chr11', '70052239', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A2LK-01A', '', '39', '3', 'Out-of-frame', 'Inter-chr', '8p11.21', '11q13.3', '', '', '', '', '', '', ''), ('41958', 'PRADA', 'ST8SIA1_IFLTD1', 'ST8SIA1', 'chr12', '22401940', '-', 'IFLTD1', 'chr12', '25702480', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A2LM-01A', '', '4', '2', 'In-frame', 'Intra-chr', '12p12.1', '12p12.1', '', '', '', '', '', '', ''), ('41959', 'PRADA', 'UAP1_BCL9', 'UAP1', 'chr1', '162536138', '+', 'BCL9', 'chr1', '147090622', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A2LR-01A', '', '19', '1', 'Out-of-frame', 'Intra-chr', '1q23.3', '1q21.2', '', '', '', '', '', '', ''), ('41960', 'PRADA', 'LSAMP_GAP43', 'LSAMP', 'chr3', '117716029', '-', 'GAP43', 'chr3', '115394860', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A2LR-01A', '', '2', '1', 'Out-of-frame', 'Intra-chr', '3q13.32', '3q13.31', '', '', '', '', '', '', ''), ('41961', 'PRADA', 'AGAP1_FAM164A', 'AGAP1', 'chr2', '236403493', '+', 'FAM164A', 'chr8', '79627456', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A2LR-01A', '', '6', '1', 'Out-of-frame', 'Inter-chr', '2q37.2', '8q21.12', '', '', '', '', '', '', ''), ('41962', 'PRADA', 'CLCN3_UBE2D3', 'CLCN3', 'chr4', '170557239', '+', 'UBE2D3', 'chr4', '103731012', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A2LR-01A', '', '4', '1', 'Out-of-frame', 'Intra-chr', '4q33', '4q24', '', '', '', '', '', '', ''), ('41963', 'PRADA', 'BCL3_IGSF23', 'BCL3', 'chr19', '45252303', '+', 'IGSF23', 'chr19', '45138701', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A2LR-01A', '', '2', '2', 'Out-of-frame', 'Intra-chr', '19q13.32', '19q13.31', '', '', '', '', '', '', ''), ('41964', 'PRADA', 'CCNY_AKAP10', 'CCNY', 'chr10', '35626135', '+', 'AKAP10', 'chr17', '19871774', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A2LR-01A', '', '6', '1', 'In-frame', 'Inter-chr', '10p11.21', '17p11.2', '', '', '', '', '', '', ''), ('41965', 'PRADA', 'ZMYM4_UTP11L', 'ZMYM4', 'chr1', '35791006', '+', 'UTP11L', 'chr1', '38488371', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A2LR-01A', '', '20', '2', 'Out-of-frame', 'Intra-chr', '1p34.3', '1p34.3', '', '', '', '', '', '', ''), ('41966', 'PRADA', 'RORA_NUP210L', 'RORA', 'chr15', '61521252', '-', 'NUP210L', 'chr1', '154076686', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A2LR-01A', '', '2', '2', 'Out-of-frame', 'Inter-chr', '15q22.2', '1q21.3', '', '', '', '', '', '', ''), ('41967', 'PRADA', 'COPS3_TEKT3', 'COPS3', 'chr17', '17163615', '-', 'TEKT3', 'chr17', '15217547', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A5QN-01A', '', '15', '1', 'Out-of-frame', 'Intra-chr', '17p11.2', '17p12', '', '', '', '', '', '', ''), ('41968', 'PRADA', 'ADPRHL2_SHPK', 'ADPRHL2', 'chr1', '36554716', '+', 'SHPK', 'chr17', '3533640', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A5QP-01A', '', '9', '2', 'Out-of-frame', 'Inter-chr', '1p34.3', '17p13.2', '', '', '', '', '', '', ''), ('41969', 'PRADA', 'RAB3GAP1_ACMSD', 'RAB3GAP1', 'chr2', '135851263', '+', 'ACMSD', 'chr2', '135655911', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-AR-A5QQ-01A', '', '2', '1', 'Out-of-frame', 'Intra-chr', '2q21.3', '2q21.3', '', '', '', '', '', '', ''), ('41970', 'PRADA', 'ELF5_CAT', 'ELF5', 'chr11', '34515026', '-', 'CAT', 'chr11', '34485652', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I1-01A', '', '13', '2', 'In-frame', 'Intra-chr', '11p13', '11p13', '', '', '', '', '', '', ''), ('41971', 'PRADA', 'FRMD8_MAST1', 'FRMD8', 'chr11', '65164491', '+', 'MAST1', 'chr19', '12969176', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I1-01A', '', '13', '1', 'Out-of-frame', 'Inter-chr', '11q13.1', '19p13.2', '', '', '', '', '', '', ''), ('41972', 'PRADA', 'WRN_ADAM9', 'WRN', 'chr8', '30982516', '+', 'ADAM9', 'chr8', '38871484', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I1-01A', '', '4', '1', 'In-frame', 'Intra-chr', '8p12', '8p11.22', '', '', '', '', '', '', ''), ('41973', 'PRADA', 'MAN1A2_TTF2', 'MAN1A2', 'chr1', '117963271', '+', 'TTF2', 'chr1', '117639973', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I1-01A', '', '6', '1', 'In-frame', 'Intra-chr', '1p12', '1p13.1', '', '', '', '', '', '', ''), ('41974', 'PRADA', 'SCARB1_DHX37', 'SCARB1', 'chr12', '125348141', '-', 'DHX37', 'chr12', '125462036', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I1-01A', '', '24', '1', 'In-frame', 'Intra-chr', '12q24.31', '12q24.31', '', '', '', '', '', '', ''), ('41975', 'PRADA', 'TUT1_BSCL2', 'TUT1', 'chr11', '62356503', '-', 'BSCL2', 'chr11', '62462183', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I1-01A', '', '258', '2', 'In-frame', 'Intra-chr', '11q12.3', '11q12.3', '', '', '', '', '', '', ''), ('41976', 'PRADA', 'IFFO2_UBR4', 'IFFO2', 'chr1', '19282162', '-', 'UBR4', 'chr1', '19411192', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I1-01A', '', '2', '1', 'In-frame', 'Intra-chr', '1p36.13', '1p36.13', '', '', '', '', '', '', ''), ('41977', 'PRADA', 'GMDS_C6orf186', 'GMDS', 'chr6', '1930337', '-', 'C6orf186', 'chr6', '110644075', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I1-01A', '', '4', '2', 'In-frame', 'Intra-chr', '6p25.3', '6q21', '', '', '', '', '', '', ''), ('41978', 'PRADA', 'WBP2NL_MEI1', 'WBP2NL', 'chr22', '42394884', '+', 'MEI1', 'chr22', '42172106', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I1-01A', '', '8', '1', 'Out-of-frame', 'Intra-chr', '22q13.2', '22q13.2', '', '', '', '', '', '', ''), ('41979', 'PRADA', 'ATP6V0A1_ATF6', 'ATP6V0A1', 'chr17', '40613029', '+', 'ATF6', 'chr1', '161832988', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I1-01A', '', '9', '1', 'Out-of-frame', 'Inter-chr', '17q21.2', '1q23.3', '', '', '', '', '', '', ''), ('41980', 'PRADA', 'PRRG2_CCDC155', 'PRRG2', 'chr19', '50086974', '+', 'CCDC155', 'chr19', '49912224', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I1-01A', '', '4', '3', 'In-frame', 'Intra-chr', '19q13.33', '19q13.33', '', '', '', '', '', '', ''), ('41981', 'PRADA', 'MRPL11_ST8SIA1', 'MRPL11', 'chr11', '66204575', '-', 'ST8SIA1', 'chr12', '22402032', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I2-01A', '', '20', '1', 'In-frame', 'Inter-chr', '11q13.2', '12p12.1', '', '', '', '', '', '', ''), ('41982', 'PRADA', 'ASTN2_PNMT', 'ASTN2', 'chr9', '120053605', '-', 'PNMT', 'chr17', '37825882', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I9-01A', '', '90', '1', 'Out-of-frame', 'Inter-chr', '9q33.1', '17q12', '', '', '', '', '', '', ''), ('41983', 'PRADA', 'FSD1L_ADAMTS13', 'FSD1L', 'chr9', '108210516', '+', 'ADAMTS13', 'chr9', '136313720', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I9-01A', '', '31', '1', 'Out-of-frame', 'Intra-chr', '9q31.2', '9q34.2', '', '', '', '', '', '', ''), ('41984', 'PRADA', 'ORMDL3_ZPBP2', 'ORMDL3', 'chr17', '38080283', '-', 'ZPBP2', 'chr17', '38026947', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I9-01A', '', '189', '4', 'Out-of-frame', 'Intra-chr', '17q12', '17q12', '', '', '', '', '', '', ''), ('41985', 'PRADA', 'BPTF_PITPNC1', 'BPTF', 'chr17', '65850878', '+', 'PITPNC1', 'chr17', '65665624', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I9-01A', '', '11', '1', 'Out-of-frame', 'Intra-chr', '17q24.2', '17q24.2', '', '', '', '', 'Transcription_Factor', '', ''), ('41986', 'PRADA', 'TRIM25_MSI2', 'TRIM25', 'chr17', '54972704', '-', 'MSI2', 'chr17', '55607037', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I9-01A', '', '11', '2', 'Out-of-frame', 'Intra-chr', '17q22', '17q22', '', '', '', '', '', '', ''), ('41987', 'PRADA', 'NIPSNAP3A_TMEFF1', 'NIPSNAP3A', 'chr9', '107510133', '+', 'TMEFF1', 'chr9', '103310026', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I9-01A', '', '13', '1', 'Out-of-frame', 'Intra-chr', '9q31.1', '9q31.1', '', '', '', '', '', '', ''), ('41988', 'PRADA', 'NF1_ABCB5', 'NF1', 'chr17', '29676269', '+', 'ABCB5', 'chr7', '20671682', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I9-01A', '', '8', '1', 'In-frame', 'Inter-chr', '17q11.2', '7p21.1', '', '', '', '', '', '', ''), ('41989', 'PRADA', 'RORA_ARNT2', 'RORA', 'chr15', '61521252', '-', 'ARNT2', 'chr15', '80885941', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I9-01A', '', '7', '1', 'Out-of-frame', 'Intra-chr', '15q22.2', '15q25.1', '', '', '', 'Receptor', 'Transcription_Factor', '', ''), ('41990', 'PRADA', 'MARK3_RP11-407N17.3', 'MARK3', 'chr14', '103852417', '+', 'RP11-407N17.3', 'chr14', '39716115', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I9-01A', '', '4', '1', 'In-frame', 'Intra-chr', '14q32.32', '14q21.1', '', '', '', '', '', '', ''), ('41991', 'PRADA', 'SNX13_STAP2', 'SNX13', 'chr7', '17979907', '-', 'STAP2', 'chr19', '4334041', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I9-01A', '', '112', '3', 'In-frame', 'Inter-chr', '7p21.1', '19p13.3', '', '', '', '', '', '', ''), ('41992', 'PRADA', 'MED1_ARHGAP23', 'MED1', 'chr17', '37604051', '-', 'ARHGAP23', 'chr17', '36614346', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0I9-01A', '', '8', '1', 'In-frame', 'Intra-chr', '17q12', '17q12', '', '', '', '', '', '', ''), ('41993', 'PRADA', 'CREBBP_NUBP1', 'CREBBP', 'chr16', '3819175', '-', 'NUBP1', 'chr16', '10846467', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IA-01A', '', '144', '3', 'In-frame', 'Intra-chr', '16p13.3', '16p13.13', '', '', '', '', 'Transcription_Factor', '', ''), ('41994', 'PRADA', 'SEMA3C_AUTS2', 'SEMA3C', 'chr7', '80418622', '-', 'AUTS2', 'chr7', '69900738', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IC-01A', '', '3', '1', 'Out-of-frame', 'Intra-chr', '7q21.11', '7q11.22', '', '', '', '', '', '', ''), ('41995', 'PRADA', 'AC011997.1_LRRC69', 'AC011997.1', 'chr2', '198557940', '+', 'LRRC69', 'chr8', '92212841', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IE-01A', '', '2', '1', 'Out-of-frame', 'Inter-chr', '2q33.1', '8q21.3', '', '', '', '', '', '', ''), ('41996', 'PRADA', 'SIL1_STK10', 'SIL1', 'chr5', '138456724', '-', 'STK10', 'chr5', '171583792', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IE-01A', '', '4', '1', 'Out-of-frame', 'Intra-chr', '5q31.2', '5q35.1', '', '', '', '', '', '', ''), ('41997', 'PRADA', 'CLTB_SIL1', 'CLTB', 'chr5', '175837258', '-', 'SIL1', 'chr5', '138287573', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IE-01A', '', '5', '1', 'Out-of-frame', 'Intra-chr', '5q35.2', '5q31.2', '', '', '', '', '', '', ''), ('41998', 'PRADA', 'PRRG4_RAPGEFL1', 'PRRG4', 'chr11', '32852178', '+', 'RAPGEFL1', 'chr17', '38345118', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IG-01A', '', '38', '2', 'Out-of-frame', 'Inter-chr', '11p13', '17q21.1', '', '', '', '', '', '', ''), ('41999', 'PRADA', 'KDM2A_RHOD', 'KDM2A', 'chr11', '67018269', '+', 'RHOD', 'chr11', '66833367', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IG-01A', '', '86', '3', 'Out-of-frame', 'Intra-chr', '11q13.2', '11q13.2', '', '', '', '', '', '', ''), ('42000', 'PRADA', 'FAM111B_MS4A5', 'FAM111B', 'chr11', '58877179', '+', 'MS4A5', 'chr11', '60198269', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IG-01A', '', '159', '4', 'In-frame', 'Intra-chr', '11q12.1', '11q12.2', '', '', '', '', '', '', ''), ('42001', 'PRADA', 'MED24_CEP95', 'MED24', 'chr17', '38209551', '-', 'CEP95', 'chr17', '62517520', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IG-01A', '', '39', '3', 'Out-of-frame', 'Intra-chr', '17q21.1', '17q23.3', '', '', '', '', '', '', ''), ('42002', 'PRADA', 'ERC1_PIK3C2G', 'ERC1', 'chr12', '1299218', '+', 'PIK3C2G', 'chr12', '18641383', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IG-01A', '', '19', '2', 'In-frame', 'Intra-chr', '12p13.33', '12p12.3', '', '', '', '', '', '', ''), ('42003', 'PRADA', 'EZH1_TOP2A', 'EZH1', 'chr17', '40854895', '-', 'TOP2A', 'chr17', '38561135', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IG-01A', '', '5', '2', 'Out-of-frame', 'Intra-chr', '17q21.2', '17q21.2', '', '', '', '', '', '', ''), ('42004', 'PRADA', 'SON_C10orf11', 'SON', 'chr21', '34932081', '+', 'C10orf11', 'chr10', '78084159', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IH-01A', '', '6', '1', 'In-frame', 'Inter-chr', '21q22.11', '10q22.3', '', '', '', '', '', '', ''), ('42005', 'PRADA', 'AFF3_TMEM182', 'AFF3', 'chr2', '100209657', '-', 'TMEM182', 'chr2', '103379046', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IH-01A', '', '3', '1', 'In-frame', 'Intra-chr', '2q11.2', '2q12.1', '', '', '', '', '', '', ''), ('42006', 'PRADA', 'TAB3_DMD', 'TAB3', 'chrX', '30877604', '-', 'DMD', 'chrX', '31241238', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IJ-01A', '', '11', '1', 'Out-of-frame', 'Intra-chr', 'Xp21.2', 'Xp21.2', '', '', '', '', '', '', ''), ('42007', 'PRADA', 'TRIB1_NSMCE2', 'TRIB1', 'chr8', '126443504', '+', 'NSMCE2', 'chr8', '126369461', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IJ-01A', '', '14', '1', 'Out-of-frame', 'Intra-chr', '8q24.13', '8q24.13', 'Kinase', '', '', '', 'Transcription_Factor', '', ''), ('42008', 'PRADA', 'LTN1_RWDD2B', 'LTN1', 'chr21', '30365085', '-', 'RWDD2B', 'chr21', '30380942', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IJ-01A', '', '6', '1', 'Out-of-frame', 'Intra-chr', '21q21.3', '21q21.3', '', '', '', '', '', '', ''), ('42009', 'PRADA', 'MTA1_PACS2', 'MTA1', 'chr14', '105886400', '+', 'PACS2', 'chr14', '105814830', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IJ-01A', '', '4', '1', 'Out-of-frame', 'Intra-chr', '14q32.33', '14q32.33', '', '', '', '', '', '', ''), ('42010', 'PRADA', 'GIGYF2_EFHD1', 'GIGYF2', 'chr2', '233613792', '+', 'EFHD1', 'chr2', '233537019', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IJ-01A', '', '204', '1', 'In-frame', 'Intra-chr', '2q37.1', '2q37.1', '', '', '', '', '', '', ''), ('42011', 'PRADA', 'PICK1_POLR2F', 'PICK1', 'chr22', '38453857', '+', 'POLR2F', 'chr22', '38352780', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IJ-01A', '', '27', '1', 'In-frame', 'Intra-chr', '22q13.1', '22q13.1', '', '', '', '', '', '', ''), ('42012', 'PRADA', 'ZNF148_FHAD1', 'ZNF148', 'chr3', '125006947', '-', 'FHAD1', 'chr1', '15689138', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IJ-01A', '', '9', '2', 'Out-of-frame', 'Inter-chr', '3q21.2', '1p36.21', '', '', '', '', '', '', ''), ('42013', 'PRADA', 'UVRAG_DGAT2', 'UVRAG', 'chr11', '75526569', '+', 'DGAT2', 'chr11', '75507373', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IK-01A', '', '11', '1', 'In-frame', 'Intra-chr', '11q13.5', '11q13.5', '', '', '', '', '', '', ''), ('42014', 'PRADA', 'USP32_BCAS3', 'USP32', 'chr17', '58422842', '-', 'BCAS3', 'chr17', '58885365', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IK-01A', '', '2', '1', 'Out-of-frame', 'Intra-chr', '17q23.2', '17q23.2', '', '', '', '', 'Transcription_Factor', '', ''), ('42015', 'PRADA', 'RNF216_ST14', 'RNF216', 'chr7', '5751392', '-', 'ST14', 'chr11', '130058009', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IM-01A', '', '58', '1', 'In-frame', 'Inter-chr', '7p22.1', '11q24.3', '', '', '', '', '', '', ''), ('42016', 'PRADA', 'MYO9A_CRAMP1L', 'MYO9A', 'chr15', '72338065', '-', 'CRAMP1L', 'chr16', '1682213', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IM-01A', '', '19', '1', 'In-frame', 'Inter-chr', '15q23', '16p13.3', '', '', '', '', '', '', ''), ('42017', 'PRADA', 'MED13_ITGA3', 'MED13', 'chr17', '60059559', '-', 'ITGA3', 'chr17', '48141441', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IN-01A', '', '9', '1', 'Out-of-frame', 'Intra-chr', '17q23.2', '17q21.33', '', '', '', '', 'Transcription_Factor', '', ''), ('42018', 'PRADA', 'BCAS3_APPBP2', 'BCAS3', 'chr17', '59067596', '+', 'APPBP2', 'chr17', '58577848', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IN-01A', '', '4', '1', 'Out-of-frame', 'Intra-chr', '17q23.2', '17q23.2', '', '', '', '', '', '', ''), ('42019', 'PRADA', 'JHDM1D_SND1', 'JHDM1D', 'chr7', '139793856', '-', 'SND1', 'chr7', '127631000', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IN-01A', '', '2', '2', 'Out-of-frame', 'Intra-chr', '7q34', '7q32.1', '', '', '', '', '', '', ''), ('42020', 'PRADA', 'RARA_SKAP1', 'RARA', 'chr17', '38487648', '+', 'SKAP1', 'chr17', '46214699', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IN-01A', '', '232', '5', 'Out-of-frame', 'Intra-chr', '17q21.2', '17q21.32', '', '', '', '', '', '', ''), ('42021', 'PRADA', 'C15orf42_ATXN7L1', 'C15orf42', 'chr15', '90119471', '+', 'ATXN7L1', 'chr7', '105264714', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IO-01A', '', '2', '1', 'Out-of-frame', 'Inter-chr', '15q26.1', '7q22.3', '', '', '', '', '', '', ''), ('42022', 'PRADA', 'COMMD10_DGKI', 'COMMD10', 'chr5', '115469875', '+', 'DGKI', 'chr7', '137076082', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IO-01A', '', '3', '1', 'In-frame', 'Inter-chr', '5q23.1', '7q33', '', '', '', '', '', '', ''), ('42023', 'PRADA', 'BBS4_TTC23', 'BBS4', 'chr15', '73024067', '+', 'TTC23', 'chr15', '99762069', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IO-01A', '', '11', '1', 'Out-of-frame', 'Intra-chr', '15q24.1', '15q26.3', '', '', '', '', '', '', ''), ('42024', 'PRADA', 'ESRRG_ACBD3', 'ESRRG', 'chr1', '216850418', '-', 'ACBD3', 'chr1', '226353701', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IQ-01A', '', '3', '1', 'In-frame', 'Intra-chr', '1q41', '1q42.12', '', '', '', '', '', '', ''), ('42025', 'PRADA', 'NFIA_LTV1', 'NFIA', 'chr1', '61743257', '+', 'LTV1', 'chr6', '144167188', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IQ-01A', '', '8', '1', 'Out-of-frame', 'Inter-chr', '1p31.3', '6q24.2', '', '', '', '', '', '', ''), ('42026', 'PRADA', 'ZNF823_VAV1', 'ZNF823', 'chr19', '11849632', '-', 'VAV1', 'chr19', '6820713', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IQ-01A', '', '4', '1', 'In-frame', 'Intra-chr', '19p13.2', '19p13.3', '', '', '', '', '', '', ''), ('42027', 'PRADA', 'MAP7_ARG1', 'MAP7', 'chr6', '136871480', '-', 'ARG1', 'chr6', '131904200', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IQ-01A', '', '5', '2', 'Out-of-frame', 'Intra-chr', '6q23.3', '6q23.2', '', '', '', '', '', '', ''), ('42028', 'PRADA', 'PEX7_MED23', 'PEX7', 'chr6', '137219379', '+', 'MED23', 'chr6', '131895435', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IQ-01A', '', '12', '1', 'In-frame', 'Intra-chr', '6q23.3', '6q23.2', '', '', '', '', '', '', ''), ('42029', 'PRADA', 'MAP7_CNKSR3', 'MAP7', 'chr6', '136686873', '-', 'CNKSR3', 'chr6', '154771392', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IQ-01A', '', '2', '1', 'In-frame', 'Intra-chr', '6q23.3', '6q25.2', '', '', '', '', '', '', ''), ('42030', 'PRADA', 'ILVBL_SYDE1', 'ILVBL', 'chr19', '15226963', '-', 'SYDE1', 'chr19', '15219867', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IQ-01A', '', '6', '2', 'In-frame', 'Intra-chr', '19p13.12', '19p13.12', '', '', '', '', '', '', ''), ('42031', 'PRADA', 'PBX1_CTNNA3', 'PBX1', 'chr1', '164781386', '+', 'CTNNA3', 'chr10', '68535282', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IQ-01A', '', '33', '1', 'Out-of-frame', 'Inter-chr', '1q23.3', '10q21.3', '', '', '', '', '', '', ''), ('42032', 'PRADA', 'SIPA1L2_ZNF252', 'SIPA1L2', 'chr1', '232607117', '-', 'ZNF252', 'chr8', '146203939', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0IQ-01A', '', '3', '2', 'Out-of-frame', 'Inter-chr', '1q42.2', '8q24.3', '', '', '', '', '', '', ''), ('42033', 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'chr12', '117426674', '+', 'CHST11', 'chr12', '104995684', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0RH-01A', '', '2', '1', 'Out-of-frame', 'Intra-chr', '12q24.22', '12q23.3', '', '', '', '', '', '', ''), ('42038', 'PRADA', 'CLPB_C2CD3', 'CLPB', 'chr11', '72040751', '-', 'C2CD3', 'chr11', '73817538', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0RL-01A', '', '5', '1', 'In-frame', 'Intra-chr', '11q13.4', '11q13.4', '', '', '', '', '', '', ''), ('42039', 'PRADA', 'HEATR3_CHRNB3', 'HEATR3', 'chr16', '50100450', '+', 'CHRNB3', 'chr8', '42585737', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0RM-01A', '', '3', '2', 'Out-of-frame', 'Inter-chr', '16q12.1', '8p11.21', '', '', '', '', '', '', ''), ('42040', 'PRADA', 'SPTAN1_AUH', 'SPTAN1', 'chr9', '131331176', '+', 'AUH', 'chr9', '94087686', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0RM-01A', '', '14', '1', 'Out-of-frame', 'Intra-chr', '9q34.11', '9q22.31', '', '', '', '', '', '', ''), ('42041', 'PRADA', 'PPP2R5C_UPF2', 'PPP2R5C', 'chr14', '102252520', '+', 'UPF2', 'chr10', '12001355', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0RS-01A', '', '7', '2', 'Out-of-frame', 'Inter-chr', '14q32.31', '10p14', '', '', '', '', '', '', ''), ('42042', 'PRADA', 'RASAL2_ZNF695', 'RASAL2', 'chr1', '178063829', '+', 'ZNF695', 'chr1', '247109129', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0RS-01A', '', '2', '1', 'Out-of-frame', 'Intra-chr', '1q25.2', '1q44', '', '', '', '', '', '', ''), ('42043', 'PRADA', 'TBCK_USP10', 'TBCK', 'chr4', '107016639', '-', 'USP10', 'chr16', '84806147', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0RS-01A', '', '5', '1', 'In-frame', 'Inter-chr', '4q24', '16q24.1', 'Kinase', '', '', '', '', '', ''), ('42044', 'PRADA', 'BCL2L11_ACOXL', 'BCL2L11', 'chr2', '111881716', '+', 'ACOXL', 'chr2', '111875193', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0RS-01A', '', '11', '1', 'Out-of-frame', 'Intra-chr', '2q13', '2q13', '', '', '', '', '', '', ''), ('42045', 'PRADA', 'PAM16_CORO7', 'PAM16', 'chr16', '4401233', '-', 'CORO7', 'chr16', '4415546', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0RT-01A', '', '9', '1', 'Out-of-frame', 'Intra-chr', '16p13.3', '16p13.3', '', '', '', '', '', '', ''), ('42046', 'PRADA', 'SCCPDH_CNST', 'SCCPDH', 'chr1', '246890306', '+', 'CNST', 'chr1', '246823501', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0RT-01A', '', '10', '1', 'In-frame', 'Intra-chr', '1q44', '1q44', '', '', '', '', '', '', ''), ('42047', 'PRADA', 'PITPNM1_CABP2', 'PITPNM1', 'chr11', '67267194', '-', 'CABP2', 'chr11', '67287631', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0RT-01A', '', '12', '1', 'In-frame', 'Intra-chr', '11q13.2', '11q13.2', '', '', '', '', '', '', ''), ('42048', 'PRADA', 'SCAI_PPP6C', 'SCAI', 'chr9', '127904912', '-', 'PPP6C', 'chr9', '127912200', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0RT-01A', '', '18', '1', 'Out-of-frame', 'Intra-chr', '9q33.3', '9q33.3', '', '', '', '', '', '', ''), ('42049', 'PRADA', 'IFT74_LDLRAD3', 'IFT74', 'chr9', '26962085', '+', 'LDLRAD3', 'chr11', '36248635', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0RT-01A', '', '4', '1', 'Out-of-frame', 'Inter-chr', '9p21.2', '11p13', '', '', '', '', '', '', ''), ('42050', 'PRADA', 'SLTM_UACA', 'SLTM', 'chr15', '59204762', '-', 'UACA', 'chr15', '70991999', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0RT-01A', '', '18', '3', 'In-frame', 'Intra-chr', '15q22.1', '15q23', '', '', '', '', '', '', ''), ('42051', 'PRADA', 'HPN_PPP2R5C', 'HPN', 'chr19', '35533426', '+', 'PPP2R5C', 'chr14', '102302506', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0RT-01A', '', '12', '2', 'Out-of-frame', 'Inter-chr', '19q13.12', '14q32.31', '', '', '', '', '', '', ''), ('42052', 'PRADA', 'ETFB_LIM2', 'ETFB', 'chr19', '51857404', '-', 'LIM2', 'chr19', '51883893', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0RT-01A', '', '78', '1', 'Out-of-frame', 'Intra-chr', '19q13.41', '19q13.41', '', '', '', '', '', '', ''), ('42053', 'PRADA', 'PPP1CB_BRE', 'PPP1CB', 'chr2', '28975042', '+', 'BRE', 'chr2', '28152699', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0RT-01A', '', '61', '2', 'Out-of-frame', 'Intra-chr', '2p23.2', '2p23.2', '', '', '', '', '', '', ''), ('42054', 'PRADA', 'PPP2R5C_SCN1B', 'PPP2R5C', 'chr14', '102276373', '+', 'SCN1B', 'chr19', '35523432', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0RT-01A', '', '17', '2', 'In-frame', 'Inter-chr', '14q32.31', '19q13.12', '', '', '', '', '', '', ''), ('42055', 'PRADA', 'RNF111_TCF12', 'RNF111', 'chr15', '59359282', '+', 'TCF12', 'chr15', '57383987', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0RT-01A', '', '5', '1', 'In-frame', 'Intra-chr', '15q22.2', '15q21.3', '', '', '', '', '', '', ''), ('42056', 'PRADA', 'CHD9_RAD51B', 'CHD9', 'chr16', '53191453', '+', 'RAD51B', 'chr14', '68758601', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0RU-01A', '', '6', '2', 'In-frame', 'Inter-chr', '16q12.2', '14q24.1', '', '', '', '', '', '', ''), ('42057', 'PRADA', 'TTC6_MIPOL1', 'TTC6', 'chr14', '38092208', '+', 'MIPOL1', 'chr14', '37892060', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0WS-01A', '', '10', '1', 'In-frame', 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'Intra-chr', '11p15.5', '11p15.5', '', '', '', '', 'Transcription_Factor', '', ''), ('42066', 'PRADA', 'ASAP1_KCNH1', 'ASAP1', 'chr8', '131088594', '-', 'KCNH1', 'chr1', '210977508', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0X1-01A', '', '6', '1', 'In-frame', 'Inter-chr', '8q24.21', '1q32.2', '', '', '', '', '', '', ''), ('42067', 'PRADA', 'TNFRSF11A_KIAA1468', 'TNFRSF11A', 'chr18', '60036717', '+', 'KIAA1468', 'chr18', '59954584', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0X1-01A', '', '3', '1', 'In-frame', 'Intra-chr', '18q21.33', '18q21.33', '', '', '', '', '', '', ''), ('42068', 'PRADA', 'HSD17B3_ENPP2', 'HSD17B3', 'chr9', '99060698', '-', 'ENPP2', 'chr8', '120638960', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0X1-01A', '', '2', '1', 'Out-of-frame', 'Inter-chr', '9q22.32', '8q24.12', '', '', '', '', 'Transcription_Factor', '', ''), ('42069', 'PRADA', 'NEXN_AK5', 'NEXN', 'chr1', '78399164', '+', 'AK5', 'chr1', '77949002', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0X1-01A', '', '33', '1', 'In-frame', 'Intra-chr', '1p31.1', '1p31.1', 'Kinase', '', '', '', '', '', ''), ('42070', 'PRADA', 'TBCE_TBC1D22A', 'TBCE', 'chr1', '235543464', '+', 'TBC1D22A', 'chr22', '47507404', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0X1-01A', '', '8', '1', 'Out-of-frame', 'Inter-chr', '1q42.3', '22q13.31', '', '', '', '', '', '', ''), ('42071', 'PRADA', 'ST5_DENND5A', 'ST5', 'chr11', '8772168', '-', 'DENND5A', 'chr11', '9163655', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0X1-01A', '', '7', '1', 'Out-of-frame', 'Intra-chr', '11p15.4', '11p15.4', '', '', '', '', '', '', ''), ('42072', 'PRADA', 'AC011997.1_LRRC69', 'AC011997.1', 'chr2', '198557940', '+', 'LRRC69', 'chr8', '92212841', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0X5-01A', '', '3', '1', 'Out-of-frame', 'Inter-chr', '2q33.1', '8q21.3', '', '', '', '', '', '', ''), ('42073', 'PRADA', 'ALX4_STK33', 'ALX4', 'chr11', '44289044', '-', 'STK33', 'chr11', '8414257', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A0X7-01A', '', '5', '1', 'In-frame', 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'5p15.31', '5p15.31', '', '', '', '', '', '', ''), ('42082', 'PRADA', 'ARHGEF10L_PADI4', 'ARHGEF10L', 'chr1', '17983203', '+', 'PADI4', 'chr1', '17657464', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A3ZX-01A', '', '14', '1', 'Out-of-frame', 'Intra-chr', '1p36.13', '1p36.13', '', '', '', '', '', '', ''), ('42083', 'PRADA', 'PRKAR2A_SLC25A20', 'PRKAR2A', 'chr3', '48884768', '-', 'SLC25A20', 'chr3', '48929505', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A3ZX-01A', '', '2', '1', 'Out-of-frame', 'Intra-chr', '3p21.31', '3p21.31', 'Kinase', '', '', '', '', '', ''), ('42084', 'PRADA', 'DZIP1_PCCA', 'DZIP1', 'chr13', '96293549', '-', 'PCCA', 'chr13', '100982815', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A400-01A', '', '2', '1', 'Out-of-frame', 'Intra-chr', '13q32.1', '13q32.3', '', '', '', '', '', '', ''), ('42085', 'PRADA', 'PCNT_MCOLN1', 'PCNT', 'chr21', '47811291', '+', 'MCOLN1', 'chr19', '7598409', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A402-01A', '', '11', '1', 'Out-of-frame', 'Inter-chr', '21q22.3', '19p13.2', '', '', '', '', '', '', ''), ('42086', 'PRADA', 'PAWR_PTPRR', 'PAWR', 'chr12', '80083509', '-', 'PTPRR', 'chr12', '71092129', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A408-01A', '', '13', '3', 'In-frame', 'Intra-chr', '12q21.2', '12q15', '', '', '', '', '', '', ''), ('42087', 'PRADA', 'C1orf123_ALG6', 'C1orf123', 'chr1', '53685933', '-', 'ALG6', 'chr1', '63862184', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-B6-A409-01A', '', '5', '1', 'Out-of-frame', 'Intra-chr', '1p32.3', '1p31.3', '', '', '', '', '', '', ''), ('42088', 'PRADA', 'ALG14_NRD1', 'ALG14', 'chr1', '95530422', '-', 'NRD1', 'chr1', '52276076', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0AU-01A', '', '14', '1', 'In-frame', 'Intra-chr', '1p21.3', '1p32.3', '', '', '', '', '', '', ''), ('42089', 'PRADA', 'ARID3A_PMEPA1', 'ARID3A', 'chr19', '968503', '+', 'PMEPA1', 'chr20', '56234753', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0AU-01A', '', '16', '1', 'In-frame', 'Inter-chr', '19p13.3', '20q13.31', '', '', '', '', '', '', ''), ('42090', 'PRADA', 'ARHGEF17_EP300', 'ARHGEF17', 'chr11', '73022875', '+', 'EP300', 'chr22', '41545042', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0AU-01A', '', '22', '1', 'In-frame', 'Inter-chr', '11q13.4', '22q13.2', '', '', '', '', '', '', ''), ('42091', 'PRADA', 'HIRA_CABIN1', 'HIRA', 'chr22', '19371143', '-', 'CABIN1', 'chr22', '24560368', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0AU-01A', '', '9', '1', 'Out-of-frame', 'Intra-chr', '22q11.21', '22q11.23', '', '', '', '', '', '', ''), ('42092', 'PRADA', 'ABR_PITPNA', 'ABR', 'chr17', '973209', '-', 'PITPNA', 'chr17', '1446321', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0AV-01A', '', '6', '1', 'Out-of-frame', 'Intra-chr', '17p13.3', '17p13.3', '', '', '', '', '', '', ''), ('42093', 'PRADA', 'NPTN_CLUAP1', 'NPTN', 'chr15', '73879865', '-', 'CLUAP1', 'chr16', '3580568', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0AV-01A', '', '275', '2', 'In-frame', 'Inter-chr', '15q24.1', '16p13.3', '', '', '', '', '', '', ''), ('42094', 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'BAI2', 'chr1', '32221600', '-', 'SPOCD1', 'chr1', '32259836', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0AV-01A', '', '3', '1', 'Out-of-frame', 'Intra-chr', '1p35.2', '1p35.2', '', '', '', '', '', '', ''), ('42099', 'PRADA', 'EFR3A_ASAP1', 'EFR3A', 'chr8', '133008744', '+', 'ASAP1', 'chr8', '131249240', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0AV-01A', '', '2', '1', 'In-frame', 'Intra-chr', '8q24.22', '8q24.21', '', '', '', '', '', '', ''), ('42100', 'PRADA', 'MED1_ABCC3', 'MED1', 'chr17', '37604051', '-', 'ABCC3', 'chr17', '48733193', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0AW-01A', '', '309', '3', 'In-frame', 'Intra-chr', '17q12', '17q21.33', '', '', '', '', 'Transcription_Factor', '', ''), ('42101', 'PRADA', 'THRA_B4GALNT2', 'THRA', 'chr17', '38233861', '+', 'B4GALNT2', 'chr17', '47236399', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0AW-01A', '', '8', '1', 'In-frame', 'Intra-chr', '17q21.1', '17q21.32', '', '', '', '', '', '', ''), ('42102', 'PRADA', 'NOL11_CARD11', 'NOL11', 'chr17', '65733261', '+', 'CARD11', 'chr7', '2979562', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B3-01A', '', '3', '1', 'In-frame', 'Inter-chr', '17q24.2', '7p22.2', '', '', '', '', '', '', ''), ('42103', 'PRADA', 'HSF1_ADAMTS12', 'HSF1', 'chr8', '145515556', '+', 'ADAMTS12', 'chr5', '33596165', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B3-01A', '', '27', '1', 'Out-of-frame', 'Inter-chr', '8q24.3', '5p13.3', '', '', '', '', '', '', ''), ('42104', 'PRADA', 'G6PD_F8', 'G6PD', 'chrX', '153774251', '-', 'F8', 'chrX', '154091502', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B5-01A', '', '13', '1', 'In-frame', 'Intra-chr', 'Xq28', 'Xq28', '', '', '', '', '', '', ''), ('42105', 'PRADA', 'PTK2_PPP2R5E', 'PTK2', 'chr8', '141900642', '-', 'PPP2R5E', 'chr14', '63920603', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B6-01A', '', '14', '2', 'Out-of-frame', 'Inter-chr', '8q24.3', '14q23.2', '', '', '', '', '', '', ''), ('42106', 'PRADA', 'ANKS1B_NDUFA12', 'ANKS1B', 'chr12', '100048845', '-', 'NDUFA12', 'chr12', '95365396', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B6-01A', '', '8', '1', 'Out-of-frame', 'Intra-chr', '12q23.1', '12q22', '', '', '', '', '', '', ''), ('42107', 'PRADA', 'SCYL1_FRMD8', 'SCYL1', 'chr11', '65294588', '+', 'FRMD8', 'chr11', '65172335', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B7-01A', '', '19', '1', 'In-frame', 'Intra-chr', '11q13.1', '11q13.1', '', '', '', '', '', '', ''), ('42108', 'PRADA', 'MTSS1_ST3GAL1', 'MTSS1', 'chr8', '125740125', '-', 'ST3GAL1', 'chr8', '134478333', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B7-01A', '', '50', '1', 'In-frame', 'Intra-chr', '8q24.13', '8q24.22', '', '', '', '', '', '', ''), ('42109', 'PRADA', 'ANKLE2_NHP2L1', 'ANKLE2', 'chr12', '133324418', '-', 'NHP2L1', 'chr22', '42076368', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B7-01A', '', '58', '1', 'In-frame', 'Inter-chr', '12q24.33', '22q13.2', '', '', '', '', '', '', ''), ('42110', 'PRADA', 'TMEM132E_GPATCH8', 'TMEM132E', 'chr17', '32908162', '+', 'GPATCH8', 'chr17', '42501860', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B7-01A', '', '9', '1', 'Out-of-frame', 'Intra-chr', '17q12', '17q21.31', '', '', '', '', '', '', ''), ('42111', 'PRADA', 'RPL19_CCL11', 'RPL19', 'chr17', '37356602', '+', 'CCL11', 'chr17', '32614115', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B7-01A', '', '11', '1', 'Out-of-frame', 'Intra-chr', '17q12', '17q12', '', '', '', '', '', '', ''), ('42112', 'PRADA', 'EEA1_PAH', 'EEA1', 'chr12', '93258636', '-', 'PAH', 'chr12', '103249110', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B7-01A', '', '10', '1', 'In-frame', 'Intra-chr', '12q22', '12q23.2', '', '', '', '', '', '', ''), ('42113', 'PRADA', 'KIF5B_HPS4', 'KIF5B', 'chr10', '32337392', '-', 'HPS4', 'chr22', '26860792', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B7-01A', '', '76', '1', 'Out-of-frame', 'Inter-chr', '10p11.22', '22q12.1', '', '', '', '', '', '', '');
INSERT INTO `ChimerSeq_dump` VALUES ('42114', 'PRADA', 'MIOS_ADAP1', 'MIOS', 'chr7', '7613827', '+', 'ADAP1', 'chr7', '975141', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B7-01A', '', '3', '2', 'In-frame', 'Intra-chr', '7p21.3', '7p22.3', '', '', '', '', '', '', ''), ('42115', 'PRADA', 'GTF2F2_NBEA', 'GTF2F2', 'chr13', '45781640', '+', 'NBEA', 'chr13', '35923245', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B7-01A', '', '12', '1', 'In-frame', 'Intra-chr', '13q14.12', '13q13.3', '', '', '', '', '', '', ''), ('42116', 'PRADA', 'LRP12_RIMS2', 'LRP12', 'chr8', '105521167', '-', 'RIMS2', 'chr8', '105160835', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B7-01A', '', '4', '1', 'In-frame', 'Intra-chr', '8q22.3', '8q22.3', '', '', '', '', '', '', ''), ('42117', 'PRADA', 'ARHGAP21_ASPHD2', 'ARHGAP21', 'chr10', '24883879', '-', 'ASPHD2', 'chr22', '26838425', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B7-01A', '', '2', '1', 'Out-of-frame', 'Inter-chr', '10p12.1', '22q12.1', '', '', '', '', '', '', ''), ('42118', 'PRADA', 'PIP4K2B_TMEM132E', 'PIP4K2B', 'chr17', '36955519', '-', 'TMEM132E', 'chr17', '32953146', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B7-01A', '', '6', '1', 'Out-of-frame', 'Intra-chr', '17q12', '17q12', '', '', '', '', '', '', ''), ('42119', 'PRADA', 'RFTN1_DAZL', 'RFTN1', 'chr3', '16399439', '-', 'DAZL', 'chr3', '16640105', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B9-01A', '', '16', '1', 'In-frame', 'Intra-chr', '3p25.1', '3p24.3', '', '', '', '', '', '', ''), ('42120', 'PRADA', 'ACTN4_CAPZB', 'ACTN4', 'chr19', '39207956', '+', 'CAPZB', 'chr1', '19712120', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B9-01A', '', '65', '2', 'In-frame', 'Inter-chr', '19q13.2', '1p36.13', '', '', '', '', '', '', ''), ('42121', 'PRADA', 'RBM38_SPO11', 'RBM38', 'chr20', '55968389', '+', 'SPO11', 'chr20', '55917785', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0B9-01A', '', '9', '1', 'In-frame', 'Intra-chr', '20q13.31', '20q13.31', '', '', '', '', '', '', ''), ('42122', 'PRADA', 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'chr22', '38962595', '-', 'DNAL4', 'chr22', '39177014', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0BC-01A', '', '5', '2', 'In-frame', 'Intra-chr', '22q13.1', '22q13.1', '', '', '', '', '', '', ''), ('42139', 'PRADA', 'KDM6A_PDHX', 'KDM6A', 'chrX', '44950109', '+', 'PDHX', 'chr11', '34952951', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0BF-01A', '', '4', '1', 'Out-of-frame', 'Inter-chr', 'Xp11.3', '11p13', '', '', '', '', '', '', ''), ('42140', 'PRADA', 'PDHX_KDM6A', 'PDHX', 'chr11', '34938362', '+', 'KDM6A', 'chrX', '44966655', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0BF-01A', '', '19', '2', 'Out-of-frame', 'Inter-chr', '11p13', 'Xp11.3', '', '', '', '', '', '', ''), ('42141', 'PRADA', 'FAM36A_SDCCAG8', 'FAM36A', 'chr1', '245005560', '+', 'SDCCAG8', 'chr1', '243504341', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0BF-01A', '', '3', '1', 'Out-of-frame', 'Intra-chr', '1q44', '1q43', '', '', '', '', '', '', ''), ('42142', 'PRADA', 'PHF21A_C18orf34', 'PHF21A', 'chr11', '46098305', '-', 'C18orf34', 'chr18', '30847261', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0BG-01A', '', '49', '3', 'In-frame', 'Inter-chr', '11p11.2', '18q12.1', '', '', '', '', '', '', ''), ('42143', 'PRADA', 'NLE1_BAIAP2', 'NLE1', 'chr17', '33468998', '-', 'BAIAP2', 'chr17', '79027468', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0BJ-01A', '', '2', '1', 'In-frame', 'Intra-chr', '17q12', '17q25.3', '', '', '', '', '', '', ''), ('42144', 'PRADA', 'USP34_CARKD', 'USP34', 'chr2', '61468695', '-', 'CARKD', 'chr13', '111286892', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0BL-01A', '', '2', '1', 'In-frame', 'Inter-chr', '2p15', '13q34', '', '', '', '', '', '', ''), ('42145', 'PRADA', 'RASA2_COBRA1', 'RASA2', 'chr3', '141278837', '+', 'COBRA1', 'chr9', '140157489', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0BL-01A', '', '6', '1', 'Out-of-frame', 'Inter-chr', '3q23', '9q34.3', '', '', '', '', '', '', ''), ('42146', 'PRADA', 'IGF2R_ACVR2A', 'IGF2R', 'chr6', '160390427', '+', 'ACVR2A', 'chr2', '148672760', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0BL-01A', '', '3', '2', 'Out-of-frame', 'Inter-chr', '6q25.3', '2q22.3', 'Kinase', '', '', '', '', '', ''), ('42147', 'PRADA', 'PPP2R5D_ASCC3', 'PPP2R5D', 'chr6', '42957426', '+', 'ASCC3', 'chr6', '101215221', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0BO-01A', '', '5', '1', 'In-frame', 'Intra-chr', '6p21.1', '6q16.3', '', '', '', '', '', '', ''), ('42148', 'PRADA', 'STRN_HEATR5B', 'STRN', 'chr2', '37121041', '-', 'HEATR5B', 'chr2', '37293053', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0BP-01A', '', '4', '1', 'In-frame', 'Intra-chr', '2p22.2', '2p22.2', '', '', '', '', '', '', ''), ('42149', 'PRADA', 'PNPO_NPEPPS', 'PNPO', 'chr17', '46020796', '+', 'NPEPPS', 'chr17', '45669322', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0BP-01A', '', '2', '1', 'Out-of-frame', 'Intra-chr', '17q21.32', '17q21.32', '', '', '', '', '', '', ''), ('42150', 'PRADA', 'BTBD1_MESP1', 'BTBD1', 'chr15', '83710480', '-', 'MESP1', 'chr15', '90293458', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0BP-01A', '', '39', '1', 'Out-of-frame', 'Intra-chr', '15q25.2', '15q26.1', '', '', '', '', '', '', ''), ('42151', 'PRADA', 'TYK2_SHC2', 'TYK2', 'chr19', '10468440', '-', 'SHC2', 'chr19', '430747', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0BP-01A', '', '8', '1', 'In-frame', 'Intra-chr', '19p13.2', '19p13.3', '', '', '', '', '', '', ''), ('42152', 'PRADA', 'ALCAM_YIF1B', 'ALCAM', 'chr3', '105086325', '+', 'YIF1B', 'chr19', '38800283', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0BP-01A', '', '22', '1', 'In-frame', 'Inter-chr', '3q13.11', '19q13.2', '', '', '', '', '', '', ''), ('42153', 'PRADA', 'ADAMTS17_PCDHA8', 'ADAMTS17', 'chr15', '100871094', '-', 'PCDHA8', 'chr5', '140358534', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0BP-01A', '', '3', '1', 'Out-of-frame', 'Inter-chr', '15q26.3', '5q31.3', '', '', '', '', '', '', ''), ('42154', 'PRADA', 'ZBTB45_ZFR2', 'ZBTB45', 'chr19', '59027762', '-', 'ZFR2', 'chr19', '3823401', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0BP-01A', '', '7', '2', 'In-frame', 'Intra-chr', '19q13.43', '19p13.3', '', '', '', '', '', '', ''), ('42155', 'PRADA', 'AP1M1_ZNF93', 'AP1M1', 'chr19', '16319988', '+', 'ZNF93', 'chr19', '20043991', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0BR-01A', '', '26', '2', 'Out-of-frame', 'Intra-chr', '19p13.11', '19p12', '', '', '', '', '', '', ''), ('42156', 'PRADA', 'TBC1D9_CORO1C', 'TBC1D9', 'chr4', '141591874', '-', 'CORO1C', 'chr12', '109072170', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0BR-01A', '', '24', '2', 'In-frame', 'Inter-chr', '4q31.21', '12q24.11', '', '', '', '', '', '', ''), ('42157', 'PRADA', 'NDUFA7_SH2D3A', 'NDUFA7', 'chr19', '8381380', '-', 'SH2D3A', 'chr19', '6755326', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0BR-01A', '', '8', '1', 'Out-of-frame', 'Intra-chr', '19p13.2', '19p13.3', '', '', '', '', '', '', ''), ('42158', 'PRADA', 'TBC1D9_SMARCA5', 'TBC1D9', 'chr4', '141560240', '-', 'SMARCA5', 'chr4', '144438508', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0BR-01A', '', '6', '1', 'In-frame', 'Intra-chr', '4q31.21', '4q31.21', '', '', '', '', '', '', ''), ('42159', 'PRADA', 'TET3_DGUOK', 'TET3', 'chr2', '74317174', '+', 'DGUOK', 'chr2', '74184252', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0BZ-01A', '', '40', '2', 'In-frame', 'Intra-chr', '2p13.1', '2p13.1', 'Kinase', '', '', '', '', '', ''), ('42160', 'PRADA', 'RFTN1_DAZL', 'RFTN1', 'chr3', '16450882', '-', 'DAZL', 'chr3', '16636090', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0BZ-01A', '', '3', '1', 'In-frame', 'Intra-chr', '3p24.3', '3p24.3', '', '', '', '', '', '', ''), ('42161', 'PRADA', 'SYNRG_CCR7', 'SYNRG', 'chr17', '35921297', '-', 'CCR7', 'chr17', '38715194', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0BZ-01A', '', '9', '1', 'In-frame', 'Intra-chr', '17q12', '17q21.2', '', '', '', '', '', '', ''), ('42162', 'PRADA', 'MRPS23_VEZF1', 'MRPS23', 'chr17', '55926601', '-', 'VEZF1', 'chr17', '56052261', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0BZ-01A', '', '36', '1', 'Out-of-frame', 'Intra-chr', '17q22', '17q22', '', '', '', '', '', '', ''), ('42163', 'PRADA', 'MCM5_RALGAPB', 'MCM5', 'chr22', '35799535', '+', 'RALGAPB', 'chr20', '37182510', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0C0-01A', '', '8', '1', 'In-frame', 'Inter-chr', '22q12.3', '20q11.23', '', '', '', '', '', '', ''), ('42164', 'PRADA', 'AGPAT2_CDC42SE1', 'AGPAT2', 'chr9', '139571413', '-', 'CDC42SE1', 'chr1', '151027602', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0C0-01A', '', '30', '1', 'In-frame', 'Inter-chr', '9q34.3', '1q21.3', '', '', '', '', '', '', ''), ('42165', 'PRADA', 'HEATR7A_ARMC2', 'HEATR7A', 'chr8', '145278133', '+', 'ARMC2', 'chr6', '109190027', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0C0-01A', '', '5', '1', 'In-frame', 'Inter-chr', '8q24.3', '6q21', '', '', '', '', '', '', ''), ('42166', 'PRADA', 'IQGAP1_MESP2', 'IQGAP1', 'chr15', '90972898', '+', 'MESP2', 'chr15', '90321296', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0C0-01A', '', '8', '1', 'In-frame', 'Intra-chr', '15q26.1', '15q26.1', '', '', '', '', '', '', ''), ('42167', 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'4', '1', 'In-frame', 'Intra-chr', '11q14.1', '11q14.1', '', '', '', '', '', '', ''), ('42196', 'PRADA', 'DOPEY2_TRPM2', 'DOPEY2', 'chr21', '37537169', '+', 'TRPM2', 'chr21', '45825025', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0EE-01A', '', '18', '1', 'In-frame', 'Intra-chr', '21q22.12', '21q22.3', '', '', '', '', '', '', ''), ('42197', 'PRADA', 'DGCR2_PPPDE2', 'DGCR2', 'chr22', '19028571', '-', 'PPPDE2', 'chr22', '42003865', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0EE-01A', '', '29', '2', 'In-frame', 'Intra-chr', '22q11.21', '22q13.2', '', '', '', '', '', '', ''), ('42198', 'PRADA', 'SETDB2_ERH', 'SETDB2', 'chr13', '50042096', '+', 'ERH', 'chr14', '69847357', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0EE-01A', '', '286', '3', 'In-frame', 'Inter-chr', '13q14.2', '14q24.1', '', '', '', '', '', '', ''), ('42199', 'PRADA', 'GCFC1_ADAMTS1', 'GCFC1', 'chr21', '34142125', '-', 'ADAMTS1', 'chr21', '28215004', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0EE-01A', '', '2', '1', 'In-frame', 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'Intra-chr', '8p11.23', '8p11.22', '', '', '', '', '', '', ''), ('42204', 'PRADA', 'LRP3_THAP8', 'LRP3', 'chr19', '33693892', '+', 'THAP8', 'chr19', '36531038', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0GY-01A', '', '15', '2', 'In-frame', 'Intra-chr', '19q13.11', '19q13.12', '', '', '', '', '', '', ''), ('42205', 'PRADA', 'IGSF3_MAN1A2', 'IGSF3', 'chr1', '117208906', '-', 'MAN1A2', 'chr1', '117944808', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0GY-01A', '', '10', '1', 'Out-of-frame', 'Intra-chr', '1p13.1', '1p12', '', '', '', '', '', '', ''), ('42206', 'PRADA', 'PTGFRN_AGBL4', 'PTGFRN', 'chr1', '117492194', '+', 'AGBL4', 'chr1', '50163109', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0GY-01A', '', '13', '1', 'In-frame', 'Intra-chr', '1p13.1', '1p33', '', '', '', '', '', '', ''), ('42207', 'PRADA', 'ARFGEF2_CNIH2', 'ARFGEF2', 'chr20', '47558524', '+', 'CNIH2', 'chr11', '66049730', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0H6-01A', '', '34', '2', 'In-frame', 'Inter-chr', '20q13.13', '11q13.2', '', '', '', '', '', '', ''), ('42208', 'PRADA', 'AC011997.1_LRRC69', 'AC011997.1', 'chr2', '198557940', '+', 'LRRC69', 'chr8', '92212841', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0H7-01A', '', '3', '1', 'Out-of-frame', 'Inter-chr', '2q33.1', '8q21.3', '', '', '', '', '', '', ''), ('42209', 'PRADA', 'FNIP2_LRBA', 'FNIP2', 'chr4', '159690471', '+', 'LRBA', 'chr4', '151242520', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0H7-01A', '', '6', '1', 'Out-of-frame', 'Intra-chr', '4q32.1', '4q31.3', '', '', '', '', '', '', ''), ('42210', 'PRADA', 'ZMYND8_MN1', 'ZMYND8', 'chr20', '45976600', '-', 'MN1', 'chr22', '28147084', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0H7-01A', '', '9', '1', 'In-frame', 'Inter-chr', '20q13.12', '22q12.1', '', '', '', '', '', '', ''), ('42211', 'PRADA', 'ATXN10_APPL1', 'ATXN10', 'chr22', '46136418', '+', 'APPL1', 'chr3', '57280104', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0H7-01A', '', '49', '1', 'In-frame', 'Inter-chr', '22q13.31', '3p14.3', '', '', '', '', '', '', ''), ('42212', 'PRADA', 'LAMA3_PSMA8', 'LAMA3', 'chr18', '21294036', '+', 'PSMA8', 'chr18', '23759032', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0H7-01A', '', '3', '1', 'In-frame', 'Intra-chr', '18q11.2', '18q11.2', '', '', '', '', '', '', ''), ('42213', 'PRADA', 'MTBP_UBXN2A', 'MTBP', 'chr8', '121502810', '+', 'UBXN2A', 'chr2', '24222542', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0H7-01A', '', '2', '1', 'Out-of-frame', 'Inter-chr', '8q24.12', '2p23.3', '', '', '', '', '', '', ''), ('42214', 'PRADA', 'RBFOX2_NTSR1', 'RBFOX2', 'chr22', '36424288', '-', 'NTSR1', 'chr20', '61386037', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0H7-01A', '', '9', '1', 'In-frame', 'Inter-chr', '22q12.3', '20q13.33', '', '', '', 'Receptor', 'Transcription_Factor', '', ''), ('42215', 'PRADA', 'FAM83D_SPECC1L', 'FAM83D', 'chr20', '37555568', '+', 'SPECC1L', 'chr22', '24709281', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0H7-01A', '', '3', '1', 'In-frame', 'Inter-chr', '20q11.23', '22q11.23', '', '', '', '', '', '', ''), ('42216', 'PRADA', 'KDM4B_UHRF1', 'KDM4B', 'chr19', '5144913', '+', 'UHRF1', 'chr19', '4929234', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0H7-01A', '', '14', '1', 'In-frame', 'Intra-chr', '19p13.3', '19p13.3', '', '', '', '', '', '', ''), ('42217', 'PRADA', 'SLC9A8_CCDC64B', 'SLC9A8', 'chr20', '48431726', '+', 'CCDC64B', 'chr16', '3081151', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0H9-01A', '', '12', '1', 'Out-of-frame', 'Inter-chr', '20q13.13', '16p13.3', '', '', '', '', '', '', ''), ('42218', 'PRADA', 'UBR5_AC010859.1', 'UBR5', 'chr8', '103269860', '-', 'AC010859.1', 'chr8', '97847201', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0H9-01A', '', '2', '1', 'Out-of-frame', 'Intra-chr', '8q22.3', '8q22.1', '', '', '', '', '', '', ''), ('42219', 'PRADA', 'UQCC_SAMHD1', 'UQCC', 'chr20', '33981895', '-', 'SAMHD1', 'chr20', '35575207', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0H9-01A', '', '5', '1', 'Out-of-frame', 'Intra-chr', '20q11.22', '20q11.23', '', '', '', '', '', '', ''), ('42220', 'PRADA', 'NRG2_C5orf32', 'NRG2', 'chr5', '139421955', '-', 'C5orf32', 'chr5', '139622890', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0H9-01A', '', '16', '1', 'In-frame', 'Intra-chr', '5q31.2', '5q31.3', '', '', '', '', '', '', ''), ('42221', 'PRADA', 'SIL1_NRG2', 'SIL1', 'chr5', '138456724', '-', 'NRG2', 'chr5', '139267096', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0H9-01A', '', '54', '1', 'In-frame', 'Intra-chr', '5q31.2', '5q31.2', '', '', '', '', '', '', ''), ('42222', 'PRADA', 'CCDC165_DLGAP1', 'CCDC165', 'chr18', '8720494', '+', 'DLGAP1', 'chr18', '3742512', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0H9-01A', '', '3', '1', 'Out-of-frame', 'Intra-chr', '18p11.22', '18p11.31', '', '', '', '', '', '', ''), ('42223', 'PRADA', 'TRIM37_TUBD1', 'TRIM37', 'chr17', '57181654', '-', 'TUBD1', 'chr17', '57937785', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0HB-01A', '', '9', '1', 'Out-of-frame', 'Intra-chr', '17q22', '17q23.1', '', '', '', '', '', '', ''), ('42224', 'PRADA', 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'DPP6', 'chr7', '154519477', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0W7-01A', '', '15', '1', 'In-frame', 'Intra-chr', '7q22.3', '7q36.2', '', '', '', '', '', '', ''), ('42241', 'PRADA', 'AL109749.1_AIFM1', 'AL109749.1', 'chrX', '131157687', '+', 'AIFM1', 'chrX', '129290577', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0WA-01A', '', '2', '1', 'Out-of-frame', 'Intra-chr', 'Xq26.2', 'Xq26.1', '', '', '', '', '', '', ''), ('42242', 'PRADA', 'UBA3_FRMD4B', 'UBA3', 'chr3', '69120686', '-', 'FRMD4B', 'chr3', '69225807', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0WA-01A', '', '8', '3', 'Out-of-frame', 'Intra-chr', '3p14.1', '3p14.1', '', '', '', '', '', '', ''), ('42243', 'PRADA', 'KLF3_SCFD2', 'KLF3', 'chr4', '38691500', '+', 'SCFD2', 'chr4', '54011749', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A0WA-01A', '', '3', '1', 'Out-of-frame', 'Intra-chr', '4p14', '4q12', '', '', '', '', '', '', ''), ('42244', 'PRADA', 'TAOK1_PIPOX', 'TAOK1', 'chr17', '27794234', '+', 'PIPOX', 'chr17', '27371877', '+', 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INSERT INTO `ChimerSeq_dump` VALUES ('42383', 'PRADA', 'IL1R1_IL1R2', 'IL1R1', 'chr2', '102782741', '+', 'IL1R2', 'chr2', '102626024', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A203-01A', '', '5', '4', 'In-frame', 'Intra-chr', '2q12.1', '2q11.2', '', '', '', '', '', '', ''), ('42384', 'PRADA', 'TIMM17A_RASSF5', 'TIMM17A', 'chr1', '201926702', '+', 'RASSF5', 'chr1', '206711501', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A203-01A', '', '21', '1', 'In-frame', 'Intra-chr', '1q32.1', '1q32.1', '', '', '', '', '', '', ''), ('42385', 'PRADA', 'ARID4B_B3GALNT2', 'ARID4B', 'chr1', '235357328', '-', 'B3GALNT2', 'chr1', '235613655', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A203-01A', '', '34', '1', 'Out-of-frame', 'Intra-chr', '1q42.3', '1q42.3', '', '', '', '', '', '', ''), ('42386', 'PRADA', 'HDAC2_TRDN', 'HDAC2', 'chr6', '114292021', '-', 'TRDN', 'chr6', '123545276', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-BH-A203-01A', '', '19', '2', 'In-frame', 'Intra-chr', '6q21', '6q22.31', '', '', '', '', '', '', 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'12q24.23', '', '', '', '', '', '', ''), ('42432', 'PRADA', 'CDK12_AKAP1', 'CDK12', 'chr17', '37628016', '+', 'AKAP1', 'chr17', '55187386', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12M-01A', '', '10', '1', 'Out-of-frame', 'Intra-chr', '17q12', '17q22', '', '', '', '', '', '', ''), ('42433', 'PRADA', 'PPM1E_VMP1', 'PPM1E', 'chr17', '56833822', '+', 'VMP1', 'chr17', '57886157', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12M-01A', '', '6', '1', 'Out-of-frame', 'Intra-chr', '17q22', '17q23.1', '', '', '', '', '', '', ''), ('42434', 'PRADA', 'CACNG4_VMP1', 'CACNG4', 'chr17', '64961247', '+', 'VMP1', 'chr17', '57812699', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12M-01A', '', '9', '1', 'In-frame', 'Intra-chr', '17q24.2', '17q23.1', '', '', '', '', '', '', ''), ('42435', 'PRADA', 'CORO1C_C12orf42', 'CORO1C', 'chr12', '109072048', '-', 'C12orf42', 'chr12', '103696337', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12M-01A', '', '32', '3', 'Out-of-frame', 'Intra-chr', '12q24.11', '12q23.2', '', '', '', 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'Transcription_Factor', '', ''), ('42440', 'PRADA', 'ERC1_TOMM34', 'ERC1', 'chr12', '1517413', '+', 'TOMM34', 'chr20', '43572220', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12P-01A', '', '59', '2', 'Out-of-frame', 'Inter-chr', '12p13.33', '20q13.12', '', '', '', '', '', '', ''), ('42441', 'PRADA', 'NR2F2_MSI2', 'NR2F2', 'chr15', '96869581', '+', 'MSI2', 'chr17', '55607037', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12P-01A', '', '47', '1', 'Out-of-frame', 'Inter-chr', '15q26.2', '17q22', '', '', '', '', '', '', ''), ('42442', 'PRADA', 'DHX57_SOS1', 'DHX57', 'chr2', '39033701', '-', 'SOS1', 'chr2', '39251278', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12P-01A', '', '2', '1', 'In-frame', 'Intra-chr', '2p22.1', '2p22.1', '', '', '', '', '', '', ''), ('42443', 'PRADA', 'BCAS3_BRIP1', 'BCAS3', 'chr17', '59024713', '+', 'BRIP1', 'chr17', '59878835', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12P-01A', '', '3', '1', 'In-frame', 'Intra-chr', '17q23.2', '17q23.2', '', '', '', '', 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'2q37.1', '', '', '', '', '', '', ''), ('42448', 'PRADA', 'ZNF717_C10orf57', 'ZNF717', 'chr3', '75832457', '-', 'C10orf57', 'chr10', '81841597', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12Q-01A', '', '35', '1', 'In-frame', 'Inter-chr', '3p12.3', '10q22.3', '', '', '', '', '', '', ''), ('42449', 'PRADA', 'GFM1_MLF1', 'GFM1', 'chr3', '158384175', '+', 'MLF1', 'chr3', '158310223', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12Q-01A', '', '109', '1', 'In-frame', 'Intra-chr', '3q25.32', '3q25.32', '', '', '', '', '', '', ''), ('42450', 'PRADA', 'PUM1_NKAIN1', 'PUM1', 'chr1', '31422980', '-', 'NKAIN1', 'chr1', '31661034', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12Q-01A', '', '3', '1', 'In-frame', 'Intra-chr', '1p35.2', '1p35.2', '', '', '', '', '', '', ''), ('42451', 'PRADA', 'CNNM2_NOTCH4', 'CNNM2', 'chr10', '104679858', '+', 'NOTCH4', 'chr6', '32172166', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12Q-01A', '', '2', '1', 'Out-of-frame', 'Inter-chr', '10q24.32', '6p21.32', '', '', '', '', '', '', ''), ('42452', 'PRADA', 'PFKFB3_C10orf18', 'PFKFB3', 'chr10', '6186976', '+', 'C10orf18', 'chr10', '5788142', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12Q-01A', '', '3', '1', 'Out-of-frame', 'Intra-chr', '10p15.1', '10p15.1', '', '', '', '', '', '', ''), ('42453', 'PRADA', 'USP39_DNAH6', 'USP39', 'chr2', '85858069', '+', 'DNAH6', 'chr2', '84945328', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12Q-01A', '', '3', '1', 'Out-of-frame', 'Intra-chr', '2p11.2', '2p11.2', '', '', '', '', '', '', ''), ('42454', 'PRADA', 'RPRD2_SHC1', 'RPRD2', 'chr1', '150337395', '+', 'SHC1', 'chr1', '154938993', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12Q-01A', '', '30', '2', 'Out-of-frame', 'Intra-chr', '1q21.3', '1q21.3', '', '', '', '', '', '', ''), ('42455', 'PRADA', 'TERF2_COG4', 'TERF2', 'chr16', '69418483', '-', 'COG4', 'chr16', '70524295', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12Q-01A', '', '3', '1', 'In-frame', 'Intra-chr', '16q22.1', '16q22.1', '', '', '', '', '', '', ''), ('42456', 'PRADA', 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'BMP5', 'chr6', '55659225', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12U-01A', '', '7', '1', 'Out-of-frame', 'Inter-chr', '2q12.3', '6p12.1', '', '', '', '', '', '', ''), ('42465', 'PRADA', 'GRHL2_TRAPPC9', 'GRHL2', 'chr8', '102611379', '+', 'TRAPPC9', 'chr8', '140922544', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12U-01A', '', '9', '1', 'Out-of-frame', 'Intra-chr', '8q22.3', '8q24.3', '', '', '', '', '', '', ''), ('42466', 'PRADA', 'GBA2_ATP6V1C1', 'GBA2', 'chr9', '35748343', '-', 'ATP6V1C1', 'chr8', '104061098', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12U-01A', '', '5', '2', 'In-frame', 'Inter-chr', '9p13.3', '8q22.3', '', '', '', '', '', '', ''), ('42467', 'PRADA', 'CCDC138_GFRAL', 'CCDC138', 'chr2', '109432561', '+', 'GFRAL', 'chr6', '55263978', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A12U-01A', '', '2', '1', 'Out-of-frame', 'Inter-chr', '2q12.3', '6p12.1', '', '', '', '', '', '', ''), ('42468', 'PRADA', 'ARID1A_THBS3', 'ARID1A', 'chr1', '27059283', '+', 'THBS3', 'chr1', 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'2p21', 'Kinase', '', '', '', '', '', ''), ('42489', 'PRADA', 'RBL1_CPNE1', 'RBL1', 'chr20', '35724176', '-', 'CPNE1', 'chr20', '34220845', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A134-01A', '', '43', '1', 'In-frame', 'Intra-chr', '20q11.23', '20q11.22', '', '', '', '', 'Transcription_Factor', '', ''), ('42490', 'PRADA', 'FXR1_RIMS2', 'FXR1', 'chr3', '180651174', '+', 'RIMS2', 'chr8', '105080740', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A135-01A', '', '2', '3', 'Out-of-frame', 'Inter-chr', '3q26.33', '8q22.3', '', '', '', '', '', '', ''), ('42491', 'PRADA', 'ENDOV_SLC26A11', 'ENDOV', 'chr17', '78389621', '+', 'SLC26A11', 'chr17', '78210727', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A135-01A', '', '11', '2', 'Out-of-frame', 'Intra-chr', '17q25.3', '17q25.3', '', '', '', '', '', '', ''), ('42492', 'PRADA', 'CNKSR1_MAN1C1', 'CNKSR1', 'chr1', '26511103', '+', 'MAN1C1', 'chr1', '26098148', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A135-01A', '', '13', '1', 'In-frame', 'Intra-chr', '1p36.11', '1p36.11', '', '', '', '', '', '', ''), ('42493', 'PRADA', 'TET3_C2orf78', 'TET3', 'chr2', '74275538', '+', 'C2orf78', 'chr2', '74040604', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A135-01A', '', '8', '1', 'In-frame', 'Intra-chr', '2p13.1', '2p13.1', '', '', '', '', '', '', ''), ('42494', 'PRADA', 'KCNMA1_DLG5', 'KCNMA1', 'chr10', '79163620', '-', 'DLG5', 'chr10', '79552301', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A135-01A', '', '2', '1', 'Out-of-frame', 'Intra-chr', '10q22.3', '10q22.3', '', '', '', '', '', '', ''), ('42495', 'PRADA', 'PACS1_ZDHHC24', 'PACS1', 'chr11', '65838313', '+', 'ZDHHC24', 'chr11', '66311452', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A135-01A', '', '22', '3', 'In-frame', 'Intra-chr', '11q13.1', '11q13.2', '', '', '', '', '', '', ''), ('42496', 'PRADA', 'TMX2_C11orf80', 'TMX2', 'chr11', '57480279', '+', 'C11orf80', 'chr11', '66563752', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A135-01A', '', '25', '3', 'In-frame', 'Intra-chr', '11q12.1', '11q13.2', '', '', '', '', '', '', ''), ('42497', 'PRADA', 'DCAF6_MPZL1', 'DCAF6', 'chr1', '167921099', '+', 'MPZL1', 'chr1', '167734820', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A137-01A', '', '2', '1', 'Out-of-frame', 'Intra-chr', '1q24.2', '1q24.2', '', '', '', '', '', '', ''), ('42498', 'PRADA', 'PREP_AIM1', 'PREP', 'chr6', '105729621', '-', 'AIM1', 'chr6', '107003643', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A137-01A', '', '25', '1', 'In-frame', 'Intra-chr', '6q21', '6q21', '', '', '', '', '', '', ''), ('42499', 'PRADA', 'MTG1_ZNF511', 'MTG1', 'chr10', '135216277', '+', 'ZNF511', 'chr10', '135126292', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A137-01A', '', '50', '1', 'In-frame', 'Intra-chr', '10q26.3', '10q26.3', '', '', '', '', '', '', ''), ('42500', 'PRADA', 'UBTD2_SH3PXD2B', 'UBTD2', 'chr5', '171661126', '-', 'SH3PXD2B', 'chr5', '171809131', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A137-01A', '', '6', '1', 'Out-of-frame', 'Intra-chr', '5q35.1', '5q35.1', '', '', '', '', '', '', ''), ('42501', 'PRADA', 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'12q24.11', '12q24.11', '', '', '', '', '', '', ''), ('42546', 'PRADA', 'RBM28_MLL3', 'RBM28', 'chr7', '127961319', '-', 'MLL3', 'chr7', '151882716', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A26X-01A', '', '47', '1', 'Out-of-frame', 'Intra-chr', '7q32.1', '7q36.1', '', '', '', '', '', '', ''), ('42547', 'PRADA', 'ITGB4_SLC16A5', 'ITGB4', 'chr17', '73747192', '+', 'SLC16A5', 'chr17', '73094133', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A26X-01A', '', '9', '1', 'In-frame', 'Intra-chr', '17q25.1', '17q25.1', '', '', '', '', '', '', ''), ('42548', 'PRADA', 'NLK_BCAS3', 'NLK', 'chr17', '26495683', '+', 'BCAS3', 'chr17', '59067332', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A26X-01A', '', '12', '1', 'In-frame', 'Intra-chr', '17q11.2', '17q23.2', 'Kinase', '', '', '', 'Transcription_Factor', '', ''), ('42549', 'PRADA', 'MLLT6_ACE', 'MLLT6', 'chr17', '36868267', '+', 'ACE', 'chr17', '61573755', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A26X-01A', '', '26', '1', 'Out-of-frame', 'Intra-chr', '17q12', '17q23.3', '', '', '', '', '', '', ''), ('42550', 'PRADA', 'EXOC6B_SFXN5', 'EXOC6B', 'chr2', '73052927', '-', 'SFXN5', 'chr2', '73198814', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A26Y-01A', '', '5', '1', 'Out-of-frame', 'Intra-chr', '2p13.2', '2p13.2', '', '', '', '', '', '', ''), ('42551', 'PRADA', 'CTNNA3_C14orf166B', 'CTNNA3', 'chr10', '69281600', '-', 'C14orf166B', 'chr14', '77302550', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A26Y-01A', '', '2', '1', 'In-frame', 'Inter-chr', '10q21.3', '14q24.3', '', '', '', '', '', '', ''), ('42552', 'PRADA', 'EIF2C2_PTK2', 'EIF2C2', 'chr8', '141645584', '-', 'PTK2', 'chr8', '141678523', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A26Y-01A', '', '7', '1', 'Out-of-frame', 'Intra-chr', '8q24.3', '8q24.3', '', '', '', '', '', '', ''), ('42553', 'PRADA', 'SREBF2_FMNL2', 'SREBF2', 'chr22', '42290941', '+', 'FMNL2', 'chr2', '153463853', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-C8-A26Y-01A', '', '26', '2', 'Out-of-frame', 'Inter-chr', '22q13.2', '2q23.3', '', '', 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INSERT INTO `ChimerSeq_dump` VALUES ('42652', 'PRADA', 'NKRF_UBE2A', 'NKRF', 'chrX', '118726346', '-', 'UBE2A', 'chrX', '118715470', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1JK-01A', '', '11', '1', 'In-frame', 'Intra-chr', 'Xq24', 'Xq24', '', '', '', '', '', '', ''), ('42653', 'PRADA', 'UHRF1BP1L_DEPDC4', 'UHRF1BP1L', 'chr12', '100536370', '-', 'DEPDC4', 'chr12', '100650004', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1JK-01A', '', '3', '1', 'Out-of-frame', 'Intra-chr', '12q23.1', '12q23.1', '', '', '', '', '', '', ''), ('42654', 'PRADA', 'ZNF282_CUL1', 'ZNF282', 'chr7', '148910906', '+', 'CUL1', 'chr7', '148463653', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1JK-01A', '', '2', '1', 'Out-of-frame', 'Intra-chr', '7q36.1', '7q36.1', '', '', '', '', '', '', ''), ('42655', 'PRADA', 'DIP2C_YY1', 'DIP2C', 'chr10', '735434', '-', 'YY1', 'chr14', '100728641', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A1JL-01A', '', '6', '1', 'In-frame', 'Inter-chr', '10p15.3', '14q32.2', '', '', '', '', 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'60937456', '-', 'UBN1', 'chr16', '4918834', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A27F-01A', '', '56', '2', 'In-frame', 'Inter-chr', '20q13.33', '16p13.3', '', '', '', '', '', '', ''), ('42726', 'PRADA', 'MSI2_PCTP', 'MSI2', 'chr17', '55339553', '+', 'PCTP', 'chr17', '53844696', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A27F-01A', '', '149', '1', 'In-frame', 'Intra-chr', '17q22', '17q22', '', '', '', '', '', '', ''), ('42727', 'PRADA', 'SKI_KCNT2', 'SKI', 'chr1', '2161174', '+', 'KCNT2', 'chr1', '196461471', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A27F-01A', '', '14', '1', 'Out-of-frame', 'Intra-chr', '1p36.33', '1q31.3', '', '', '', '', 'Transcription_Factor', '', ''), ('42728', 'PRADA', 'UBN1_LAMA5', 'UBN1', 'chr16', '4911103', '+', 'LAMA5', 'chr20', '60937608', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A27F-01A', '', '8', '1', 'In-frame', 'Inter-chr', '16p13.3', '20q13.33', '', '', '', '', '', '', ''), ('42729', 'PRADA', 'TOM1L2_ULK2', 'TOM1L2', 'chr17', '17782941', '-', 'ULK2', 'chr17', '19769141', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A27G-01A', '', '3', '1', 'In-frame', 'Intra-chr', '17p11.2', '17p11.2', 'Kinase', '', '', '', '', '', ''), ('42730', 'PRADA', 'CLNS1A_AQP11', 'CLNS1A', 'chr11', '77336008', '-', 'AQP11', 'chr11', '77314601', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A27G-01A', '', '105', '2', 'In-frame', 'Intra-chr', '11q14.1', '11q14.1', '', '', '', '', '', '', ''), ('42731', 'PRADA', 'KPNB1_SKAP1', 'KPNB1', 'chr17', '45748198', '+', 'SKAP1', 'chr17', '46239931', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A27G-01A', '', '43', '1', 'Out-of-frame', 'Intra-chr', '17q21.32', '17q21.32', '', '', '', '', '', '', ''), ('42732', 'PRADA', 'MAML2_CNTN5', 'MAML2', 'chr11', '95825056', '-', 'CNTN5', 'chr11', '99715584', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A27H-01A', '', '5', '1', 'Out-of-frame', 'Intra-chr', '11q21', '11q22.1', '', '', '', '', '', '', ''), ('42733', 'PRADA', 'KCTD20_JARID2', 'KCTD20', 'chr6', '36438034', '+', 'JARID2', 'chr6', 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'BRCA', 'TCGA-D8-A27H-01A', '', '39', '1', 'Out-of-frame', 'Intra-chr', '9q34.11', '9q34.11', '', '', '', '', '', '', ''), ('42738', 'PRADA', 'ESCO1_ABHD3', 'ESCO1', 'chr18', '19140820', '-', 'ABHD3', 'chr18', '19263926', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A27H-01A', '', '3', '2', 'Out-of-frame', 'Intra-chr', '18q11.2', '18q11.2', '', '', '', '', '', '', ''), ('42739', 'PRADA', 'NFIX_DAND5', 'NFIX', 'chr19', '13136366', '+', 'DAND5', 'chr19', '13084203', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A27H-01A', '', '10', '1', 'Out-of-frame', 'Intra-chr', '19p13.2', '19p13.2', '', '', '', '', '', '', ''), ('42740', 'PRADA', 'TARBP1_RBM34', 'TARBP1', 'chr1', '234582549', '-', 'RBM34', 'chr1', '235295312', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-D8-A27H-01A', '', '60', '2', 'Out-of-frame', 'Intra-chr', '1q42.2', '1q42.3', '', '', '', '', '', '', ''), ('42741', 'PRADA', 'RPS6KB1_VMP1', 'RPS6KB1', 'chr17', '57970686', '+', 'VMP1', 'chr17', '57842332', '+', 'Exonic', 'hg19', 'BRCA', 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'chr20', '6096458', '-', 'FAM18B2', 'chr17', '15341517', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A109-01A', '', '12', '1', 'Out-of-frame', 'Inter-chr', '20p12.3', '17p12', '', '', '', '', '', '', ''), ('42783', 'PRADA', 'ACER3_UVRAG', 'ACER3', 'chr11', '76730820', '+', 'UVRAG', 'chr11', '75826968', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A109-01A', '', '17', '1', 'In-frame', 'Intra-chr', '11q13.5', '11q13.5', '', '', '', '', '', '', ''), ('42784', 'PRADA', 'RANBP10_RRP15', 'RANBP10', 'chr16', '67839331', '-', 'RRP15', 'chr1', '218504290', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A109-01A', '', '185', '2', 'Out-of-frame', 'Inter-chr', '16q22.1', '1q41', '', '', '', '', '', '', ''), ('42785', 'PRADA', 'MACF1_FAF1', 'MACF1', 'chr1', '39893286', '+', 'FAF1', 'chr1', '51061888', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A10A-01A', '', '36', '2', 'In-frame', 'Intra-chr', '1p34.3', '1p32.3', '', '', '', '', 'Transcription_Factor', '', ''), ('42786', 'PRADA', 'GATAD2B_SLC9A11', 'GATAD2B', 'chr1', '153788749', '-', 'SLC9A11', 'chr1', '173478838', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A10A-01A', '', '2', '1', 'Out-of-frame', 'Intra-chr', '1q21.3', '1q25.1', '', '', '', '', '', '', ''), ('42787', 'PRADA', 'RAB3GAP1_MAP4K3', 'RAB3GAP1', 'chr2', '135911446', '+', 'MAP4K3', 'chr2', '39499683', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A10A-01A', '', '7', '1', 'In-frame', 'Intra-chr', '2q21.3', '2p22.1', '', '', '', '', '', '', ''), ('42788', 'PRADA', 'CPM_KCNMA1', 'CPM', 'chr12', '69326458', '-', 'KCNMA1', 'chr10', '78669854', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A10C-01A', '', '7', '1', 'In-frame', 'Inter-chr', '12q15', '10q22.3', '', '', '', '', '', '', ''), ('42789', 'PRADA', 'LPHN3_PPP3CA', 'LPHN3', 'chr4', '62679607', '+', 'PPP3CA', 'chr4', '102030235', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A10F-01A', '', '3', '1', 'In-frame', 'Intra-chr', '4q13.1', '4q24', '', '', '', 'Receptor', '', '', ''), ('42790', 'PRADA', 'PDLIM3_SORBS2', 'PDLIM3', 'chr4', '186456496', '-', 'SORBS2', 'chr4', '186508842', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14N-01A', '', '2', '1', 'Out-of-frame', 'Intra-chr', '4q35.1', '4q35.1', '', '', '', '', '', '', ''), ('42791', 'PRADA', 'ATL2_DHX57', 'ATL2', 'chr2', '38604285', '-', 'DHX57', 'chr2', '39030057', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14N-01A', '', '8', '2', 'Out-of-frame', 'Intra-chr', '2p22.1', '2p22.1', '', '', '', '', '', '', ''), ('42792', 'PRADA', 'SHANK2_OPCML', 'SHANK2', 'chr11', '70505933', '-', 'OPCML', 'chr11', '132399080', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14N-01A', '', '3', '1', 'Out-of-frame', 'Intra-chr', '11q13.4', '11q25', '', '', '', '', '', '', ''), ('42793', 'PRADA', 'CDK5RAP2_ENG', 'CDK5RAP2', 'chr9', '123280705', '-', 'ENG', 'chr9', '130588951', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14N-01A', '', '4', '1', 'In-frame', 'Intra-chr', '9q33.2', '9q34.11', 'Kinase', '', '', '', '', '', ''), ('42794', 'PRADA', 'TBC1D4_COMMD6', 'TBC1D4', 'chr13', '76055406', '-', 'COMMD6', 'chr13', '76111811', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14N-01A', '', '9', '3', 'In-frame', 'Intra-chr', '13q22.2', '13q22.2', '', '', '', '', '', '', ''), ('42795', 'PRADA', 'CAPN6_DCX', 'CAPN6', 'chrX', '110490596', '-', 'DCX', 'chrX', '110544971', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14N-01A', '', '19', '1', 'In-frame', 'Intra-chr', 'Xq23', 'Xq23', 'Kinase', '', '', '', '', '', ''), ('42796', 'PRADA', 'GNAI3_SARS', 'GNAI3', 'chr1', '110091460', '+', 'SARS', 'chr1', '109766600', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14P-01A', '', '198', '1', 'In-frame', 'Intra-chr', '1p13.3', '1p13.3', '', '', '', '', '', '', ''), ('42797', 'PRADA', 'MYCBP2_RNF219', 'MYCBP2', 'chr13', '77807291', '-', 'RNF219', 'chr13', '79219132', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14P-01A', '', '4', '1', 'Out-of-frame', 'Intra-chr', '13q22.3', '13q31.1', '', '', '', '', '', '', ''), ('42798', 'PRADA', 'BCAS3_GH2', 'BCAS3', 'chr17', '59161925', '+', 'GH2', 'chr17', '61958879', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14P-01A', '', '7', '1', 'In-frame', 'Intra-chr', '17q23.2', '17q23.3', '', '', '', '', 'Transcription_Factor', '', ''), ('42799', 'PRADA', 'CELSR1_CERK', 'CELSR1', 'chr22', '46929524', '-', 'CERK', 'chr22', '47083103', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14P-01A', '', '37', '2', 'Out-of-frame', 'Intra-chr', '22q13.31', '22q13.31', 'Kinase', '', '', 'Receptor', '', '', ''), ('42800', 'PRADA', 'GSK3B_FSTL1', 'GSK3B', 'chr3', '119720893', '-', 'FSTL1', 'chr3', '120134874', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14P-01A', '', '27', '2', 'In-frame', 'Intra-chr', '3q13.33', '3q13.33', '', '', '', '', '', '', ''), ('42801', 'PRADA', 'USP13_PIK3CA', 'USP13', 'chr3', '179418917', '+', 'PIK3CA', 'chr3', '178941869', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14P-01A', '', '6', '1', 'In-frame', 'Intra-chr', '3q26.33', '3q26.32', 'Kinase', '', '', '', '', '', ''), ('42802', 'PRADA', 'FRAS1_DCK', 'FRAS1', 'chr4', '79373508', '+', 'DCK', 'chr4', '71888084', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14Q-01A', '', '4', '1', 'Out-of-frame', 'Intra-chr', '4q21.21', '4q13.3', '', '', '', '', '', '', ''), ('42803', 'PRADA', 'SBF2_FEZ1', 'SBF2', 'chr11', '10215449', '-', 'FEZ1', 'chr11', '125333466', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14Q-01A', '', '3', '1', 'In-frame', 'Intra-chr', '11p15.4', '11q24.2', '', '', '', '', '', '', ''), ('42804', 'PRADA', 'TOP1_PZP', 'TOP1', 'chr20', '39690130', '+', 'PZP', 'chr12', '9356547', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14R-01A', '', '14', '1', 'In-frame', 'Inter-chr', '20q12', '12p13.31', '', '', '', '', '', '', ''), ('42805', 'PRADA', 'MBOAT2_ARHGAP25', 'MBOAT2', 'chr2', '9013238', '-', 'ARHGAP25', 'chr2', '69002353', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14R-01A', '', '8', '1', 'In-frame', 'Intra-chr', '2p25.1', '2p13.3', '', '', '', '', '', '', ''), ('42806', 'PRADA', 'PZP_CPNE4', 'PZP', 'chr12', '9333579', '-', 'CPNE4', 'chr3', '131442469', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14R-01A', '', '4', '1', 'In-frame', 'Inter-chr', '12p13.31', '3q22.1', '', '', '', '', '', '', ''), ('42807', 'PRADA', 'MED29_SAMD4B', 'MED29', 'chr19', '39884277', '+', 'SAMD4B', 'chr19', '39873848', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14R-01A', '', '24', '1', 'Out-of-frame', 'Intra-chr', '19q13.2', '19q13.2', '', '', '', '', '', '', ''), ('42808', 'PRADA', 'PLEKHA5_GPC6', 'PLEKHA5', 'chr12', '19285384', '+', 'GPC6', 'chr13', '94938603', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14R-01A', '', '2', '1', 'Out-of-frame', 'Inter-chr', '12p12.3', '13q31.3', '', '', '', '', '', '', ''), ('42809', 'PRADA', 'GTF3C6_LACE1', 'GTF3C6', 'chr6', '111280455', '+', 'LACE1', 'chr6', '108831415', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14S-01A', '', '38', '1', 'In-frame', 'Intra-chr', '6q21', '6q21', '', '', '', '', '', '', ''), ('42810', 'PRADA', 'ERICH1_PCM1', 'ERICH1', 'chr8', '665861', '-', 'PCM1', 'chr8', '17882870', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14T-01A', '', '7', '1', 'Out-of-frame', 'Intra-chr', '8p23.3', '8p22', '', '', '', '', '', '', ''), ('42811', 'PRADA', 'MLF2_PTMS', 'MLF2', 'chr12', '6860807', '-', 'PTMS', 'chr12', '6878769', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14T-01A', '', '52', '1', 'In-frame', 'Intra-chr', '12p13.31', '12p13.31', '', '', '', '', '', '', ''), ('42812', 'PRADA', 'ARID1A_YTHDF2', 'ARID1A', 'chr1', '27059283', '+', 'YTHDF2', 'chr1', '29064170', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14T-01A', '', '105', '5', 'In-frame', 'Intra-chr', '1p36.11', '1p35.3', '', '', '', '', '', '', ''), ('42813', 'PRADA', 'CASK_GLIPR1L1', 'CASK', 'chrX', '41782183', '-', 'GLIPR1L1', 'chr12', '75737473', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14T-01A', '', '12', '1', 'Out-of-frame', 'Inter-chr', 'Xp11.4', '12q21.2', '', '', '', '', '', '', ''), ('42814', 'PRADA', 'PREP_C18orf1', 'PREP', 'chr6', '105845728', '-', 'C18orf1', 'chr18', '13621116', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14V-01A', '', '9', '1', 'Out-of-frame', 'Inter-chr', '6q21', '18p11.21', '', '', '', '', '', '', ''), ('42815', 'PRADA', 'BPTF_FAM117A', 'BPTF', 'chr17', '65962772', '+', 'FAM117A', 'chr17', '47797798', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14V-01A', '', '55', '2', 'Out-of-frame', 'Intra-chr', '17q24.2', '17q21.33', '', '', '', '', '', '', ''), ('42816', 'PRADA', 'SNAPC5_BPIFB4', 'SNAPC5', 'chr15', '66789980', '-', 'BPIFB4', 'chr20', '31692616', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14V-01A', '', '23', '2', 'In-frame', 'Inter-chr', '15q22.31', '20q11.21', '', '', '', '', '', '', ''), ('42817', 'PRADA', 'PPM1D_TRIM37', 'PPM1D', 'chr17', '58711338', '+', 'TRIM37', 'chr17', '57060282', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14V-01A', '', '196', '2', 'Out-of-frame', 'Intra-chr', '17q23.2', '17q22', '', '', '', '', '', '', ''), ('42818', 'PRADA', 'SPOP_TAOK1', 'SPOP', 'chr17', '47679227', '-', 'TAOK1', 'chr17', '27869579', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14V-01A', '', '9', '1', 'Out-of-frame', 'Intra-chr', '17q21.33', '17q11.2', 'Kinase', '', '', '', 'Transcription_Factor', '', ''), ('42819', 'PRADA', 'KSR1_MSI2', 'KSR1', 'chr17', '25783900', '+', 'MSI2', 'chr17', '55478740', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14V-01A', '', '3', '1', 'In-frame', 'Intra-chr', '17q11.1', '17q22', '', '', '', '', '', '', ''), ('42820', 'PRADA', 'RNFT1_PAAF1', 'RNFT1', 'chr17', '58041969', '-', 'PAAF1', 'chr11', '73589824', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14V-01A', '', '44', '2', 'In-frame', 'Inter-chr', '17q23.1', '11q13.4', '', '', '', '', '', '', ''), ('42821', 'PRADA', 'BPIFB1_SNAPC5', 'BPIFB1', 'chr20', '31879794', '+', 'SNAPC5', 'chr15', '66787757', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14V-01A', '', '3', '1', 'In-frame', 'Inter-chr', '20q11.21', '15q22.31', '', '', '', '', '', '', ''), ('42822', 'PRADA', 'MKS1_KSR1', 'MKS1', 'chr17', '56293449', '-', 'KSR1', 'chr17', '25909672', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14V-01A', '', '2', '3', 'Out-of-frame', 'Intra-chr', '17q22', '17q11.2', '', '', '', '', '', '', ''), ('42823', 'PRADA', 'PPM1H_FAM19A2', 'PPM1H', 'chr12', '63328272', '-', 'FAM19A2', 'chr12', '62104198', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14W-01A', '', '14', '1', 'Out-of-frame', 'Intra-chr', '12q14.2', '12q14.1', '', '', '', '', '', '', ''), ('42824', 'PRADA', 'LRP12_TRAPPC9', 'LRP12', 'chr8', '105544135', '-', 'TRAPPC9', 'chr8', '141034176', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14X-01A', '', '60', '2', 'Out-of-frame', 'Intra-chr', '8q22.3', '8q24.3', '', '', '', '', '', '', ''), ('42825', 'PRADA', 'MAP2K3_NKAIN3', 'MAP2K3', 'chr17', '21188281', '+', 'NKAIN3', 'chr8', '63492098', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14Y-01A', '', '13', '1', 'Out-of-frame', 'Inter-chr', '17p11.2', '8q12.3', '', '', '', '', '', '', ''), ('42826', 'PRADA', 'ARFGEF1_CPA6', 'ARFGEF1', 'chr8', '68255399', '-', 'CPA6', 'chr8', '68334926', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14Y-01A', '', '39', '1', 'In-frame', 'Intra-chr', '8q13.2', '8q13.2', '', '', '', '', '', '', ''), ('42827', 'PRADA', 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'RNPC3_KIAA0825', 'RNPC3', 'chr1', '104068884', '+', 'KIAA0825', 'chr5', '93753085', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14Z-01A', '', '3', '1', 'Out-of-frame', 'Inter-chr', '1p21.1', '5q15', '', '', '', '', '', '', ''), ('42832', 'PRADA', 'STK39_ITGB6', 'STK39', 'chr2', '168921829', '-', 'ITGB6', 'chr2', '160994710', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14Z-01A', '', '2', '1', 'In-frame', 'Intra-chr', '2q24.3', '2q24.2', 'Kinase', '', '', '', '', '', ''), ('42833', 'PRADA', 'DPYD_EDIL3', 'DPYD', 'chr1', '97700408', '-', 'EDIL3', 'chr5', '83476339', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A14Z-01A', '', '3', '1', 'Out-of-frame', 'Inter-chr', '1p21.3', '5q14.3', '', '', '', '', '', '', ''), ('42834', 'PRADA', 'MPDZ_C9orf150', 'MPDZ', 'chr9', '13247634', '-', 'C9orf150', 'chr9', '12821385', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A150-01A', '', '43', '1', 'In-frame', 'Intra-chr', '9p23', '9p23', '', '', '', '', '', '', ''), ('42835', 'PRADA', 'CCDC129_DEFB118', 'CCDC129', 'chr7', '31618048', '+', 'DEFB118', 'chr20', '29960660', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A150-01A', '', '3', '1', 'Out-of-frame', 'Inter-chr', '7p14.3', '20q11.21', '', '', '', '', '', '', ''), ('42836', 'PRADA', 'LRP5_ZNF507', 'LRP5', 'chr11', '68197168', '+', 'ZNF507', 'chr19', '32873373', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A150-01A', '', '11', '1', 'Out-of-frame', 'Inter-chr', '11q13.2', '19q13.11', '', '', '', '', '', '', ''), ('42837', 'PRADA', 'ACTN4_FTO', 'ACTN4', 'chr19', '39138547', '+', 'FTO', 'chr16', '53844052', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A150-01A', '', '194', '1', 'In-frame', 'Inter-chr', '19q13.2', '16q12.2', '', '', '', '', 'Transcription_Factor', '', ''), ('42838', 'PRADA', 'ARRB1_ANKFN1', 'ARRB1', 'chr11', '75062632', '-', 'ANKFN1', 'chr17', '54305278', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A155-01A', '', '5', '1', 'Out-of-frame', 'Inter-chr', '11q13.4', '17q22', '', '', '', '', '', '', ''), ('42839', 'PRADA', 'CYFIP1_TUBGCP5', 'CYFIP1', 'chr15', '22926065', '+', 'TUBGCP5', 'chr15', '22861737', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A158-01A', '', '9', '2', 'Out-of-frame', 'Intra-chr', '15q11.2', '15q11.2', '', '', '', '', '', '', ''), ('42840', 'PRADA', 'GNAQ_C9orf64', 'GNAQ', 'chr9', '80409379', '-', 'C9orf64', 'chr9', '86559904', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A159-01A', '', '3', '1', 'In-frame', 'Intra-chr', '9q21.2', '9q21.32', '', '', '', '', '', '', ''), ('42841', 'PRADA', 'KIF1B_MYO5B', 'KIF1B', 'chr1', '10328321', '+', 'MYO5B', 'chr18', '47527781', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A159-01A', '', '6', '1', 'Out-of-frame', 'Inter-chr', '1p36.22', '18q21.1', '', '', '', '', '', '', ''), ('42842', 'PRADA', 'WDR85_PPP2R4', 'WDR85', 'chr9', '140468660', '-', 'PPP2R4', 'chr9', '131885331', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A159-01A', '', '12', '2', 'Out-of-frame', 'Intra-chr', '9q34.3', '9q34.11', '', '', '', '', '', '', ''), ('42843', 'PRADA', 'IKBIP_ANKS1B', 'IKBIP', 'chr12', '99028074', '-', 'ANKS1B', 'chr12', '99175915', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A159-01A', '', '5', '2', 'In-frame', 'Intra-chr', '12q23.1', '12q23.1', '', '', '', '', '', '', ''), ('42844', 'PRADA', 'TXNDC11_ZC3H7A', 'TXNDC11', 'chr16', '11836333', '-', 'ZC3H7A', 'chr16', '11850226', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15A-01A', '', '5', '1', 'Out-of-frame', 'Intra-chr', '16p13.13', '16p13.13', '', '', '', '', '', '', ''), ('42845', 'PRADA', 'DGKH_MED13L', 'DGKH', 'chr13', '42795530', '+', 'MED13L', 'chr12', '116460406', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15A-01A', '', '5', '1', 'Out-of-frame', 'Inter-chr', '13q14.11', '12q24.21', '', '', '', '', '', '', ''), ('42846', 'PRADA', 'ASH2L_C20orf72', 'ASH2L', 'chr8', '37971805', '+', 'C20orf72', 'chr20', '17968809', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15A-01A', '', '25', '4', 'Out-of-frame', 'Inter-chr', '8p11.23', '20p11.23', '', '', '', '', '', '', ''), ('42847', 'PRADA', 'ATP1A1_VANGL1', 'ATP1A1', 'chr1', '116916145', '+', 'VANGL1', 'chr1', '116206282', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15A-01A', '', '10', '2', 'In-frame', 'Intra-chr', '1p13.1', '1p13.1', '', '', '', '', '', '', ''), ('42848', 'PRADA', 'WHSC1L1_ANK1', 'WHSC1L1', 'chr8', '38205015', '-', 'ANK1', 'chr8', '41615655', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15A-01A', '', '157', '3', 'In-frame', 'Intra-chr', '8p11.23', '8p11.21', '', '', '', '', '', '', ''), ('42849', 'PRADA', 'MED13L_DGKH', 'MED13L', 'chr12', '116440808', '-', 'DGKH', 'chr13', '42783095', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15A-01A', '', '7', '1', 'Out-of-frame', 'Inter-chr', '12q24.21', '13q14.11', '', '', '', '', '', '', ''), ('42850', 'PRADA', 'KAT6A_ADAM2', 'KAT6A', 'chr8', '41905896', '-', 'ADAM2', 'chr8', '39627094', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15A-01A', '', '226', '5', 'Out-of-frame', 'Intra-chr', '8p11.21', '8p11.22', '', '', '', '', 'Transcription_Factor', '', ''), ('42851', 'PRADA', 'PRICKLE3_CACNA1F', 'PRICKLE3', 'chrX', '49040187', '-', 'CACNA1F', 'chrX', '49065853', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15A-01A', '', '17', '1', 'In-frame', 'Intra-chr', 'Xp11.23', 'Xp11.23', '', '', '', '', '', '', ''), ('42852', 'PRADA', 'RPS6KA2_PSMG4', 'RPS6KA2', 'chr6', '166872937', '-', 'PSMG4', 'chr6', '3263918', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15D-01A', '', '2', '1', 'Out-of-frame', 'Intra-chr', '6q27', '6p25.2', '', '', '', '', '', '', ''), ('42853', 'PRADA', 'PRR12_PRRG2', 'PRR12', 'chr19', '50124879', '+', 'PRRG2', 'chr19', '50091754', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15E-01A', '', '3', '1', 'Out-of-frame', 'Intra-chr', '19q13.33', '19q13.33', '', '', '', '', '', '', ''), ('42854', 'PRADA', 'KIAA1430_CCDC110', 'KIAA1430', 'chr4', '186096940', '-', 'CCDC110', 'chr4', '186384203', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15E-01A', '', '9', '1', 'Out-of-frame', 'Intra-chr', '4q35.1', '4q35.1', '', '', '', '', '', '', ''), ('42855', 'PRADA', 'SUFU_GBF1', 'SUFU', 'chr10', '104309863', '+', 'GBF1', 'chr10', '104111013', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15E-01A', '', '6', '1', 'In-frame', 'Intra-chr', '10q24.32', '10q24.32', '', '', '', '', 'Transcription_Factor', '', ''), ('42856', 'PRADA', 'HEYL_COL9A2', 'HEYL', 'chr1', '40105218', '-', 'COL9A2', 'chr1', '40777387', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15E-01A', '', '21', '1', 'Out-of-frame', 'Intra-chr', '1p34.2', '1p34.2', '', '', '', '', '', '', ''), ('42857', 'PRADA', 'H2AFY_CNOT6', 'H2AFY', 'chr5', '134688636', '-', 'CNOT6', 'chr5', '179991489', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15E-01A', '', '15', '1', 'In-frame', 'Intra-chr', '5q31.1', '5q35.3', '', '', '', '', '', '', ''), ('42858', 'PRADA', 'CCDC14_ADAM19', 'CCDC14', 'chr3', '123667538', '-', 'ADAM19', 'chr5', '156991451', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15F-01A', '', '3', '1', 'In-frame', 'Inter-chr', '3q21.1', '5q33.3', '', '', '', '', '', '', ''), ('42859', 'PRADA', 'CHMP5_VMP1', 'CHMP5', 'chr9', '33266112', '+', 'VMP1', 'chr17', '57886157', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15H-01A', '', '31', '1', 'In-frame', 'Inter-chr', '9p13.3', '17q23.1', '', '', '', '', '', '', ''), ('42860', 'PRADA', 'BPTF_CCDC40', 'BPTF', 'chr17', '65928135', '+', 'CCDC40', 'chr17', '78021078', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15H-01A', '', '23', '1', 'Out-of-frame', 'Intra-chr', '17q24.2', '17q25.3', '', '', '', '', '', '', ''), ('42861', 'PRADA', 'CDC6_RNFT1', 'CDC6', 'chr17', '38457282', '+', 'RNFT1', 'chr17', '58040645', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15H-01A', '', '9', '2', 'Out-of-frame', 'Intra-chr', '17q21.2', '17q23.1', '', '', '', '', '', '', ''), ('42862', 'PRADA', 'COIL_CDR2L', 'COIL', 'chr17', '55038136', '-', 'CDR2L', 'chr17', '72995599', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15H-01A', '', '49', '1', 'Out-of-frame', 'Intra-chr', '17q22', '17q25.1', '', '', '', '', '', '', ''), ('42863', 'PRADA', 'TRAPPC9_COL22A1', 'TRAPPC9', 'chr8', '141370149', '-', 'COL22A1', 'chr8', '139768072', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15H-01A', '', '28', '1', 'Out-of-frame', 'Intra-chr', '8q24.3', '8q24.23', '', '', '', '', '', '', ''), ('42864', 'PRADA', 'APTX_GNE', 'APTX', 'chr9', '33001565', '-', 'GNE', 'chr9', '36220017', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15H-01A', '', '3', '3', 'Out-of-frame', 'Intra-chr', '9p21.1', '9p13.3', 'Kinase', '', '', '', '', '', ''), ('42865', 'PRADA', 'NUP155_ZFYVE26', 'NUP155', 'chr5', '37370923', '-', 'ZFYVE26', 'chr14', '68244965', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15K-01A', '', '11', '1', 'Out-of-frame', 'Inter-chr', '5p13.2', '14q24.1', '', '', '', '', '', '', ''), ('42866', 'PRADA', 'SPATA5_CENPE', 'SPATA5', 'chr4', '123900541', '+', 'CENPE', 'chr4', '104098203', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15K-01A', '', '2', '1', 'In-frame', 'Intra-chr', '4q28.1', '4q24', '', '', '', '', '', '', ''), ('42867', 'PRADA', 'FDFT1_INTS9', 'FDFT1', 'chr8', '11660440', '+', 'INTS9', 'chr8', '28707790', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15K-01A', '', '11', '1', 'Out-of-frame', 'Intra-chr', '8p23.1', '8p21.1', '', '', '', '', '', '', ''), ('42868', 'PRADA', 'LGALS8_TRIM67', 'LGALS8', 'chr1', '236689415', '+', 'TRIM67', 'chr1', '231333117', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15M-01A', '', '7', '1', 'In-frame', 'Intra-chr', '1q43', '1q42.2', '', '', '', '', '', '', ''), ('42869', 'PRADA', 'SNX30_DENND1A', 'SNX30', 'chr9', '115580095', '+', 'DENND1A', 'chr9', '126220176', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15M-01A', '', '5', '1', 'In-frame', 'Intra-chr', '9q32', '9q33.3', '', '', '', '', '', '', ''), ('42870', 'PRADA', 'HOOK3_PLEKHA2', 'HOOK3', 'chr8', '42798588', '+', 'PLEKHA2', 'chr8', '38826110', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15M-01A', '', '4', '2', 'Out-of-frame', 'Intra-chr', '8p11.21', '8p11.22', '', '', '', '', '', '', ''), ('42871', 'PRADA', 'MRPL21_SSH3', 'MRPL21', 'chr11', '68663983', '-', 'SSH3', 'chr11', '67074309', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15O-01A', '', '92', '1', 'In-frame', 'Intra-chr', '11q13.3', '11q13.2', '', '', '', '', '', '', ''), ('42872', 'PRADA', 'CPT1A_ADAM2', 'CPT1A', 'chr11', '68540733', '-', 'ADAM2', 'chr8', '39607263', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15R-01A', '', '70', '3', 'In-frame', 'Inter-chr', '11q13.3', '8p11.22', '', '', '', '', '', '', ''), ('42873', 'PRADA', 'PAX5_TMEM9B', 'PAX5', 'chr9', '37033983', '-', 'TMEM9B', 'chr11', '8977845', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15S-01A', '', '3', '1', 'Out-of-frame', 'Inter-chr', '9p13.2', '11p15.4', '', '', '', '', '', '', ''), ('42874', 'PRADA', 'TSPAN15_VPS26A', 'TSPAN15', 'chr10', '71211446', '+', 'VPS26A', 'chr10', '70915568', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15S-01A', '', '2', '1', 'In-frame', 'Intra-chr', '10q22.1', '10q22.1', '', '', '', '', '', '', ''), ('42875', 'PRADA', 'LRRC6_EXT1', 'LRRC6', 'chr8', '133687730', '-', 'EXT1', 'chr8', '118849440', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15T-01A', '', '9', '1', 'Out-of-frame', 'Intra-chr', '8q24.22', '8q24.11', '', '', '', '', '', '', ''), ('42876', 'PRADA', 'DUS2L_UNC5C', 'DUS2L', 'chr16', '68072052', '+', 'UNC5C', 'chr4', '96171818', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A15T-01A', '', '10', '1', 'In-frame', 'Inter-chr', '16q22.1', '4q22.3', '', '', '', '', '', '', ''), ('42877', 'PRADA', 'EIF4E2_DIS3L2', 'EIF4E2', 'chr2', '233429061', '+', 'DIS3L2', 'chr2', '233194523', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1AZ-01A', '', '2', '1', 'Out-of-frame', 'Intra-chr', '2q37.1', '2q37.1', '', '', '', '', '', '', ''), ('42878', 'PRADA', 'KRAS_RERGL', 'KRAS', 'chr12', '25398208', '-', 'RERGL', 'chr12', '18241890', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1AZ-01A', '', '7', '1', 'Out-of-frame', 'Intra-chr', '12p12.1', '12p12.3', '', '', '', '', '', '', ''), ('42879', 'PRADA', 'TRPS1_RP11-664D7.4', 'TRPS1', 'chr8', '116599228', '-', 'RP11-664D7.4', 'chr8', '69218833', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1B0-01A', '', '63', '2', 'Out-of-frame', 'Intra-chr', '8q23.3', '8q13.2', '', '', '', '', '', '', ''), ('42880', 'PRADA', 'RNF170_HOOK3', 'RNF170', 'chr8', '42742871', '-', 'HOOK3', 'chr8', '42761316', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1B0-01A', '', '4', '2', 'Out-of-frame', 'Intra-chr', '8p11.21', '8p11.21', '', '', '', '', '', '', ''), ('42881', 'PRADA', 'BRPF3_HLA-DMA', 'BRPF3', 'chr6', '36172591', '+', 'HLA-DMA', 'chr6', '32918580', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1B0-01A', '', '4', '1', 'Out-of-frame', 'Intra-chr', '6p21.31', '6p21.32', '', '', '', '', '', '', ''), ('42882', 'PRADA', 'PIGU_PTPRT', 'PIGU', 'chr20', '33162908', '-', 'PTPRT', 'chr20', '40911165', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1B1-01A', '', '8', '1', 'In-frame', 'Intra-chr', '20q11.22', '20q12', '', '', '', '', '', '', ''), ('42883', 'PRADA', 'HELZ_PITPNC1', 'HELZ', 'chr17', '65103285', '-', 'PITPNC1', 'chr17', '65688688', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1B5-01A', '', '10', '1', 'In-frame', 'Intra-chr', '17q24.2', '17q24.2', '', '', '', '', '', '', ''), ('42884', 'PRADA', 'DOPEY2_SH3BGR', 'DOPEY2', 'chr21', '37612253', '+', 'SH3BGR', 'chr21', '40847061', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1B5-01A', '', '6', '1', 'Out-of-frame', 'Intra-chr', '21q22.12', '21q22.2', '', '', '', '', '', '', ''), ('42885', 'PRADA', 'PCCA_CLYBL', 'PCCA', 'chr13', '100888132', '+', 'CLYBL', 'chr13', '100425078', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1IE-01A', '', '5', '1', 'Out-of-frame', 'Intra-chr', '13q32.3', '13q32.3', '', '', '', '', '', '', ''), ('42886', 'PRADA', 'ANK1_ADAM7', 'ANK1', 'chr8', '41591489', '-', 'ADAM7', 'chr8', '24384268', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1IH-01A', '', '19', '1', 'In-frame', 'Intra-chr', '8p11.21', '8p21.2', '', '', '', '', '', '', ''), ('42887', 'PRADA', 'YME1L1_SLC35D2', 'YME1L1', 'chr10', '27437835', '-', 'SLC35D2', 'chr9', '99122503', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1IH-01A', '', '24', '3', 'In-frame', 'Inter-chr', '10p12.1', '9q22.32', '', '', '', '', '', '', ''), ('42888', 'PRADA', 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INSERT INTO `ChimerSeq_dump` VALUES ('42921', 'PRADA', 'TCF7L1_WIF1', 'TCF7L1', 'chr2', '85361573', '+', 'WIF1', 'chr12', '65471634', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1LI-01A', '', '132', '1', 'In-frame', 'Inter-chr', '2p11.2', '12q14.3', '', '', '', '', '', '', ''), ('42922', 'PRADA', 'MCCC1_MED10', 'MCCC1', 'chr3', '182788787', '-', 'MED10', 'chr5', '6372714', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1LI-01A', '', '32', '1', 'Out-of-frame', 'Inter-chr', '3q27.1', '5p15.31', '', '', '', '', '', '', ''), ('42923', 'PRADA', 'MED10_MCCC1', 'MED10', 'chr5', '6374437', '-', 'MCCC1', 'chr3', '182812393', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1LI-01A', '', '2', '1', 'Out-of-frame', 'Inter-chr', '5p15.31', '3q27.1', '', '', '', '', '', '', ''), ('42924', 'PRADA', 'ATP11B_MED10', 'ATP11B', 'chr3', '182538164', '+', 'MED10', 'chr5', '6372714', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E2-A1LI-01A', '', '13', '1', 'In-frame', 'Inter-chr', '3q26.33', '5p15.31', '', '', '', '', 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'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1N9-01A', '', '29', '4', 'Out-of-frame', 'Inter-chr', '18q21.33', '2p12', '', '', '', '', '', '', ''), ('42954', 'PRADA', 'NUP188_ASTN2', 'NUP188', 'chr9', '131735528', '+', 'ASTN2', 'chr9', '119382722', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1N9-01A', '', '11', '2', 'In-frame', 'Intra-chr', '9q34.11', '9q33.1', '', '', '', '', '', '', ''), ('42955', 'PRADA', 'NEMF_CDKL1', 'NEMF', 'chr14', '50295009', '-', 'CDKL1', 'chr14', '50808940', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1N9-01A', '', '13', '1', 'In-frame', 'Intra-chr', '14q21.3', '14q21.3', '', '', '', '', '', '', ''), ('42956', 'PRADA', 'MORN1_CMPK1', 'MORN1', 'chr1', '2316417', '-', 'CMPK1', 'chr1', '47834141', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1N9-01A', '', '5', '1', 'In-frame', 'Intra-chr', '1p36.32', '1p33', '', '', '', '', '', '', ''), ('42957', 'PRADA', 'GPC4_GPC3', 'GPC4', 'chrX', '132548834', '-', 'GPC3', 'chrX', '132670321', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1NA-01A', 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'17q23.2', '17q23.2', '', '', '', '', '', '', ''), ('42966', 'PRADA', 'FAM172A_KIAA0825', 'FAM172A', 'chr5', '93217176', '-', 'KIAA0825', 'chr5', '93489829', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1NA-01A', '', '2', '1', 'Out-of-frame', 'Intra-chr', '5q15', '5q15', '', '', '', '', '', '', ''), ('42967', 'PRADA', 'SRGAP1_TMEM5', 'SRGAP1', 'chr12', '64238663', '+', 'TMEM5', 'chr12', '64174799', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1NA-01A', '', '3', '1', 'In-frame', 'Intra-chr', '12q14.2', '12q14.2', '', '', '', '', '', '', ''), ('42968', 'PRADA', 'BCAS3_WIPI1', 'BCAS3', 'chr17', '58885437', '+', 'WIPI1', 'chr17', '66432620', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1NA-01A', '', '8', '1', 'Out-of-frame', 'Intra-chr', '17q23.2', '17q24.2', '', '', '', '', '', '', ''), ('42969', 'PRADA', 'SKAP1_BCAS3', 'SKAP1', 'chr17', '46423267', '-', 'BCAS3', 'chr17', '58885365', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1NA-01A', '', '5', '1', 'In-frame', 'Intra-chr', '17q21.32', '17q23.2', '', 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'chr21', '43645781', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1NF-01A', '', '4', '1', 'In-frame', 'Intra-chr', '21q22.2', '21q22.3', '', '', '', '', '', '', ''), ('42987', 'PRADA', 'SASH1_ARID1B', 'SASH1', 'chr6', '148711398', '+', 'ARID1B', 'chr6', '157256600', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1NF-01A', '', '17', '1', 'In-frame', 'Intra-chr', '6q24.3', '6q25.3', '', '', '', '', '', '', ''), ('42988', 'PRADA', 'SPAG17_RABGAP1L', 'SPAG17', 'chr1', '118693166', '-', 'RABGAP1L', 'chr1', '174926594', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1NI-01A', '', '8', '1', 'In-frame', 'Intra-chr', '1p12', '1q25.1', '', '', '', '', '', '', ''), ('42989', 'PRADA', 'DTNA_ZNF521', 'DTNA', 'chr18', '32346005', '+', 'ZNF521', 'chr18', '22902151', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1R6-01A', '', '2', '1', 'In-frame', 'Intra-chr', '18q12.1', '18q11.2', '', '', '', '', '', '', ''), ('42990', 'PRADA', 'EVC_WDR60', 'EVC', 'chr4', '5721100', '+', 'WDR60', 'chr7', '158694430', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1R6-01A', '', '3', '1', 'In-frame', 'Inter-chr', '4p16.2', '7q36.3', '', '', '', '', '', '', ''), ('42991', 'PRADA', 'HTT_ESYT2', 'HTT', 'chr4', '3201666', '+', 'ESYT2', 'chr7', '158566087', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1R6-01A', '', '11', '3', 'Out-of-frame', 'Inter-chr', '4p16.3', '7q36.3', '', '', '', '', '', '', ''), ('42992', 'PRADA', 'FAF1_HCRTR1', 'FAF1', 'chr1', '50956260', '-', 'HCRTR1', 'chr1', '32098037', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1R7-01A', '', '7', '1', 'Out-of-frame', 'Intra-chr', '1p32.3', '1p35.2', '', '', '', 'Receptor', 'Transcription_Factor', '', ''), ('42993', 'PRADA', 'LDLRAD1_FGGY', 'LDLRAD1', 'chr1', '54475955', '-', 'FGGY', 'chr1', '59922633', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1R7-01A', '', '2', '1', 'Out-of-frame', 'Intra-chr', '1p32.3', '1p32.1', '', '', '', '', '', '', ''), ('42994', 'PRADA', 'RMND1_ZDHHC14', 'RMND1', 'chr6', '151738414', '-', 'ZDHHC14', 'chr6', '158093756', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1R7-01A', '', '34', '2', 'In-frame', 'Intra-chr', '6q25.1', '6q25.3', '', '', '', '', '', '', ''), ('42995', 'PRADA', 'FOXJ3_ZNF362', 'FOXJ3', 'chr1', '42730786', '-', 'ZNF362', 'chr1', '33741701', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1R7-01A', '', '3', '1', 'Out-of-frame', 'Intra-chr', '1p34.2', '1p35.1', '', '', '', '', '', '', ''), ('42996', 'PRADA', 'LARP4B_PFKFB3', 'LARP4B', 'chr10', '909683', '-', 'PFKFB3', 'chr10', '6255586', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1R7-01A', '', '2', '1', 'In-frame', 'Intra-chr', '10p15.3', '10p15.1', '', '', '', '', '', '', ''), ('42997', 'PRADA', 'ACOT11_C8B', 'ACOT11', 'chr1', '55051577', '+', 'C8B', 'chr1', '57417853', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1R7-01A', '', '9', '1', 'In-frame', 'Intra-chr', '1p32.3', '1p32.2', '', '', '', '', '', '', ''), ('42998', 'PRADA', 'TAF4_FAF1', 'TAF4', 'chr20', '60587871', '-', 'FAF1', 'chr1', '51050483', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1R7-01A', '', '26', '1', 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'11p13', '11p13', '', '', '', '', '', '', ''), ('43007', 'PRADA', 'PLIN1_ACSL6', 'PLIN1', 'chr15', '90212731', '-', 'ACSL6', 'chr5', '131321151', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1RC-01A', '', '18', '1', 'In-frame', 'Inter-chr', '15q26.1', '5q31.1', '', '', '', '', '', '', ''), ('43008', 'PRADA', 'GPR126_CLSTN2', 'GPR126', 'chr6', '142630781', '+', 'CLSTN2', 'chr3', '139894793', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1RE-01A', '', '14', '1', 'Out-of-frame', 'Inter-chr', '6q24.1', '3q23', '', '', '', 'Receptor', '', '', ''), ('43009', 'PRADA', 'AKD1_FAM184A', 'AKD1', 'chr6', '109962721', '-', 'FAM184A', 'chr6', '119345978', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1RF-01A', '', '7', '2', 'In-frame', 'Intra-chr', '6q21', '6q22.31', '', '', '', '', '', '', ''), ('43010', 'PRADA', 'OSTM1_C6orf204', 'OSTM1', 'chr6', '108395454', '-', 'C6orf204', 'chr6', '118953774', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1RF-01A', '', '13', '1', 'Out-of-frame', 'Intra-chr', '6q21', '6q22.31', '', '', '', '', '', '', ''), ('43011', 'PRADA', 'C19orf55_IGFLR1', 'C19orf55', 'chr19', '36250892', '+', 'IGFLR1', 'chr19', '36230527', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1RF-01A', '', '13', '1', 'Out-of-frame', 'Intra-chr', '19q13.12', '19q13.12', '', '', '', '', '', '', ''), ('43012', 'PRADA', 'MAN1A1_PDSS2', 'MAN1A1', 'chr6', '119669628', '-', 'PDSS2', 'chr6', '107475981', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1RF-01A', '', '13', '1', 'In-frame', 'Intra-chr', '6q22.31', '6q21', '', '', '', '', '', '', ''), ('43013', 'PRADA', 'SUPT5H_SIPA1L3', 'SUPT5H', 'chr19', '39936605', '+', 'SIPA1L3', 'chr19', '38643480', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1RF-01A', '', '131', '2', 'Out-of-frame', 'Intra-chr', '19q13.2', '19q13.13', '', '', '', '', '', '', ''), ('43014', 'PRADA', 'SPAG9_FAM117A', 'SPAG9', 'chr17', '49197715', '-', 'FAM117A', 'chr17', '47797798', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A1RF-01A', '', '63', '1', 'In-frame', 'Intra-chr', '17q21.33', '17q21.33', '', 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'16q12.1', '16q12.1', '', '', '', '', '', '', ''), ('43069', 'PRADA', 'SYNJ2_CDK19', 'SYNJ2', 'chr6', '158487667', '+', 'CDK19', 'chr6', '111067404', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A248-01A', '', '3', '2', 'Out-of-frame', 'Intra-chr', '6q25.3', '6q21', 'Kinase', '', '', '', '', '', ''), ('43070', 'PRADA', 'ARID1B_PLEKHG1', 'ARID1B', 'chr6', '157256710', '+', 'PLEKHG1', 'chr6', '151089774', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A248-01A', '', '125', '2', 'In-frame', 'Intra-chr', '6q25.3', '6q25.1', '', '', '', '', '', '', ''), ('43071', 'PRADA', 'IGF2R_PREP', 'IGF2R', 'chr6', '160461756', '+', 'PREP', 'chr6', '105845802', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A248-01A', '', '9', '1', 'Out-of-frame', 'Intra-chr', '6q25.3', '6q21', 'Kinase', '', '', '', '', '', ''), ('43072', 'PRADA', 'LTV1_ATG5', 'LTV1', 'chr6', '144167361', '+', 'ATG5', 'chr6', '106649964', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A248-01A', '', '235', '2', 'In-frame', 'Intra-chr', '6q24.2', '6q21', '', '', '', '', '', '', ''), ('43073', 'PRADA', 'TBCD_FOXK2', 'TBCD', 'chr17', '80828256', '+', 'FOXK2', 'chr17', '80521230', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A248-01A', '', '2', '1', 'In-frame', 'Intra-chr', '17q25.3', '17q25.3', '', '', '', '', '', '', ''), ('43074', 'PRADA', 'C10orf18_NET1', 'C10orf18', 'chr10', '5803434', '+', 'NET1', 'chr10', '5471133', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A248-01A', '', '5', '1', 'Out-of-frame', 'Intra-chr', '10p15.1', '10p15.1', '', '', '', '', '', '', ''), ('43075', 'PRADA', 'SYNJ2_ZDHHC14', 'SYNJ2', 'chr6', '158403120', '+', 'ZDHHC14', 'chr6', '157963617', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A248-01A', '', '25', '2', 'Out-of-frame', 'Intra-chr', '6q25.3', '6q25.3', '', '', '', '', '', '', ''), ('43076', 'PRADA', 'ZNF14_RGL3', 'ZNF14', 'chr19', '19843765', '-', 'RGL3', 'chr19', '11513382', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-E9-A295-01A', '', '5', '1', 'In-frame', 'Intra-chr', '19p13.11', '19p13.2', '', '', '', '', '', '', ''), ('43077', 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'TCGA-EW-A1PA-01A', '', '2', '1', 'Out-of-frame', 'Inter-chr', '20q13.33', '19q13.42', '', '', '', '', '', '', ''), ('43126', 'PRADA', 'TMEM104_DNAI2', 'TMEM104', 'chr17', '72791771', '+', 'DNAI2', 'chr17', '72310260', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1PA-01A', '', '48', '1', 'Out-of-frame', 'Intra-chr', '17q25.1', '17q25.1', '', '', '', '', '', '', ''), ('43127', 'PRADA', 'PGS1_BIRC5', 'PGS1', 'chr17', '76395618', '+', 'BIRC5', 'chr17', '76219546', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1PB-01A', '', '27', '1', 'Out-of-frame', 'Intra-chr', '17q25.3', '17q25.3', '', '', '', '', '', '', ''), ('43128', 'PRADA', 'KDM2A_RHOD', 'KDM2A', 'chr11', '66888829', '+', 'RHOD', 'chr11', '66833367', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1PB-01A', '', '19', '2', 'In-frame', 'Intra-chr', '11q13.2', '11q13.2', '', '', '', '', '', '', ''), ('43129', 'PRADA', 'IGF2BP2_NCEH1', 'IGF2BP2', 'chr3', '185540941', '-', 'NCEH1', 'chr3', '172365904', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1PB-01A', '', '2', '1', 'Out-of-frame', 'Intra-chr', '3q27.2', '3q26.31', '', '', '', '', '', '', ''), ('43130', 'PRADA', 'ETV6_YTHDF2', 'ETV6', 'chr12', '11992238', '+', 'YTHDF2', 'chr1', '29095441', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1PB-01A', '', '14', '2', 'Out-of-frame', 'Inter-chr', '12p13.2', '1p35.3', '', '', '', '', '', '', ''), ('43131', 'PRADA', 'RPS6KB1_VMP1', 'RPS6KB1', 'chr17', '57970686', '+', 'VMP1', 'chr17', '57842332', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1PB-01A', '', '2', '1', 'In-frame', 'Intra-chr', '17q23.1', '17q23.1', '', '', '', '', '', '', ''), ('43132', 'PRADA', 'TMEM131_TGFBRAP1', 'TMEM131', 'chr2', '98475767', '-', 'TGFBRAP1', 'chr2', '105897180', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1PC-01B', '', '4', '1', 'Out-of-frame', 'Intra-chr', '2q11.2', '2q12.1', '', '', '', '', '', '', ''), ('43133', 'PRADA', 'ZNF498_TPST1', 'ZNF498', 'chr7', '99221803', '+', 'TPST1', 'chr7', '65817492', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1PC-01B', '', '2', '1', 'Out-of-frame', 'Intra-chr', '7q22.1', '7q11.21', '', '', '', '', '', '', ''), ('43134', 'PRADA', 'TTC6_MIPOL1', 'TTC6', 'chr14', '38219048', '+', 'MIPOL1', 'chr14', '37838722', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1PC-01B', '', '5', '3', 'Out-of-frame', 'Intra-chr', '14q21.1', '14q21.1', '', '', '', '', '', '', ''), ('43135', 'PRADA', 'RP11-540D14.8_PIK3C2G', 'RP11-540D14.8', 'chr1', '155057880', '+', 'PIK3C2G', 'chr12', '18499575', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1PC-01B', '', '17', '1', 'In-frame', 'Inter-chr', '1q22', '12p12.3', '', '', '', '', '', '', ''), ('43136', 'PRADA', 'PTPN1_C3orf75', 'PTPN1', 'chr20', '49191191', '+', 'C3orf75', 'chr3', '47552716', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1PC-01B', '', '2', '1', 'In-frame', 'Inter-chr', '20q13.13', '3p21.31', '', '', '', '', '', '', ''), ('43137', 'PRADA', 'GFOD1_BCAS1', 'GFOD1', 'chr6', '13486870', '-', 'BCAS1', 'chr20', '52645511', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1PF-01A', '', '4', '1', 'In-frame', 'Inter-chr', '6p23', '20q13.2', '', '', '', '', '', '', ''), ('43138', 'PRADA', 'USP37_SAMD12', 'USP37', 'chr2', '219410944', '-', 'SAMD12', 'chr8', '119209971', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1PF-01A', '', '5', '1', 'Out-of-frame', 'Inter-chr', '2q35', '8q24.12', '', '', '', '', '', '', ''), ('43139', 'PRADA', 'BTBD3_GCNT2', 'BTBD3', 'chr20', '11900484', '+', 'GCNT2', 'chr6', '10621584', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1PF-01A', '', '3', '1', 'Out-of-frame', 'Inter-chr', '20p12.2', '6p24.2', '', '', '', '', '', '', ''), ('43140', 'PRADA', 'SAMD12_USP37', 'SAMD12', 'chr8', '119452071', '-', 'USP37', 'chr2', '219411814', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1PF-01A', '', '4', '1', 'Out-of-frame', 'Inter-chr', '8q24.12', '2q35', '', '', '', '', '', '', ''), ('43141', 'PRADA', 'ZMYND8_GTPBP1', 'ZMYND8', 'chr20', '45848909', '-', 'GTPBP1', 'chr22', '39111912', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1PF-01A', '', '92', '2', 'In-frame', 'Inter-chr', '20q13.12', '22q13.1', '', '', '', '', '', '', ''), ('43142', 'PRADA', 'STK35_CHD6', 'STK35', 'chr20', '2084011', '+', 'CHD6', 'chr20', '40113247', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1PF-01A', '', '8', '1', 'Out-of-frame', 'Intra-chr', '20p13', '20q12', 'Kinase', '', '', '', 'Transcription_Factor', '', ''), ('43143', 'PRADA', 'NCOA6_RALGAPA2', 'NCOA6', 'chr20', '33334611', '-', 'RALGAPA2', 'chr20', '20570009', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1PF-01A', '', '12', '1', 'In-frame', 'Intra-chr', '20q11.22', '20p11.23', '', '', '', '', '', '', ''), ('43144', 'PRADA', 'WHSC1L1_ADAM32', 'WHSC1L1', 'chr8', '38138985', '-', 'ADAM32', 'chr8', '39131831', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1PH-01A', '', '85', '6', 'Out-of-frame', 'Intra-chr', '8p11.23', '8p11.22', '', '', '', '', '', '', ''), ('43145', 'PRADA', 'BAG4_NEDD8', 'BAG4', 'chr8', '38034657', '+', 'NEDD8', 'chr14', '24687637', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1PH-01A', '', '131', '1', 'In-frame', 'Inter-chr', '8p11.23', '14q12', '', '', '', '', '', '', ''), ('43146', 'PRADA', 'LTBP4_MYO1B', 'LTBP4', 'chr19', '41120352', '+', 'MYO1B', 'chr2', '192278774', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1PH-01A', '', '23', '2', 'Out-of-frame', 'Inter-chr', '19q13.2', '2q32.3', '', '', '', '', '', '', ''), ('43147', 'PRADA', 'ATF6_SH2D1B', 'ATF6', 'chr1', '161772062', '+', 'SH2D1B', 'chr1', '162367105', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A1PH-01A', '', '77', '1', 'In-frame', 'Intra-chr', '1q23.3', '1q23.3', '', '', '', '', '', '', ''), ('43148', 'PRADA', 'SIK3_PPP1R1B', 'SIK3', 'chr11', '116968859', '-', 'PPP1R1B', 'chr17', '37785423', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A2FR-01A', '', '101', '1', 'In-frame', 'Inter-chr', '11q23.3', '17q12', '', '', '', '', '', '', ''), ('43149', 'PRADA', 'HAUS8_C19orf57', 'HAUS8', 'chr19', '17170367', '-', 'C19orf57', 'chr19', '14001275', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A2FR-01A', '', '11', '1', 'In-frame', 'Intra-chr', '19p13.11', '19p13.12', '', '', '', '', '', '', ''), ('43150', 'PRADA', 'DOLPP1_TBC1D13', 'DOLPP1', 'chr9', '131843486', '+', 'TBC1D13', 'chr9', '131559334', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A2FR-01A', '', '11', '2', 'Out-of-frame', 'Intra-chr', '9q34.11', '9q34.11', '', '', '', '', '', '', ''), ('43151', 'PRADA', 'AC011997.1_LRRC69', 'AC011997.1', 'chr2', '198557940', '+', 'LRRC69', 'chr8', '92212841', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A2FS-01A', '', '3', '1', 'Out-of-frame', 'Inter-chr', '2q33.1', '8q21.3', '', '', '', '', '', '', ''), ('43152', 'PRADA', 'BAX_DHDH', 'BAX', 'chr19', '49459590', '+', 'DHDH', 'chr19', '49438257', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A2FS-01A', '', '9', '1', 'In-frame', 'Intra-chr', '19q13.33', '19q13.33', '', '', '', '', '', '', ''), ('43153', 'PRADA', 'SHANK2_ARHGEF17', 'SHANK2', 'chr11', '70544793', '-', 'ARHGEF17', 'chr11', '73057928', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A2FS-01A', '', '6', '2', 'Out-of-frame', 'Intra-chr', '11q13.4', '11q13.4', '', '', '', '', '', '', ''), ('43154', 'PRADA', 'THSD4_LRRC49', 'THSD4', 'chr15', '71447271', '+', 'LRRC49', 'chr15', '71272440', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A2FS-01A', '', '45', '6', 'In-frame', 'Intra-chr', '15q23', '15q23', '', '', '', '', '', '', ''), ('43155', 'PRADA', 'NBR1_RUNDC3A', 'NBR1', 'chr17', '41355803', '+', 'RUNDC3A', 'chr17', '42395464', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A2FS-01A', '', '8', '1', 'Out-of-frame', 'Intra-chr', '17q21.31', '17q21.31', '', '', '', '', '', '', ''), ('43156', 'PRADA', 'APPBP2_SEPT9', 'APPBP2', 'chr17', '58577760', '-', '9.Sep', 'chr17', '75486824', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A2FS-01A', '', '2', '1', 'In-frame', 'Intra-chr', '17q23.2', '17q25.3', '', '', '', '', '', '', ''), ('43157', 'PRADA', 'EXOC7_USP22', 'EXOC7', 'chr17', '74097352', '-', 'USP22', 'chr17', '20911309', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A2FS-01A', '', '3', '1', 'Out-of-frame', 'Intra-chr', '17q25.1', '17p11.2', '', '', '', '', '', '', ''), ('43158', 'PRADA', 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'', '', '', '', '', '', '');
INSERT INTO `ChimerSeq_dump` VALUES ('43191', 'PRADA', 'UBE2Z_UTP18', 'UBE2Z', 'chr17', '47000299', '+', 'UTP18', 'chr17', '49371264', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A6SC-01A', '', '63', '1', 'In-frame', 'Intra-chr', '17q21.32', '17q21.33', '', '', '', '', '', '', ''), ('43192', 'PRADA', 'LRBA_PPARGC1A', 'LRBA', 'chr4', '151935579', '-', 'PPARGC1A', 'chr4', '23886554', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A6SD-01A', '', '13', '1', 'In-frame', 'Intra-chr', '4q31.3', '4p15.2', '', '', '', '', '', '', ''), ('43193', 'PRADA', 'SRPK1_ANKRD42', 'SRPK1', 'chr6', '35888245', '-', 'ANKRD42', 'chr11', '82938789', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A6SD-01A', '', '18', '3', 'Out-of-frame', 'Inter-chr', '6p21.31', '11q14.1', '', '', '', '', '', '', ''), ('43194', 'PRADA', 'REV3L_ARHGEF25', 'REV3L', 'chr6', '111803953', '-', 'ARHGEF25', 'chr12', '58008472', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-EW-A6SD-01A', '', '4', '1', 'Out-of-frame', 'Inter-chr', '6q21', '12q13.3', '', '', '', 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'', '', '', '', '', '', ''), ('43244', 'PRADA', 'MAK_ELOVL2', 'MAK', 'chr6', '10784657', '-', 'ELOVL2', 'chr6', '10984139', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-JL-A3YW-01A', '', '2', '1', 'Out-of-frame', 'Intra-chr', '6p24.2', '6p24.2', '', '', '', '', '', '', ''), ('43245', 'PRADA', 'RPS6KB1_VMP1', 'RPS6KB1', 'chr17', '57970686', '+', 'VMP1', 'chr17', '57915656', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-JL-A3YW-01A', '', '350', '2', 'Out-of-frame', 'Intra-chr', '17q23.1', '17q23.1', '', '', '', '', '', '', ''), ('43246', 'PRADA', 'NFIA_FGGY', 'NFIA', 'chr1', '61849037', '+', 'FGGY', 'chr1', '60125891', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-JL-A3YW-01A', '', '10', '1', 'Out-of-frame', 'Intra-chr', '1p31.3', '1p32.1', 'Kinase', '', '', '', 'Transcription_Factor', '', ''), ('43247', 'PRADA', 'SCMH1_EIF2B3', 'SCMH1', 'chr1', '41578955', '-', 'EIF2B3', 'chr1', '45316675', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-JL-A3YW-01A', '', '11', '1', 'In-frame', 'Intra-chr', '1p34.2', '1p34.1', '', '', '', '', '', '', ''), ('43248', 'PRADA', 'KATNA1_LATS1', 'KATNA1', 'chr6', '149944239', '-', 'LATS1', 'chr6', '150005728', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-JL-A3YW-01A', '', '2', '1', 'Out-of-frame', 'Intra-chr', '6q25.1', '6q25.1', '', '', '', '', '', '', ''), ('43249', 'PRADA', 'RAPGEF5_STEAP1B', 'RAPGEF5', 'chr7', '22232985', '-', 'STEAP1B', 'chr7', '22459455', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-JL-A3YW-01A', '', '29', '1', 'Out-of-frame', 'Intra-chr', '7p15.3', '7p15.3', '', '', '', '', '', '', ''), ('43250', 'PRADA', 'SULT1B1_CSN2', 'SULT1B1', 'chr4', '70596219', '-', 'CSN2', 'chr4', '70825797', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-JL-A3YW-01A', '', '5', '2', 'Out-of-frame', 'Intra-chr', '4q13.3', '4q13.3', '', '', '', '', '', '', ''), ('43251', 'PRADA', 'SHB_SLC28A3', 'SHB', 'chr9', '38067926', '-', 'SLC28A3', 'chr9', '86928369', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-JL-A3YW-01A', '', '5', '2', 'In-frame', 'Intra-chr', '9p13.2', '9q21.33', '', '', '', '', '', '', ''), ('43252', 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'chr17', '37604051', '-', 'ODF3L2', 'chr19', '464364', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-LL-A5YN-01A', '', '60', '1', 'Out-of-frame', 'Inter-chr', '17q12', '19p13.3', '', '', '', '', '', '', ''), ('43257', 'PRADA', 'HERC1_KIAA0101', 'HERC1', 'chr15', '63970044', '-', 'KIAA0101', 'chr15', '64658274', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-LL-A5YN-01A', '', '19', '1', 'In-frame', 'Intra-chr', '15q22.31', '15q22.31', '', '', '', '', '', '', ''), ('43258', 'PRADA', 'BSPRY_NPM1', 'BSPRY', 'chr9', '116123017', '+', 'NPM1', 'chr5', '170837531', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-LL-A5YO-01A', '', '8', '1', 'In-frame', 'Inter-chr', '9q32', '5q35.1', '', '', '', '', 'Transcription_Factor', '', ''), ('43259', 'PRADA', 'TC2N_FBLN5', 'TC2N', 'chr14', '92278656', '-', 'FBLN5', 'chr14', '92361416', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-LL-A5YO-01A', '', '2', '1', 'In-frame', 'Intra-chr', '14q32.12', '14q32.12', '', '', '', '', '', '', ''), ('43260', 'PRADA', 'TRPV6_KEL', 'TRPV6', 'chr7', '142583134', '-', 'KEL', 'chr7', '142640970', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-LL-A5YO-01A', '', '42', '1', 'Out-of-frame', 'Intra-chr', '7q34', '7q34', '', '', '', '', '', '', ''), ('43261', 'PRADA', 'ADCY9_PRSS27', 'ADCY9', 'chr16', '4038995', '-', 'PRSS27', 'chr16', '2766527', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-LL-A5YP-01A', '', '3', '1', 'Out-of-frame', 'Intra-chr', '16p13.3', '16p13.3', '', '', '', '', '', '', ''), ('43262', 'PRADA', 'PIGK_ST6GALNAC3', 'PIGK', 'chr1', '77620134', '-', 'ST6GALNAC3', 'chr1', '76877693', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-LL-A6FP-01A', '', '4', '1', 'Out-of-frame', 'Intra-chr', '1p31.1', '1p31.1', '', '', '', '', '', '', ''), ('43263', 'PRADA', 'CELF1_LUZP2', 'CELF1', 'chr11', '47521005', '-', 'LUZP2', 'chr11', '25071584', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-LL-A6FQ-01A', '', '2', '2', 'Out-of-frame', 'Intra-chr', '11p11.2', '11p14.3', '', '', '', '', '', '', ''), ('43264', 'PRADA', 'C11orf49_PPME1', 'C11orf49', 'chr11', '46958402', '+', 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'Exonic', 'hg19', 'BRCA', 'TCGA-LL-A740-01A', '', '2', '1', 'Out-of-frame', 'Intra-chr', '2p23.3', '2p23.3', '', '', '', '', '', '', ''), ('43269', 'PRADA', 'HIVEP1_DST', 'HIVEP1', 'chr6', '12136125', '+', 'DST', 'chr6', '56325052', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-LL-A740-01A', '', '15', '2', 'Out-of-frame', 'Intra-chr', '6p24.1', '6p12.1', '', '', '', '', '', '', ''), ('43270', 'PRADA', 'RANBP3_N6AMT2', 'RANBP3', 'chr19', '5951404', '-', 'N6AMT2', 'chr13', '21311944', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-MS-A51U-01A', '', '40', '5', 'In-frame', 'Inter-chr', '19p13.3', '13q12.11', '', '', '', '', '', '', ''), ('43271', 'PRADA', 'NEK7_INTS7', 'NEK7', 'chr1', '198233365', '+', 'INTS7', 'chr1', '212115453', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OK-A5Q2-01A', '', '5', '2', 'In-frame', 'Intra-chr', '1q31.3', '1q32.3', '', '', '', '', '', '', ''), ('43272', 'PRADA', 'MACF1_GRIK3', 'MACF1', 'chr1', '39696915', '+', 'GRIK3', 'chr1', '37307540', '-', 'Exonic', 'hg19', 'BRCA', 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'13', '1', 'Out-of-frame', 'Inter-chr', '4q12', '19p13.3', '', '', '', '', '', '', ''), ('43277', 'PRADA', 'GLYCTK_ALAS1', 'GLYCTK', 'chr3', '52325127', '+', 'ALAS1', 'chr3', '52245299', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5D7-01A', '', '13', '1', 'In-frame', 'Intra-chr', '3p21.1', '3p21.2', '', '', '', '', '', '', ''), ('43278', 'PRADA', 'AFAP1_ABLIM2', 'AFAP1', 'chr4', '7857193', '-', 'ABLIM2', 'chr4', '8099009', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5D7-01A', '', '10', '1', 'In-frame', 'Intra-chr', '4p16.1', '4p16.1', '', '', '', '', '', '', ''), ('43279', 'PRADA', 'FRYL_DTD1', 'FRYL', 'chr4', '48621291', '-', 'DTD1', 'chr20', '18724744', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5D7-01A', '', '60', '1', 'In-frame', 'Inter-chr', '4p11', '20p11.23', '', '', '', '', '', '', ''), ('43280', 'PRADA', 'PIP5K1C_PALM', 'PIP5K1C', 'chr19', '3660964', '-', 'PALM', 'chr19', '746285', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5D7-01A', '', '34', '2', 'Out-of-frame', 'Intra-chr', '19p13.3', '19p13.3', '', '', '', '', '', '', ''), ('43281', 'PRADA', 'MAN1A2_CD101', 'MAN1A2', 'chr1', '118009049', '+', 'CD101', 'chr1', '117576482', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5D7-01A', '', '96', '1', 'In-frame', 'Intra-chr', '1p12', '1p13.1', '', '', '', '', '', '', ''), ('43282', 'PRADA', 'PIK3R3_LRRC41', 'PIK3R3', 'chr1', '46527601', '-', 'LRRC41', 'chr1', '46747057', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5D7-01A', '', '8', '1', 'Out-of-frame', 'Intra-chr', '1p34.1', '1p34.1', '', '', '', '', '', '', ''), ('43283', 'PRADA', 'CHAF1A_CCDC94', 'CHAF1A', 'chr19', '4428887', '+', 'CCDC94', 'chr19', '4261991', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5D7-01A', '', '98', '2', 'In-frame', 'Intra-chr', '19p13.3', '19p13.3', '', '', '', '', '', '', ''), ('43284', 'PRADA', 'XPR1_FAM5C', 'XPR1', 'chr1', '180651547', '+', 'FAM5C', 'chr1', '190203607', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5D7-01A', '', '6', '1', 'Out-of-frame', 'Intra-chr', '1q25.3', '1q31.1', '', '', '', '', '', '', ''), ('43285', 'PRADA', 'MTMR1_HS1BP3', 'MTMR1', 'chrX', '149924337', '+', 'HS1BP3', 'chr2', '20840940', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5D7-01A', '', '44', '1', 'In-frame', 'Inter-chr', 'Xq28', '2p24.1', '', '', '', '', '', '', ''), ('43286', 'PRADA', 'CPD_TBX2', 'CPD', 'chr17', '28748001', '+', 'TBX2', 'chr17', '59485415', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5D8-01A', '', '8', '3', 'In-frame', 'Intra-chr', '17q11.2', '17q23.2', '', '', '', '', 'Transcription_Factor', '', ''), ('43287', 'PRADA', 'DYNC1I2_BRE', 'DYNC1I2', 'chr2', '172571953', '+', 'BRE', 'chr2', '28460069', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5D8-01A', '', '3', '2', 'Out-of-frame', 'Intra-chr', '2q31.1', '2p23.2', '', '', '', '', '', '', ''), ('43288', 'PRADA', 'SETDB1_CD46', 'SETDB1', 'chr1', '150923957', '+', 'CD46', 'chr1', '207930359', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5D8-01A', '', '19', '1', 'Out-of-frame', 'Intra-chr', '1q21.3', '1q32.2', '', '', '', '', '', '', ''), ('43289', 'PRADA', 'RRNAD1_ARNT', 'RRNAD1', 'chr1', '156699007', '+', 'ARNT', 'chr1', '150790506', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5D8-01A', '', '23', '1', 'Out-of-frame', 'Intra-chr', '1q23.1', '1q21.3', '', '', '', '', '', '', ''), ('43290', 'PRADA', 'XPR1_KIFAP3', 'XPR1', 'chr1', '180601406', '+', 'KIFAP3', 'chr1', '170007572', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5D8-01A', '', '5', '2', 'In-frame', 'Intra-chr', '1q25.3', '1q24.2', '', '', '', '', '', '', ''), ('43291', 'PRADA', 'KIFAP3_DUSP27', 'KIFAP3', 'chr1', '169993559', '-', 'DUSP27', 'chr1', '167095024', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5D8-01A', '', '6', '1', 'Out-of-frame', 'Intra-chr', '1q24.2', '1q24.1', '', '', '', '', '', '', ''), ('43292', 'PRADA', 'ARID4B_PCNXL2', 'ARID4B', 'chr1', '235420475', '-', 'PCNXL2', 'chr1', '233314921', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5D8-01A', '', '77', '2', 'In-frame', 'Intra-chr', '1q42.3', '1q42.2', '', '', '', '', '', '', ''), ('43293', 'PRADA', 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'NEGR1', 'chr1', '72748002', '-', 'C1orf173', 'chr1', '75114999', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5RW-01A', '', '7', '1', 'In-frame', 'Intra-chr', '1p31.1', '1p31.1', '', '', '', '', '', '', ''), ('43298', 'PRADA', 'AKAP9_RUNX1', 'AKAP9', 'chr7', '91699496', '+', 'RUNX1', 'chr21', '36171759', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5RW-01A', '', '3', '1', 'Out-of-frame', 'Inter-chr', '7q21.2', '21q22.12', 'Kinase', 'Oncogene', '', '', 'Transcription_Factor', '', ''), ('43299', 'PRADA', 'FAM98B_RASGRP1', 'FAM98B', 'chr15', '38773660', '+', 'RASGRP1', 'chr15', '38798121', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5RW-01A', '', '8', '1', 'In-frame', 'Intra-chr', '15q14', '15q14', '', '', '', '', '', '', ''), ('43300', 'PRADA', 'NCOA1_GOLGB1', 'NCOA1', 'chr2', '24896332', '+', 'GOLGB1', 'chr3', '121388202', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5RW-01A', '', '46', '1', 'In-frame', 'Inter-chr', '2p23.3', '3q13.33', '', '', '', '', '', '', ''), ('43301', 'PRADA', 'VPS53_RTN4RL1', 'VPS53', 'chr17', '600658', '-', 'RTN4RL1', 'chr17', '1841102', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5RW-01A', '', '2', '1', 'Out-of-frame', 'Intra-chr', '17p13.3', '17p13.3', '', '', '', '', '', '', ''), ('43302', 'PRADA', 'SPAG5_SLC47A1', 'SPAG5', 'chr17', '26912882', '-', 'SLC47A1', 'chr17', '19445706', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5RZ-01A', '', '29', '2', 'In-frame', 'Intra-chr', '17q11.2', '17p11.2', '', '', '', '', '', '', ''), ('43303', 'PRADA', 'TBC1D22B_CCND3', 'TBC1D22B', 'chr6', '37254848', '+', 'CCND3', 'chr6', '41908323', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5RZ-01A', '', '13', '2', 'In-frame', 'Intra-chr', '6p21.2', '6p21.1', '', '', '', '', '', '', ''), ('43304', 'PRADA', 'MED1_IFLTD1', 'MED1', 'chr17', '37599803', '-', 'IFLTD1', 'chr12', '25679889', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5RZ-01A', '', '16', '1', 'Out-of-frame', 'Inter-chr', '17q12', '12p12.1', '', '', '', '', '', '', ''), ('43305', 'PRADA', 'PPM1E_SPAG5', 'PPM1E', 'chr17', '57043254', '+', 'SPAG5', 'chr17', '26913200', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5RZ-01A', '', '27', '2', 'In-frame', 'Intra-chr', '17q22', '17q11.2', '', '', '', '', '', '', ''), ('43306', 'PRADA', 'ETNK1_RCAN2', 'ETNK1', 'chr12', '22778520', '+', 'RCAN2', 'chr6', '46216633', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5RZ-01A', '', '16', '1', 'In-frame', 'Inter-chr', '12p12.1', '6p12.3', '', '', '', '', '', '', ''), ('43307', 'PRADA', 'KSR1_PIPOX', 'KSR1', 'chr17', '25783900', '+', 'PIPOX', 'chr17', '27371877', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5RZ-01A', '', '7', '1', 'In-frame', 'Intra-chr', '17q11.1', '17q11.2', '', '', '', '', '', '', ''), ('43308', 'PRADA', 'FGGY_RPS6KA1', 'FGGY', 'chr1', '59978111', '+', 'RPS6KA1', 'chr1', '26863416', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5RZ-01A', '', '3', '1', 'Out-of-frame', 'Intra-chr', '1p32.1', '1p36.11', 'Kinase', '', '', '', '', '', ''), ('43309', 'PRADA', 'HELZ_TTYH2', 'HELZ', 'chr17', '65174775', '-', 'TTYH2', 'chr17', '72248373', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5RZ-01A', '', '6', '1', 'Out-of-frame', 'Intra-chr', '17q24.2', '17q25.1', '', '', '', '', '', '', ''), ('43310', 'PRADA', 'HYI_NFIA', 'HYI', 'chr1', '43917319', '-', 'NFIA', 'chr1', '61798184', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5RZ-01A', '', '9', '1', 'In-frame', 'Intra-chr', '1p34.2', '1p31.3', '', '', '', '', '', '', ''), ('43311', 'PRADA', 'TBC1D4_COMMD6', 'TBC1D4', 'chr13', '76055406', '-', 'COMMD6', 'chr13', '76104402', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5S0-01A', '', '47', '2', 'In-frame', 'Intra-chr', '13q22.2', '13q22.2', '', '', '', '', '', '', ''), ('43312', 'PRADA', 'MNAT1_C14orf135', 'MNAT1', 'chr14', '61264878', '+', 'C14orf135', 'chr14', '60600688', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A5S0-01A', '', '4', '1', 'Out-of-frame', 'Intra-chr', '14q23.1', '14q23.1', '', '', '', '', '', '', ''), ('43313', 'PRADA', 'C19orf6_CCDC25', 'C19orf6', 'chr19', '1020771', '-', 'CCDC25', 'chr8', '27610104', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A66I-01A', '', '11', '2', 'In-frame', 'Inter-chr', '19p13.3', '8p21.1', '', '', '', '', '', '', ''), ('43314', 'PRADA', 'IL28RA_C1orf201', 'IL28RA', 'chr1', '24507221', '-', 'C1orf201', 'chr1', '24710493', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A66I-01A', '', '6', '1', 'Out-of-frame', 'Intra-chr', '1p36.11', '1p36.11', '', '', '', '', '', '', ''), ('43315', 'PRADA', 'STK11_SMARCD2', 'STK11', 'chr19', '1207202', '+', 'SMARCD2', 'chr17', '61914985', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A66I-01A', '', '9', '1', 'Out-of-frame', 'Inter-chr', '19p13.3', '17q23.3', '', '', '', '', '', '', ''), ('43316', 'PRADA', 'CREBBP_ZNF500', 'CREBBP', 'chr16', '3929833', '-', 'ZNF500', 'chr16', '4803059', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A66I-01A', '', '3', '1', 'In-frame', 'Intra-chr', '16p13.3', '16p13.3', '', '', '', '', '', '', ''), ('43317', 'PRADA', 'ASCC1_MICU1', 'ASCC1', 'chr10', '73956569', '-', 'MICU1', 'chr10', '74183129', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A66I-01A', '', '24', '1', 'In-frame', 'Intra-chr', '10q22.1', '10q22.1', '', '', '', '', '', '', ''), ('43318', 'PRADA', 'PAH_NINJ2', 'PAH', 'chr12', '103306569', '-', 'NINJ2', 'chr12', '675344', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A66I-01A', '', '20', '1', 'In-frame', 'Intra-chr', '12q23.2', '12p13.33', '', '', '', '', '', '', ''), ('43319', 'PRADA', 'ATAD2_RAD51B', 'ATAD2', 'chr8', '124381298', '-', 'RAD51B', 'chr14', '68758601', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A66I-01A', '', '6', '1', 'Out-of-frame', 'Inter-chr', '8q24.13', '14q24.1', '', '', '', '', '', '', ''), ('43320', 'PRADA', 'TMEM123_MMP20', 'TMEM123', 'chr11', '102319543', '-', 'MMP20', 'chr11', '102480761', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A66I-01A', '', '8', '1', 'In-frame', 'Intra-chr', '11q22.2', '11q22.2', '', '', '', '', '', '', ''), ('43321', 'PRADA', 'UBE2J2_ACAP3', 'UBE2J2', 'chr1', '1203242', '-', 'ACAP3', 'chr1', '1229579', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A66I-01A', '', '123', '5', 'Out-of-frame', 'Intra-chr', '1p36.33', '1p36.33', '', '', '', '', '', '', ''), ('43322', 'PRADA', 'MED25_MAPK15', 'MED25', 'chr19', '50335672', '+', 'MAPK15', 'chr8', '144799864', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A66I-01A', '', '16', '1', 'In-frame', 'Inter-chr', '19q13.33', '8q24.3', 'Kinase', '', '', '', 'Transcription_Factor', '', ''), ('43323', 'PRADA', 'BUB1B_EIF2AK4', 'BUB1B', 'chr15', '40453456', '+', 'EIF2AK4', 'chr15', '40321607', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A66I-01A', '', '8', '3', 'In-frame', 'Intra-chr', '15q15.1', '15q15.1', 'Kinase', '', '', '', '', '', ''), ('43324', 'PRADA', 'CTD-2589C9.4_FOXR1', 'CTD-2589C9.4', 'chr11', '118960470', '+', 'FOXR1', 'chr11', '118849492', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A66I-01A', '', '3', '1', 'Out-of-frame', 'Intra-chr', '11q23.3', '11q23.3', '', '', '', '', '', '', ''), ('43325', 'PRADA', 'WHSC1L1_PLEKHA2', 'WHSC1L1', 'chr8', '38146005', '-', 'PLEKHA2', 'chr8', '38826939', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A66J-01A', '', '5', '1', 'In-frame', 'Intra-chr', '8p11.23', '8p11.22', '', '', '', '', '', '', ''), ('43326', 'PRADA', 'CCM2_C7orf10', 'CCM2', 'chr7', '45039962', '+', 'C7orf10', 'chr7', '40899915', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A66P-01A', '', '14', '1', 'Out-of-frame', 'Intra-chr', '7p13', '7p14.1', '', '', '', '', '', '', ''), ('43327', 'PRADA', 'FAM111B_GLYATL1', 'FAM111B', 'chr11', '58877179', '+', 'GLYATL1', 'chr11', '58714519', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A66P-01A', '', '63', '3', 'Out-of-frame', 'Intra-chr', '11q12.1', '11q12.1', '', '', '', '', '', '', ''), ('43328', 'PRADA', 'SPDEF_C6orf106', 'SPDEF', 'chr6', '34511797', '-', 'C6orf106', 'chr6', '34574681', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A66P-01A', '', '7', '1', 'In-frame', 'Intra-chr', '6p21.31', '6p21.31', '', '', '', '', '', '', ''), ('43329', 'PRADA', 'KHDC1_OOEP', 'KHDC1', 'chr6', '74001721', '-', 'OOEP', 'chr6', '74079108', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A66P-01A', '', '4', '3', 'Out-of-frame', 'Intra-chr', '6q13', '6q13', '', '', '', '', '', '', ''), ('43330', 'PRADA', 'ATF7_ATP5G2', 'ATF7', 'chr12', '53994737', '-', 'ATP5G2', 'chr12', '54063732', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A66P-01A', '', '45', '1', 'In-frame', 'Intra-chr', '12q13.13', '12q13.13', '', '', '', '', 'Transcription_Factor', '', ''), ('43331', 'PRADA', 'PARD3_CUL2', 'PARD3', 'chr10', '34985246', '-', 'CUL2', 'chr10', '35305322', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A66P-01A', '', '3', '1', 'Out-of-frame', 'Intra-chr', '10p11.21', '10p11.21', '', '', '', '', '', '', ''), ('43332', 'PRADA', 'GOLGB1_IQCB1', 'GOLGB1', 'chr3', '121400534', '-', 'IQCB1', 'chr3', '121509062', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A66P-01A', '', '3', '1', 'In-frame', 'Intra-chr', '3q13.33', '3q13.33', '', '', '', '', '', '', ''), ('43333', 'PRADA', 'CXCL16_TEKT1', 'CXCL16', 'chr17', '4641703', '-', 'TEKT1', 'chr17', '6722677', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A66P-01A', '', '3', '1', 'In-frame', 'Intra-chr', '17p13.2', '17p13.1', '', '', '', '', '', '', ''), ('43334', 'PRADA', 'OSGIN2_RIPK2', 'OSGIN2', 'chr8', '90926974', '+', 'RIPK2', 'chr8', '90775057', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A6VO-01A', '', '4', '1', 'Out-of-frame', 'Intra-chr', '8q21.3', '8q21.3', '', '', '', '', '', '', ''), ('43335', 'PRADA', 'CD2AP_MUTED', 'CD2AP', 'chr6', '47522502', '+', 'MUTED', 'chr6', '8016061', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A6VO-01A', '', '32', '1', 'Out-of-frame', 'Intra-chr', '6p12.3', '6p24.3', '', '', '', '', '', '', ''), ('43336', 'PRADA', 'CAMK1D_FAM188A', 'CAMK1D', 'chr10', '12708809', '+', 'FAM188A', 'chr10', '15824225', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A6VO-01A', '', '15', '1', 'Out-of-frame', 'Intra-chr', '10p13', '10p13', '', '', '', '', '', '', ''), ('43337', 'PRADA', 'ENPP1_RIPPLY2', 'ENPP1', 'chr6', '132129415', '+', 'RIPPLY2', 'chr6', '84563816', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A6VO-01A', '', '2', '2', 'In-frame', 'Intra-chr', '6q23.2', '6q14.2', '', '', '', '', '', '', ''), ('43338', 'PRADA', 'MBOAT1_FYN', 'MBOAT1', 'chr6', '20212367', '-', 'FYN', 'chr6', '111983150', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-OL-A6VO-01A', '', '31', '1', 'Out-of-frame', 'Intra-chr', '6p22.3', '6q21', 'Kinase', '', '', '', '', '', ''), ('43339', 'PRADA', 'PAPOLA_GALNT5', 'PAPOLA', 'chr14', '96968937', '+', 'GALNT5', 'chr2', '158140794', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-PE-A5DC-01A', '', '7', '1', 'In-frame', 'Inter-chr', '14q32.2', '2q24.1', '', '', '', '', '', '', ''), ('43340', 'PRADA', 'MGAT4A_C2orf55', 'MGAT4A', 'chr2', '99342702', '-', 'C2orf55', 'chr2', '99449460', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-PE-A5DC-01A', '', '34', '3', 'Out-of-frame', 'Intra-chr', '2q11.2', '2q11.2', '', '', '', '', '', '', ''), ('43341', 'PRADA', 'LRP5_ALKBH5', 'LRP5', 'chr11', '68080273', '+', 'ALKBH5', 'chr17', '18098269', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-PE-A5DC-01A', '', '6', '1', 'Out-of-frame', 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'6p21.2', '', '', '', '', '', '', ''), ('43346', 'PRADA', 'CHD8_IMPG1', 'CHD8', 'chr14', '21894287', '-', 'IMPG1', 'chr6', '76744504', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-PE-A5DD-01A', '', '6', '1', 'Out-of-frame', 'Inter-chr', '14q11.2', '6q14.1', '', '', '', '', '', '', ''), ('43347', 'PRADA', 'SNAP29_IGLL1', 'SNAP29', 'chr22', '21224821', '+', 'IGLL1', 'chr22', '23917269', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-PE-A5DE-01A', '', '88', '3', 'In-frame', 'Intra-chr', '22q11.21', '22q11.23', '', '', '', '', '', '', ''), ('43348', 'PRADA', 'CCDC149_GABRB1', 'CCDC149', 'chr4', '24914439', '-', 'GABRB1', 'chr4', '47033931', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-S3-A6ZF-01A', '', '4', '1', 'Out-of-frame', 'Intra-chr', '4p15.2', '4p12', '', '', '', '', '', '', ''), ('43349', 'PRADA', 'BLNK_PIK3AP1', 'BLNK', 'chr10', '97976409', '-', 'PIK3AP1', 'chr10', '98388250', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-S3-A6ZF-01A', '', '8', '3', 'In-frame', 'Intra-chr', '10q24.1', '10q24.1', '', '', '', '', '', '', ''), ('43350', 'PRADA', 'CD99L2_CXorf66', 'CD99L2', 'chrX', '150066995', '-', 'CXorf66', 'chrX', '139040376', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-S3-A6ZF-01A', '', '24', '1', 'In-frame', 'Intra-chr', 'Xq28', 'Xq27.1', '', '', '', '', '', '', ''), ('43351', 'PRADA', 'TRPC4AP_TOX2', 'TRPC4AP', 'chr20', '33597990', '-', 'TOX2', 'chr20', '42695370', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-S3-A6ZF-01A', '', '21', '3', 'Out-of-frame', 'Intra-chr', '20q11.22', '20q13.12', '', '', '', '', '', '', ''), ('43352', 'PRADA', 'VBP1_BRCC3', 'VBP1', 'chrX', '154444852', '+', 'BRCC3', 'chrX', '154300602', '+', 'Exonic', 'hg19', 'BRCA', 'TCGA-S3-A6ZG-01A', '', '4', '1', 'In-frame', 'Intra-chr', 'Xq28', 'Xq28', '', '', '', '', '', '', ''), ('43353', 'PRADA', 'HHAT_RFWD2', 'HHAT', 'chr1', '210797014', '+', 'RFWD2', 'chr1', '175916375', '-', 'Exonic', 'hg19', 'BRCA', 'TCGA-S3-A6ZG-01A', '', '7', '1', 'Out-of-frame', 'Intra-chr', '1q32.2', '1q25.1', '', '', '', '', '', '', ''), ('43354', 'PRADA', 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'2', '1', 'In-frame', 'Intra-chr', '16p12.1', '16p12.2', '', '', '', '', '', '', ''), ('43420', 'PRADA', 'ATG5_PDSS2', 'ATG5', 'chr6', '106649847', '-', 'PDSS2', 'chr6', '107475981', '-', 'Exonic', 'hg19', 'GBM', 'TCGA-06-1804-01A', '', '3', '1', 'Out-of-frame', 'Intra-chr', '6q21', '6q21', '', '', '', '', '', '', ''), ('43421', 'PRADA', 'TDRD3_ESD', 'TDRD3', 'chr13', '61109367', '+', 'ESD', 'chr13', '47345631', '-', 'Exonic', 'hg19', 'GBM', 'TCGA-06-1804-01A', '', '5', '1', 'In-frame', 'Intra-chr', '13q21.2', '13q14.2', '', '', '', '', '', '', ''), ('43422', 'PRADA', 'DIP2B_TMBIM6', 'DIP2B', 'chr12', '50899023', '+', 'TMBIM6', 'chr12', '50146247', '+', 'Exonic', 'hg19', 'GBM', 'TCGA-06-1804-01A', '', '4', '1', 'Out-of-frame', 'Intra-chr', '12q13.12', '12q13.12', '', '', '', '', '', '', ''), ('43423', 'PRADA', 'RAVER1_DOCK6', 'RAVER1', 'chr19', '10439318', '-', 'DOCK6', 'chr19', '11356554', '-', 'Exonic', 'hg19', 'GBM', 'TCGA-06-1804-01A', '', '2', '2', 'Out-of-frame', 'Intra-chr', '19p13.2', '19p13.2', '', '', '', '', '', '', ''), ('43424', 'PRADA', 'CASD1_VWC2', 'CASD1', 'chr7', '94147635', '+', 'VWC2', 'chr7', '49951630', '+', 'Exonic', 'hg19', 'GBM', 'TCGA-06-2557-01A', '', '8', '3', 'Out-of-frame', 'Intra-chr', '7q21.3', '7p12.2', '', '', '', '', '', '', ''), ('43425', 'PRADA', 'AKAP11_MRPS31', 'AKAP11', 'chr13', '42882745', '+', 'MRPS31', 'chr13', '41303737', '-', 'Exonic', 'hg19', 'GBM', 'TCGA-06-2558-01A', '', '11', '1', 'Out-of-frame', 'Intra-chr', '13q14.11', '13q14.11', '', '', '', '', '', '', ''), ('43426', 'PRADA', 'VWC2_RAB20', 'VWC2', 'chr7', '49815727', '+', 'RAB20', 'chr13', '111176544', '-', 'Exonic', 'hg19', 'GBM', 'TCGA-06-2558-01A', '', '2', '1', 'Out-of-frame', 'Inter-chr', '7p12.2', '13q34', '', '', '', '', '', '', ''), ('43427', 'PRADA', 'AASDH_LRRC66', 'AASDH', 'chr4', '57217508', '-', 'LRRC66', 'chr4', '52869558', '-', 'Exonic', 'hg19', 'GBM', 'TCGA-06-2559-01A', '', '5', '4', 'Out-of-frame', 'Intra-chr', '4q12', '4q12', '', '', '', '', '', '', ''), ('43428', 'PRADA', 'CTDSP2_DCUN1D4', 'CTDSP2', 'chr12', '58240155', '-', 'DCUN1D4', 'chr4', '52765436', '+', 'Exonic', 'hg19', 'GBM', 'TCGA-06-2559-01A', '', '12', '4', 'Out-of-frame', 'Inter-chr', '12q14.1', '4q12', '', '', '', '', '', '', ''), ('43429', 'PRADA', 'LRP5_ATG16L2', 'LRP5', 'chr11', '68207384', '+', 'ATG16L2', 'chr11', '72539404', '+', 'Exonic', 'hg19', 'GBM', 'TCGA-06-2561-01A', '', '2', '1', 'Out-of-frame', 'Intra-chr', '11q13.2', '11q13.4', '', '', '', '', '', '', ''), ('43430', 'PRADA', 'MFSD6_CALCRL', 'MFSD6', 'chr2', '191302287', '+', 'CALCRL', 'chr2', '188228229', '-', 'Exonic', 'hg19', 'GBM', 'TCGA-06-2561-01A', '', '2', '1', 'In-frame', 'Intra-chr', '2q32.2', '2q32.1', '', '', '', 'Receptor', '', '', ''), ('43431', 'PRADA', 'ENTPD7_IDE', 'ENTPD7', 'chr10', '101439632', '+', 'IDE', 'chr10', '94250352', '-', 'Exonic', 'hg19', 'GBM', 'TCGA-06-2563-01A', '', '8', '1', 'In-frame', 'Intra-chr', '10q24.2', '10q23.33', '', '', '', '', '', '', ''), ('43432', 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'chr16', '74942806', '-', 'ASB9', 'chrX', '15272966', '-', 'Exonic', 'hg19', 'GBM', 'TCGA-06-2569-01A', '', '2', '1', 'Out-of-frame', 'Inter-chr', '16q23.1', 'Xp22.2', '', '', '', '', '', '', ''), ('43437', 'PRADA', 'NFASC_NTRK1', 'NFASC', 'chr1', '204951148', '+', 'NTRK1', 'chr1', '156844363', '+', 'Exonic', 'hg19', 'GBM', 'TCGA-06-5411-01A', '', '168', '1', 'In-frame', 'Intra-chr', '1q32.1', '1q23.1', '', '', '', '', '', '', ''), ('43438', 'PRADA', 'AKAP6_EGLN3', 'AKAP6', 'chr14', '32903023', '+', 'EGLN3', 'chr14', '34400421', '-', 'Exonic', 'hg19', 'GBM', 'TCGA-06-5413-01A', '', '32', '1', 'In-frame', 'Intra-chr', '14q12', '14q13.1', '', '', '', '', '', '', ''), ('43439', 'PRADA', 'CHD7_TOX', 'CHD7', 'chr8', '61655656', '+', 'TOX', 'chr8', '59872567', '-', 'Exonic', 'hg19', 'GBM', 'TCGA-06-5414-01A', '', '3', '2', 'In-frame', 'Intra-chr', '8q12.2', '8q12.1', '', '', '', '', '', '', ''), ('43440', 'PRADA', 'METTL12_DPF2', 'METTL12', 'chr11', '62433418', '+', 'DPF2', 'chr11', '65119154', '+', 'Exonic', 'hg19', 'GBM', 'TCGA-06-5415-01A', '', '5', '1', 'In-frame', 'Intra-chr', '11q12.3', '11q13.1', '', '', '', '', '', '', ''), ('43441', 'PRADA', 'ARHGAP21_ENKUR', 'ARHGAP21', 'chr10', '24955914', '-', 'ENKUR', 'chr10', '25284798', '-', 'Exonic', 'hg19', 'GBM', 'TCGA-06-5415-01A', '', '2', '1', 'In-frame', 'Intra-chr', '10p12.1', '10p12.1', '', '', '', '', '', '', ''), ('43442', 'PRADA', 'WWOX_C15orf41', 'WWOX', 'chr16', '78198186', '+', 'C15orf41', 'chr15', '37100525', '+', 'Exonic', 'hg19', 'GBM', 'TCGA-06-5415-01A', '', '3', '1', 'Out-of-frame', 'Inter-chr', '16q23.1', '15q14', '', '', '', '', '', '', ''), ('43443', 'PRADA', 'TXNDC15_ARPC2', 'TXNDC15', 'chr5', '134210220', '+', 'ARPC2', 'chr2', '219103387', '+', 'Exonic', 'hg19', 'GBM', 'TCGA-06-5415-01A', '', '22', '1', 'In-frame', 'Inter-chr', '5q31.1', '2q35', '', '', '', '', '', '', ''), ('43444', 'PRADA', 'C6orf204_ROS1', 'C6orf204', 'chr6', '118802942', '-', 'ROS1', 'chr6', '117641193', '-', 'Exonic', 'hg19', 'GBM', 'TCGA-06-5418-01A', '', '5', '1', 'In-frame', 'Intra-chr', '6q22.31', '6q22.1', '', '', '', '', '', '', ''), ('43445', 'PRADA', 'PSPC1_CRYL1', 'PSPC1', 'chr13', '20304379', '-', 'CRYL1', 'chr13', '20987526', '-', 'Exonic', 'hg19', 'GBM', 'TCGA-06-5856-01A', '', '14', '2', 'In-frame', 'Intra-chr', '13q12.11', '13q12.11', '', '', '', '', '', '', ''), ('43446', 'PRADA', 'EFCAB4B_C12orf4', 'EFCAB4B', 'chr12', '3782612', '-', 'C12orf4', 'chr12', '4600400', '-', 'Exonic', 'hg19', 'GBM', 'TCGA-06-5856-01A', '', '6', '1', 'Out-of-frame', 'Intra-chr', '12p13.32', '12p13.32', '', '', '', '', '', '', ''), ('43447', 'PRADA', 'C12orf49_SRRM4', 'C12orf49', 'chr12', '117175595', '-', 'SRRM4', 'chr12', '119583186', '+', 'Exonic', 'hg19', 'GBM', 'TCGA-06-5856-01A', '', '11', '1', 'In-frame', 'Intra-chr', '12q24.22', '12q24.23', '', '', '', '', '', '', ''), ('43448', 'PRADA', 'RPL41_NACA', 'RPL41', 'chr12', '56510995', '+', 'NACA', 'chr12', '57108471', '-', 'Exonic', 'hg19', 'GBM', 'TCGA-06-5856-01A', '', '4', '2', 'Out-of-frame', 'Intra-chr', '12q13.2', '12q13.3', '', '', '', '', '', '', ''), ('43449', 'PRADA', 'NUDT16L1_FAHD1', 'NUDT16L1', 'chr16', '4744239', '+', 'FAHD1', 'chr16', '1888017', '+', 'Exonic', 'hg19', 'GBM', 'TCGA-06-5856-01A', '', '3', '3', 'In-frame', 'Intra-chr', '16p13.3', '16p13.3', '', '', '', '', '', '', ''), ('43450', 'PRADA', 'CTDSP2_MDM2', 'CTDSP2', 'chr12', '58240155', '-', 'MDM2', 'chr12', '69202988', '+', 'Exonic', 'hg19', 'GBM', 'TCGA-06-5856-01A', '', '9', '2', 'Out-of-frame', 'Intra-chr', '12q14.1', '12q15', '', '', '', '', '', '', ''), ('43451', 'PRADA', 'TMEM120B_AVIL', 'TMEM120B', 'chr12', '122150870', '+', 'AVIL', 'chr12', '58193703', '-', 'Exonic', 'hg19', 'GBM', 'TCGA-06-5856-01A', '', '15', '1', 'In-frame', 'Intra-chr', '12q24.31', '12q14.1', '', '', '', '', '', '', ''), ('43452', 'PRADA', 'C12orf49_SLC35E3', 'C12orf49', 'chr12', '117175595', '-', 'SLC35E3', 'chr12', '69145812', '+', 'Exonic', 'hg19', 'GBM', 'TCGA-06-5856-01A', '', '3', '1', 'In-frame', 'Intra-chr', '12q24.22', '12q15', '', '', '', '', '', '', ''), ('43453', 'PRADA', 'SETD1B_KDM2B', 'SETD1B', 'chr12', '122248741', '+', 'KDM2B', 'chr12', '122013764', '-', 'Exonic', 'hg19', 'GBM', 'TCGA-06-5856-01A', '', '25', '2', 'Out-of-frame', 'Intra-chr', '12q24.31', '12q24.31', '', '', '', '', '', '', ''), ('43454', 'PRADA', 'C12orf49_MDM2', 'C12orf49', 'chr12', '117175595', '-', 'MDM2', 'chr12', '69229609', '+', 'Exonic', 'hg19', 'GBM', 'TCGA-06-5856-01A', '', '21', '2', 'In-frame', 'Intra-chr', '12q24.22', '12q15', '', '', '', '', '', '', ''), ('43455', 'PRADA', 'KDM2B_KSR2', 'KDM2B', 'chr12', '121986782', '-', 'KSR2', 'chr12', '118298236', '-', 'Exonic', 'hg19', 'GBM', 'TCGA-06-5856-01A', '', '7', '3', 'Out-of-frame', 'Intra-chr', '12q24.31', '12q24.23', 'Kinase', '', '', '', '', '', ''), ('43456', 'PRADA', 'SRM_SMEK1', 'SRM', 'chr1', '11118857', '-', 'SMEK1', 'chr14', '91957146', '-', 'Exonic', 'hg19', 'GBM', 'TCGA-08-0386-01A', '', '3', '1', 'Out-of-frame', 'Inter-chr', '1p36.22', '14q32.12', '', '', '', '', '', '', ''), ('43457', 'PRADA', 'MED4_HTR2A', 'MED4', 'chr13', '48653980', '-', 'HTR2A', 'chr13', '47409774', '-', 'Exonic', 'hg19', 'GBM', 'TCGA-12-0619-01A', '', '3', '1', 'In-frame', 'Intra-chr', '13q14.2', '13q14.2', '', '', '', 'Receptor', 'Transcription_Factor', '', ''), ('43458', 'PRADA', 'NFX1_C9orf24', 'NFX1', 'chr9', '33295425', '+', 'C9orf24', 'chr9', '34382867', '-', 'Exonic', 'hg19', 'GBM', 'TCGA-12-3652-01A', '', '6', '1', 'In-frame', 'Intra-chr', '9p13.3', '9p13.3', '', '', '', '', '', '', ''), ('43459', 'PRADA', 'SDC4_SPCS1', 'SDC4', 'chr20', '43976965', '-', 'SPCS1', 'chr3', '52740660', '+', 'Exonic', 'hg19', 'GBM', 'TCGA-12-5295-01A', '', '55', '1', 'In-frame', 'Inter-chr', '20q13.12', '3p21.1', '', '', '', '', '', '', '');
